RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 SERPINA2P20848 420 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 CAPZA1P52907 286 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 PAX8Q06710 450 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 GPR176Q14439 515 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 PIGYQ3MUY2 71 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 NHLRC3Q5JS37 347 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 BTNL3Q6UXE8 466 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 C17orf107Q6ZR85 190 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 OSR2Q8N2R0 312 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 ASCC1Q8N9N2 400 aaKnown RBP16.94■□□□□ 0.3
HMGA2-211ENST00000545998 LY6G5BQ8NDX9 201 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 YIPF6Q96EC8 236 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 CHCHD6Q9BRQ6 235 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 DCTN5Q9BTE1 182 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 MRPS26Q9BYN8 205 aaKnown RBP16.94■□□□□ 0.3
HMGA2-211ENST00000545998 SHARPINQ9H0F6 387 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 PCDHB16Q9NRJ7 776 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 A0A1W2PP11 408 aa16.93■□□□□ 0.3
HMGA2-211ENST00000545998 PSPNO60542 156 aa16.93■□□□□ 0.3
HMGA2-211ENST00000545998 AVPP01185 164 aa16.93■□□□□ 0.3
HMGA2-211ENST00000545998 MYL9P24844 172 aa16.93■□□□□ 0.3
HMGA2-211ENST00000545998 LMO1P25800 156 aa16.93■□□□□ 0.3
HMGA2-211ENST00000545998 IL13RA2Q14627 380 aa16.93■□□□□ 0.3
HMGA2-211ENST00000545998 C8orf46Q8TAG6 207 aa16.93■□□□□ 0.3
HMGA2-211ENST00000545998 H1FXQ92522 213 aaKnown RBP16.93■□□□□ 0.3
HMGA2-211ENST00000545998 SNX22Q96L94 193 aa16.93■□□□□ 0.3
HMGA2-211ENST00000545998 C7orf69Q9H7B7 122 aa16.93■□□□□ 0.3
HMGA2-211ENST00000545998 GHRLQ9UBU3 117 aa16.93■□□□□ 0.3
HMGA2-211ENST00000545998 OPN4Q9UHM6 478 aa16.93■□□□□ 0.3
HMGA2-211ENST00000545998 ST3GAL6Q9Y274 331 aa16.93■□□□□ 0.3
HMGA2-211ENST00000545998 SLC17A2O00624 439 aa16.92■□□□□ 0.3
HMGA2-211ENST00000545998 PDCD5O14737 125 aa16.92■□□□□ 0.3
HMGA2-211ENST00000545998 GTF2F2P13984 249 aa16.92■□□□□ 0.3
HMGA2-211ENST00000545998 HTR2CP28335 458 aa16.92■□□□□ 0.3
HMGA2-211ENST00000545998 PSMD7P51665 324 aa16.92■□□□□ 0.3
HMGA2-211ENST00000545998 RBM11P57052 281 aaKnown RBP16.92■□□□□ 0.3
HMGA2-211ENST00000545998 PDCD1Q15116 288 aa16.92■□□□□ 0.3
HMGA2-211ENST00000545998 C1orf229Q6ZS94 237 aaPredicted RBP16.92■□□□□ 0.3
HMGA2-211ENST00000545998 OR8H2Q8N162 312 aa16.92■□□□□ 0.3
HMGA2-211ENST00000545998 OR6M1Q8NGM8 313 aa16.92■□□□□ 0.3
HMGA2-211ENST00000545998 SLC25A28Q96A46 364 aa16.92■□□□□ 0.3
HMGA2-211ENST00000545998 V9GY05 133 aa16.92■□□□□ 0.3
HMGA2-211ENST00000545998 SIRPB1O00241 398 aa16.91■□□□□ 0.3
HMGA2-211ENST00000545998 LIPFP07098 398 aa16.91■□□□□ 0.3
HMGA2-211ENST00000545998 UBBP0CG47 229 aa16.91■□□□□ 0.3
HMGA2-211ENST00000545998 GABRR1P24046 479 aa16.91■□□□□ 0.3
HMGA2-211ENST00000545998 CHST4Q8NCG5 386 aa16.91■□□□□ 0.3
HMGA2-211ENST00000545998 OR13F1Q8NGS4 319 aa16.91■□□□□ 0.3
HMGA2-211ENST00000545998 MRPS24Q96EL2 167 aaKnown RBP16.91■□□□□ 0.3
HMGA2-211ENST00000545998 CDC42EP3Q9UKI2 254 aa16.91■□□□□ 0.3
HMGA2-211ENST00000545998 TRBV23-1A0A0A0MS06 115 aa16.9■□□□□ 0.3
HMGA2-211ENST00000545998 A0A0G2JK05 382 aa16.9■□□□□ 0.3
HMGA2-211ENST00000545998 LOC100506127A0A0U1RQW1 187 aa16.9■□□□□ 0.3
HMGA2-211ENST00000545998 SLC33A1O00400 549 aaPredicted RBP16.9■□□□□ 0.3
HMGA2-211ENST00000545998 DEGS1O15121 323 aa16.9■□□□□ 0.3
HMGA2-211ENST00000545998 ZNF44P15621 663 aa16.9■□□□□ 0.3
HMGA2-211ENST00000545998 OR3A1P47881 315 aa16.9■□□□□ 0.3
HMGA2-211ENST00000545998 SCN1BQ07699 218 aa16.9■□□□□ 0.3
HMGA2-211ENST00000545998 IL17RELQ6ZVW7 336 aa16.9■□□□□ 0.3
HMGA2-211ENST00000545998 TMEM104Q8NE00 496 aa16.9■□□□□ 0.3
HMGA2-211ENST00000545998 OR5D13Q8NGL4 314 aa16.9■□□□□ 0.3
HMGA2-211ENST00000545998 DMRTB1Q96MA1 342 aa16.9■□□□□ 0.3
HMGA2-211ENST00000545998 KCTD7Q96MP8 289 aa16.9■□□□□ 0.3
HMGA2-211ENST00000545998 MRI1Q9BV20 369 aa16.9■□□□□ 0.3
HMGA2-211ENST00000545998 CHST6Q9GZX3 395 aa16.9■□□□□ 0.3
HMGA2-211ENST00000545998 RNF167Q9H6Y7 350 aa16.9■□□□□ 0.3
HMGA2-211ENST00000545998 PLGRKTQ9HBL7 147 aa16.9■□□□□ 0.3
HMGA2-211ENST00000545998 LPAR3Q9UBY5 353 aa16.9■□□□□ 0.3
HMGA2-211ENST00000545998 GEMIN2O14893 280 aaKnown RBP16.89■□□□□ 0.3
HMGA2-211ENST00000545998 PPIAL4GP0DN37 164 aa16.89■□□□□ 0.3
HMGA2-211ENST00000545998 RAB3BP20337 219 aa16.89■□□□□ 0.3
HMGA2-211ENST00000545998 HNF1AP20823 631 aa16.89■□□□□ 0.3
HMGA2-211ENST00000545998 OR10A3P58181 314 aa16.89■□□□□ 0.3
HMGA2-211ENST00000545998 TIMM50Q3ZCQ8 353 aa16.89■□□□□ 0.3
HMGA2-211ENST00000545998 GDPGP1Q6ZNW5 385 aa16.89■□□□□ 0.3
HMGA2-211ENST00000545998 LINC00596Q86U02 117 aa16.89■□□□□ 0.3
HMGA2-211ENST00000545998 OR4S1Q8NGB4 309 aa16.89■□□□□ 0.3
HMGA2-211ENST00000545998 CENPOQ9BU64 300 aa16.89■□□□□ 0.3
HMGA2-211ENST00000545998 BANF2Q9H503 90 aa16.89■□□□□ 0.3
HMGA2-211ENST00000545998 IFT22Q9H7X7 185 aa16.89■□□□□ 0.3
HMGA2-211ENST00000545998 C19orf12Q9NSK7 152 aa16.89■□□□□ 0.3
HMGA2-211ENST00000545998 ZNF581Q9P0T4 197 aa16.89■□□□□ 0.3
HMGA2-211ENST00000545998 AUP1Q9Y679 476 aa16.89■□□□□ 0.3
HMGA2-211ENST00000545998 TRAV24A0A0B4J272 114 aa16.89■□□□□ 0.29
HMGA2-211ENST00000545998 CRLF1O75462 422 aa16.89■□□□□ 0.29
HMGA2-211ENST00000545998 CRTAPO75718 401 aaPredicted RBP16.89■□□□□ 0.29
HMGA2-211ENST00000545998 BPNT1O95861 308 aa16.89■□□□□ 0.29
HMGA2-211ENST00000545998 VSIG8P0DPA2 414 aa16.89■□□□□ 0.29
HMGA2-211ENST00000545998 MGMTP16455 207 aa16.89■□□□□ 0.29
HMGA2-211ENST00000545998 CFPP27918 469 aa16.89■□□□□ 0.29
HMGA2-211ENST00000545998 GRK1Q15835 563 aa16.89■□□□□ 0.29
HMGA2-211ENST00000545998 RAB11BQ15907 218 aa16.89■□□□□ 0.29
HMGA2-211ENST00000545998 NR2C2APQ86WQ0 139 aa16.89■□□□□ 0.29
HMGA2-211ENST00000545998 BEX2Q9BXY8 128 aa16.89■□□□□ 0.29
HMGA2-211ENST00000545998 CST11Q9H112 138 aa16.89■□□□□ 0.29
HMGA2-211ENST00000545998 MGST3O14880 152 aa16.88■□□□□ 0.29
HMGA2-211ENST00000545998 TFAP2AP05549 437 aa16.88■□□□□ 0.29
HMGA2-211ENST00000545998 RPL31P62899 125 aaKnown RBP16.88■□□□□ 0.29
HMGA2-211ENST00000545998 QRFPP83859 136 aa16.88■□□□□ 0.29
HMGA2-211ENST00000545998 P2RY14Q15391 338 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms