RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 C4orf3Q8WVX3 66 aa7.31□□□□□ -1.24
CHD4-212ENST00000545083 TOMM40LQ969M1 308 aa7.31□□□□□ -1.24
CHD4-212ENST00000545083 ITFG2Q969R8 447 aa7.31□□□□□ -1.24
CHD4-212ENST00000545083 GORASP2Q9H8Y8 452 aa7.31□□□□□ -1.24
CHD4-212ENST00000545083 ISYNA1Q9NPH2 558 aa7.31□□□□□ -1.24
CHD4-212ENST00000545083 IL1RAPQ9NPH3 570 aa7.31□□□□□ -1.24
CHD4-212ENST00000545083 SIRT4Q9Y6E7 314 aaPredicted RBP7.31□□□□□ -1.24
CHD4-212ENST00000545083 V9GYS6 101 aa7.31□□□□□ -1.24
CHD4-212ENST00000545083 A0A087X0M5 115 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 A0A1B0GTI1 187 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 A0A1B0GX30 115 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 FAM230AA0A1W2PPH8 454 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 AP4M1O00189 453 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 TNFRSF11BO00300 401 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 TOR1AO14656 332 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 LDLRAD4O15165 306 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 IGKV1D-33P01593 117 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 IGKV1-33P01594 117 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 ELANEP08246 267 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 CALCBP10092 127 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 GP9P14770 177 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 GLIPR1P48060 266 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 SNU13P55769 128 aaKnown RBP7.3□□□□□ -1.24
CHD4-212ENST00000545083 ZSCAN26Q16670 478 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 FAM27D1Q5T7N8 215 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 FAM53AQ6NSI3 398 aaPredicted RBP7.3□□□□□ -1.24
CHD4-212ENST00000545083 HACD2Q6Y1H2 254 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 LHFPL2Q6ZUX7 228 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 OR14K1Q8NGZ2 314 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 CORO2AQ92828 525 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 EMG1Q92979 244 aaKnown RBP7.3□□□□□ -1.24
CHD4-212ENST00000545083 MCUR1Q96AQ8 359 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 RPEQ96AT9 228 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 CREB3L1Q96BA8 519 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 TTTY10Q9BZA0 68 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 GAL3ST2Q9H3Q3 398 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 GNB4Q9HAV0 340 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 SEBOXQ9HB31 216 aaPredicted RBP7.3□□□□□ -1.24
CHD4-212ENST00000545083 RBFOX1Q9NWB1 397 aaKnown RBP7.3□□□□□ -1.24
CHD4-212ENST00000545083 TAS2R3Q9NYW6 316 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 NUFIP1Q9UHK0 495 aaKnown RBP7.3□□□□□ -1.24
CHD4-212ENST00000545083 LAMP5Q9UJQ1 280 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 SLC7A11Q9UPY5 501 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 KIAA1109Q2LD37 5005 aa7.3□□□□□ -1.24
CHD4-212ENST00000545083 DNAH10Q8IVF4 4471 aa7.29□□□□□ -1.24
CHD4-212ENST00000545083 TRGV10A0A0A0MS01 117 aa7.29□□□□□ -1.24
CHD4-212ENST00000545083 PRR23D1E9PI22 279 aaPredicted RBP7.29□□□□□ -1.24
CHD4-212ENST00000545083 SIRPB1O00241 398 aa7.29□□□□□ -1.24
CHD4-212ENST00000545083 NDUFAB1O14561 156 aa7.29□□□□□ -1.24
CHD4-212ENST00000545083 SRSF10O75494 262 aaKnown RBP7.29□□□□□ -1.24
CHD4-212ENST00000545083 CCNB2O95067 398 aa7.29□□□□□ -1.24
CHD4-212ENST00000545083 IGHV3-7P01780 117 aa7.29□□□□□ -1.24
CHD4-212ENST00000545083 IGHG4P01861 327 aa7.29□□□□□ -1.24
CHD4-212ENST00000545083 PRR23D2P0DMB1 279 aaPredicted RBP7.29□□□□□ -1.24
CHD4-212ENST00000545083 NPBWR2P48146 333 aa7.29□□□□□ -1.24
CHD4-212ENST00000545083 PRRX1P54821 245 aa7.29□□□□□ -1.24
CHD4-212ENST00000545083 AESQ08117 197 aa7.29□□□□□ -1.24
CHD4-212ENST00000545083 SRSF7Q16629 238 aaKnown RBP eCLIP7.29□□□□□ -1.24
CHD4-212ENST00000545083 C17orf58Q2M2W7 97 aa7.29□□□□□ -1.24
CHD4-212ENST00000545083 SLX4IPQ5VYV7 408 aa7.29□□□□□ -1.24
CHD4-212ENST00000545083 SLC25A26Q70HW3 274 aa7.29□□□□□ -1.24
CHD4-212ENST00000545083 ZNF429Q86V71 674 aa7.29□□□□□ -1.24
CHD4-212ENST00000545083 BBS1Q8NFJ9 593 aa7.29□□□□□ -1.24
CHD4-212ENST00000545083 DCUN1D4Q92564 292 aa7.29□□□□□ -1.24
CHD4-212ENST00000545083 LEAP2Q969E1 77 aa7.29□□□□□ -1.24
CHD4-212ENST00000545083 ABCG5Q9H222 651 aa7.29□□□□□ -1.24
CHD4-212ENST00000545083 EFCAB1Q9HAE3 211 aa7.29□□□□□ -1.24
CHD4-212ENST00000545083 FGFR1OP2Q9NVK5 253 aa7.29□□□□□ -1.24
CHD4-212ENST00000545083 COPS3Q9UNS2 423 aa7.29□□□□□ -1.24
CHD4-212ENST00000545083 ERICH4A6NGS2 130 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 I3L521 148 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 ENTPD6O75354 484 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 SAP30O75446 220 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 GMNNO75496 209 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 KRT36O76013 467 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 IGHV4-30-4P0DP06 118 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 BCL3P20749 454 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 SLC2A5P22732 501 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 MYF6P23409 242 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 NFYBP25208 207 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 PSMB8P28062 276 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 GNB1P62873 340 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 KIAA0141Q14154 515 aaPredicted RBP7.28□□□□□ -1.24
CHD4-212ENST00000545083 KPNB1Q14974 876 aaKnown RBP7.28□□□□□ -1.24
CHD4-212ENST00000545083 UBE2V2Q15819 145 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 DEGS2Q6QHC5 323 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 Q6ZSR3 168 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 TGIF2LXQ8IUE1 241 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 CPOQ8IVL8 374 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 Q8N1Y9 231 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 Q8N9W7 124 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 OR1N2Q8NGR9 330 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 OR9G1Q8NH87 305 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 MYOZ3Q8TDC0 251 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 RBMXL1Q96E39 390 aaKnown RBP7.28□□□□□ -1.24
CHD4-212ENST00000545083 COQ2Q96H96 371 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 KIRREL1Q96J84 757 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 OR5B12Q96R08 314 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 NIPSNAP1Q9BPW8 284 aa7.28□□□□□ -1.24
CHD4-212ENST00000545083 HSPB9Q9BQS6 159 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms