RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	NANOS3	P60323	173 aa	Known RBP	6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	RPL31	P62899	125 aa	Known RBP	6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	ACSM1	Q08AH1	577 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	RAB40B	Q12829	278 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	MRPL28	Q13084	256 aa	Known RBP	6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	FIP1L1	Q6UN15	594 aa	Known RBP	6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	ZBTB49	Q6ZSB9	765 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	PDZD9	Q8IXQ8	264 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440		Q8IYB0	196 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	FAM185A	Q8N0U4	392 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	OR4F5	Q8NH21	305 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	HAVCR2	Q8TDQ0	301 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	STMN2	Q93045	179 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	SPSB1	Q96BD6	273 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	LGALS12	Q96DT0	336 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	ADAT3	Q96EY9	351 aa	Predicted RBP	6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	PELI1	Q96FA3	418 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	BORCS8	Q96FH0	119 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	C4orf36	Q96KX1	117 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	CEP19	Q96LK0	163 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	SLC29A1	Q99808	456 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	ALG8	Q9BVK2	526 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	SLITRK2	Q9H156	845 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	DPAGT1	Q9H3H5	408 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	C8orf4	Q9NR00	106 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	C19orf12	Q9NSK7	152 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	SMPD3	Q9NY59	655 aa	Predicted RBP	6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	HHLA2	Q9UM44	414 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	FAM96B	Q9Y3D0	163 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	hCG_1809904	A0A1W2PP81	198 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440		A0A1W2PPE2	198 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440		A0A1W2PR64	198 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440		A0A1W2PRV1	198 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	BTBD17	A6NE02	478 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	OR4C45	A6NMZ5	311 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440		H0YAE9	185 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440		H3BSH0	61 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440		K7N7A8	449 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	GPR137B	O60478	399 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	ZNF737	O75373	536 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	PAH	P00439	452 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	IGHV4-59	P01825	116 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	RBP4	P02753	201 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	TK1	P04183	234 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	CRYBA1	P05813	215 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	ZNF20	P17024	532 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	MDK	P21741	143 aa	Predicted RBP	6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	PRKACB	P22694	351 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	AZGP1	P25311	298 aa	Known RBP	6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	SAA4	P35542	130 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	CEBPD	P49716	269 aa	Predicted RBP	6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	RAG2	P55895	527 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	NHLH2	Q02577	135 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	KLRD1	Q13241	179 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	ALKBH1	Q13686	389 aa	Known RBP	6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	GALE	Q14376	348 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	MIDN	Q504T8	468 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	GDPGP1	Q6ZNW5	385 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	SLC25A26	Q70HW3	274 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	ANGPTL5	Q86XS5	388 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	RDH10	Q8IZV5	341 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	OR5R1	Q8NH85	324 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	RHOXF1	Q8NHV9	184 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	APH1B	Q8WW43	257 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	OPALIN	Q96PE5	141 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	SEBOX	Q9HB31	216 aa	Predicted RBP	6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	MRPS18A	Q9NVS2	196 aa	Known RBP	6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	FAM118A	Q9NWS6	357 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	MTCH1	Q9NZJ7	389 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	AASS	Q9UDR5	926 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	OR14J1	Q9UGF5	321 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	VPREB3	Q9UKI3	123 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	MYRF	Q9Y2G1	1151 aa		6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	RPL36	Q9Y3U8	105 aa	Known RBP	6.26	□□□□□ -1.41
SNHG1-223	ENST00000545440	MGAM2	Q2M2H8	2515 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	IGKV1-9	A0A0C4DH69	117 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	TRBV2	A0A0J9YWF9	115 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	MEIOC	A2RUB1	952 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	TMEM212	A6NML5	194 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440		F8VVB4	439 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440		F8VWA3	439 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440		J3QLW9	94 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	ANGPTL7	O43827	346 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	CYB5A	P00167	134 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	MT-ND2	P03891	347 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	CHRM2	P08172	466 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	CCDC159	P0C7I6	412 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	ZNF19	P17023	458 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	ATF1	P18846	271 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	HOXA5	P20719	270 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	POU3F4	P49335	361 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	ATP1B3	P54709	279 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	DLX1	P56177	255 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	MTCP1	P56278	107 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	COL10A1	Q03692	680 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	PRB3	Q04118	309 aa	Predicted RBP	6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	ZNF273	Q14593	569 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	TAF9	Q16594	264 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	SPIN3	Q5JUX0	258 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	LPCAT4	Q643R3	524 aa		6.25	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms