RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 SLC26A1Q9H2B4 701 aa12.35□□□□□ -0.43
CACNB3-209ENST00000548860 HS3ST3B1Q9Y662 390 aa12.35□□□□□ -0.43
CACNB3-209ENST00000548860 DNASE2O00115 360 aaPredicted RBP12.35□□□□□ -0.43
CACNB3-209ENST00000548860 ISG15P05161 165 aa12.35□□□□□ -0.43
CACNB3-209ENST00000548860 APLNRP35414 380 aa12.35□□□□□ -0.43
CACNB3-209ENST00000548860 THBS4P35443 961 aa12.35□□□□□ -0.43
CACNB3-209ENST00000548860 RAB1AP62820 205 aa12.35□□□□□ -0.43
CACNB3-209ENST00000548860 ARL6IP1Q15041 203 aa12.35□□□□□ -0.43
CACNB3-209ENST00000548860 ACER2Q5QJU3 275 aa12.35□□□□□ -0.43
CACNB3-209ENST00000548860 SH3BGRL2Q9UJC5 107 aa12.35□□□□□ -0.43
CACNB3-209ENST00000548860 CD74P04233 296 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 HOXC12P31275 282 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 SUMO3P55854 103 aaPredicted RBP12.34□□□□□ -0.43
CACNB3-209ENST00000548860 RPL23AP62750 156 aaKnown RBP12.34□□□□□ -0.43
CACNB3-209ENST00000548860 AWAT1Q58HT5 328 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 FDX2Q6P4F2 183 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 SLC25A47Q6Q0C1 308 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 FANCFQ9NPI8 374 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 CCL28Q9NRJ3 127 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 ERRFI1Q9UJM3 462 aaPredicted RBP12.34□□□□□ -0.43
CACNB3-209ENST00000548860 H2AFB1P0C5Y9 115 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 GSK3AP49840 483 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 PSG4Q00888 419 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 CXorf66Q5JRM2 361 aaPredicted RBP12.34□□□□□ -0.43
CACNB3-209ENST00000548860 WDR74Q6RFH5 385 aaPredicted RBP12.34□□□□□ -0.43
CACNB3-209ENST00000548860 LILRB1Q8NHL6 650 aaPredicted RBP12.34□□□□□ -0.43
CACNB3-209ENST00000548860 MED9Q9NWA0 146 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 DUSP13Q9UII6 198 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 ZNF816-ZNF321PA0A0X1KG74 233 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 CLDN1O95832 211 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 CELA3AP09093 270 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 SCTP09683 121 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 FLI1Q01543 452 aaPredicted RBP12.34□□□□□ -0.43
CACNB3-209ENST00000548860 C21orf62-AS1Q17RA5 79 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 LYZL4Q96KX0 146 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 RTBDNQ9BSG5 229 aaPredicted RBP12.34□□□□□ -0.43
CACNB3-209ENST00000548860 MMP26Q9NRE1 261 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 DEFB108AA8MXU0 73 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 DUSP3P51452 185 aaPredicted RBP12.34□□□□□ -0.43
CACNB3-209ENST00000548860 ZNF133P52736 654 aaPredicted RBP12.34□□□□□ -0.43
CACNB3-209ENST00000548860 PMP22Q01453 160 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 FABP9Q0Z7S8 132 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 SLC35G3Q8N808 338 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 NRIP2Q9BQI9 281 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 ARRDC1-AS1Q9H2J1 176 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 SLC7A10Q9NS82 523 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 B4GALT7Q9UBV7 327 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 LOXL2Q9Y4K0 774 aa12.34□□□□□ -0.43
CACNB3-209ENST00000548860 TTLL8A6PVC2 850 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 NGFP01138 241 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 BCL3P20749 454 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 PPP1CCP36873 323 aaKnown RBP12.33□□□□□ -0.44
CACNB3-209ENST00000548860 RAB13P51153 203 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 UBE2NP61088 152 aaKnown RBP12.33□□□□□ -0.44
CACNB3-209ENST00000548860 ZNF154Q13106 437 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 EIF2S3LQ2VIR3 472 aaKnown RBP12.33□□□□□ -0.44
CACNB3-209ENST00000548860 DHRS13Q6UX07 377 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 KMT5CQ86Y97 462 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 SKA3Q8IX90 412 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 FGFBP3Q8TAT2 258 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 PRELID3BQ9Y3B1 194 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 ARHGAP21Q5T5U3 1957 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 NXPH2O95156 264 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 VAMP5O95183 116 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 OR2C1O95371 312 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 METTL15P1P0C7V9 234 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 TBPP20226 339 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 HIST2H3AQ71DI3 136 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 TPRX1Q8N7U7 411 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 OR10AD1Q8NGE0 317 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 ZNF285Q96NJ3 590 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 OCSTAMPQ9BR26 566 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 ABHD14AQ9BUJ0 271 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 E5RGE8 158 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 ZNF587BE7ETH6 402 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 CST4P01036 141 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 KRASP01116 189 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 MBPP02686 304 aaPredicted RBP12.33□□□□□ -0.44
CACNB3-209ENST00000548860 LIFP15018 202 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 HNF1AP20823 631 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 FABP6P51161 128 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 FOXG1P55316 489 aaPredicted RBP12.33□□□□□ -0.44
CACNB3-209ENST00000548860 KIAA0141Q14154 515 aaPredicted RBP12.33□□□□□ -0.44
CACNB3-209ENST00000548860 GAPTQ8N292 157 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 OR2V1Q8NHB1 315 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 RARRES2Q99969 163 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 UTP23Q9BRU9 249 aaKnown RBP12.33□□□□□ -0.44
CACNB3-209ENST00000548860 NAA60Q9H7X0 242 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 C19orf12Q9NSK7 152 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 NSG2Q9Y328 171 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 LIPGQ9Y5X9 500 aa12.33□□□□□ -0.44
CACNB3-209ENST00000548860 MFNGO00587 321 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 ZNF708P17019 499 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 EXT1Q16394 746 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 PNLIPRP3Q17RR3 467 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 NSUN5P2Q63ZY6 315 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 CALHM1Q8IU99 346 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 NFAM1Q8NET5 270 aaPredicted RBP12.32□□□□□ -0.44
CACNB3-209ENST00000548860 CHST5Q9GZS9 411 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 LTBP2Q14767 1821 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms