RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 OR10D3Q8NH80 312 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 HPSE2Q8WWQ2 592 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 NAT6Q93015 286 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 HIST1H2BAQ96A08 127 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 SUCNR1Q9BXA5 334 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 ARV1Q9H2C2 271 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 CRIM1Q9NZV1 1036 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 SLC7A11Q9UPY5 501 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 C7orf77A4D0Y5 90 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 NKX2-6A6NCS4 301 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 FAM24AA6NFZ4 105 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 C3orf80F5H4A9 247 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 HSPB6O14558 160 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 ST8SIA3O43173 380 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 PDCD6O75340 191 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 NXPH3O95157 252 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 OTX2P32243 289 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 PPP1CCP36873 323 aaKnown RBP13.64□□□□□ -0.23
LDLR-204ENST00000545707 P2RY1P47900 373 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 Q0VFX4 171 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 LGI3Q8N145 548 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 ZNF611Q8N823 705 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 CPEB3Q8NE35 698 aaKnown RBP13.64□□□□□ -0.23
LDLR-204ENST00000545707 CCDC54Q8NEL0 328 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 CPT1CQ8TCG5 803 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 MOB3AQ96BX8 217 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 ABHD14AQ9BUJ0 271 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 SF3B5Q9BWJ5 86 aaKnown RBP13.64□□□□□ -0.23
LDLR-204ENST00000545707 MAGT1Q9H0U3 335 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 RGCCQ9H4X1 137 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 C19orf12Q9NSK7 152 aa13.64□□□□□ -0.23
LDLR-204ENST00000545707 BORCS7-ASMTA0A0B4J1R7 106 aa13.63□□□□□ -0.23
LDLR-204ENST00000545707 P04436 131 aa13.63□□□□□ -0.23
LDLR-204ENST00000545707 SEC11BP0C7V7 166 aa13.63□□□□□ -0.23
LDLR-204ENST00000545707 FUT6P51993 359 aa13.63□□□□□ -0.23
LDLR-204ENST00000545707 HERV-K104P61576 105 aa13.63□□□□□ -0.23
LDLR-204ENST00000545707 MAFAQ8NHW3 353 aaPredicted RBP13.63□□□□□ -0.23
LDLR-204ENST00000545707 NTNG2Q96CW9 530 aa13.63□□□□□ -0.23
LDLR-204ENST00000545707 GINS3Q9BRX5 216 aa13.63□□□□□ -0.23
LDLR-204ENST00000545707 IL36RNQ9UBH0 155 aa13.63□□□□□ -0.23
LDLR-204ENST00000545707 PILRBQ9UKJ0 227 aa13.63□□□□□ -0.23
LDLR-204ENST00000545707 KPTNQ9Y664 436 aa13.63□□□□□ -0.23
LDLR-204ENST00000545707 NCKAP5O14513 1909 aa13.63□□□□□ -0.23
LDLR-204ENST00000545707 A0A1W2PPE3 182 aa13.63□□□□□ -0.23
LDLR-204ENST00000545707 A6NLC8 198 aa13.63□□□□□ -0.23
LDLR-204ENST00000545707 EIF3GO75821 320 aaKnown RBP eCLIP13.63□□□□□ -0.23
LDLR-204ENST00000545707 PPYP01298 95 aa13.63□□□□□ -0.23
LDLR-204ENST00000545707 ARG1P05089 322 aa13.63□□□□□ -0.23
LDLR-204ENST00000545707 OR13C7P0DN81 318 aa13.63□□□□□ -0.23
LDLR-204ENST00000545707 ZNF44P15621 663 aa13.63□□□□□ -0.23
LDLR-204ENST00000545707 RBM11P57052 281 aaKnown RBP13.63□□□□□ -0.23
LDLR-204ENST00000545707 POLR2GP62487 172 aaKnown RBP eCLIP13.63□□□□□ -0.23
LDLR-204ENST00000545707 KRBOX4Q5JUW0 171 aa13.63□□□□□ -0.23
LDLR-204ENST00000545707 LRTM2Q8N967 370 aa13.63□□□□□ -0.23
LDLR-204ENST00000545707 FAM213BQ8TBF2 198 aa13.63□□□□□ -0.23
LDLR-204ENST00000545707 SYT3Q9BQG1 590 aa13.63□□□□□ -0.23
LDLR-204ENST00000545707 DEPPQ9NTK1 212 aa13.63□□□□□ -0.23
LDLR-204ENST00000545707 LUZP4Q9P127 313 aa13.63□□□□□ -0.23
LDLR-204ENST00000545707 A0A096LPE4 126 aa13.62□□□□□ -0.23
LDLR-204ENST00000545707 A0A1W2PPH5 198 aa13.62□□□□□ -0.23
LDLR-204ENST00000545707 A0A1W2PPZ6 126 aa13.62□□□□□ -0.23
LDLR-204ENST00000545707 PINLYPA6NC86 204 aa13.62□□□□□ -0.23
LDLR-204ENST00000545707 GJE1A6NN92 205 aa13.62□□□□□ -0.23
LDLR-204ENST00000545707 GLAP06280 429 aa13.62□□□□□ -0.23
LDLR-204ENST00000545707 GLP1RP43220 463 aa13.62□□□□□ -0.23
LDLR-204ENST00000545707 SPIN3Q5JUX0 258 aa13.62□□□□□ -0.23
LDLR-204ENST00000545707 CD300LFQ8TDQ1 290 aa13.62□□□□□ -0.23
LDLR-204ENST00000545707 RARRES2Q99969 163 aa13.62□□□□□ -0.23
LDLR-204ENST00000545707 USB1Q9BQ65 265 aaKnown RBP13.62□□□□□ -0.23
LDLR-204ENST00000545707 GPR35Q9HC97 309 aa13.62□□□□□ -0.23
LDLR-204ENST00000545707 SLC7A10Q9NS82 523 aa13.62□□□□□ -0.23
LDLR-204ENST00000545707 POMT1Q9Y6A1 747 aa13.62□□□□□ -0.23
LDLR-204ENST00000545707 C3orf85A0A1B0GTC6 90 aa13.62□□□□□ -0.23
LDLR-204ENST00000545707 GPR37O15354 613 aa13.62□□□□□ -0.23
LDLR-204ENST00000545707 FUT3P21217 361 aa13.62□□□□□ -0.23
LDLR-204ENST00000545707 ITGA3P26006 1051 aa13.62□□□□□ -0.23
LDLR-204ENST00000545707 GNRHRP30968 328 aa13.62□□□□□ -0.23
LDLR-204ENST00000545707 SRD5A2P31213 254 aa13.62□□□□□ -0.23
LDLR-204ENST00000545707 FOLR3P41439 243 aa13.62□□□□□ -0.23
LDLR-204ENST00000545707 MEOX2P50222 304 aa13.62□□□□□ -0.23
LDLR-204ENST00000545707 RBMS3Q6XE24 437 aaKnown RBP13.62□□□□□ -0.23
LDLR-204ENST00000545707 SLAMF9Q96A28 289 aa13.62□□□□□ -0.23
LDLR-204ENST00000545707 PQLC2LA1A4F0 135 aa13.61□□□□□ -0.23
LDLR-204ENST00000545707 LRRC3CA6NJW4 275 aa13.61□□□□□ -0.23
LDLR-204ENST00000545707 MPPED1O15442 326 aa13.61□□□□□ -0.23
LDLR-204ENST00000545707 CCL20P78556 96 aa13.61□□□□□ -0.23
LDLR-204ENST00000545707 EWSR1Q01844 656 aaKnown RBP eCLIP13.61□□□□□ -0.236e-6■■■■□ 22.1
LDLR-204ENST00000545707 GPR157Q5UAW9 335 aa13.61□□□□□ -0.23
LDLR-204ENST00000545707 OR4D5Q8NGN0 318 aa13.61□□□□□ -0.23
LDLR-204ENST00000545707 RSRP1Q9BUV0 290 aa13.61□□□□□ -0.23
LDLR-204ENST00000545707 ZNF816-ZNF321PA0A0X1KG74 233 aa13.61□□□□□ -0.23
LDLR-204ENST00000545707 hCG_1809904A0A1W2PP81 198 aa13.61□□□□□ -0.23
LDLR-204ENST00000545707 A0A1W2PR64 198 aa13.61□□□□□ -0.23
LDLR-204ENST00000545707 A0A1W2PRV1 198 aa13.61□□□□□ -0.23
LDLR-204ENST00000545707 CDRT15L2A8MXV6 281 aa13.61□□□□□ -0.23
LDLR-204ENST00000545707 UMAD1C9J7I0 102 aa13.61□□□□□ -0.23
LDLR-204ENST00000545707 ACAA1P09110 424 aaPredicted RBP13.61□□□□□ -0.23
LDLR-204ENST00000545707 SCTP09683 121 aa13.61□□□□□ -0.23
LDLR-204ENST00000545707 BCL3P20749 454 aa13.61□□□□□ -0.23
LDLR-204ENST00000545707 PTAFRP25105 342 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms