RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 METAP1DQ6UB28 335 aaPredicted RBP6.06□□□□□ -1.44
CPSF7-224ENST00000544990 BRD3OSQ6XYD6 125 aa6.06□□□□□ -1.44
CPSF7-224ENST00000544990 VMO1Q7Z5L0 202 aa6.06□□□□□ -1.44
CPSF7-224ENST00000544990 FAM185AQ8N0U4 392 aa6.06□□□□□ -1.44
CPSF7-224ENST00000544990 FAM58AQ8N1B3 248 aa6.06□□□□□ -1.44
CPSF7-224ENST00000544990 BATF2Q8N1L9 274 aa6.06□□□□□ -1.44
CPSF7-224ENST00000544990 STX19Q8N4C7 294 aa6.06□□□□□ -1.44
CPSF7-224ENST00000544990 PARP16Q8N5Y8 322 aa6.06□□□□□ -1.44
CPSF7-224ENST00000544990 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.06□□□□□ -1.44
CPSF7-224ENST00000544990 ZDHHC22Q8N966 263 aa6.06□□□□□ -1.44
CPSF7-224ENST00000544990 ZSCAN4Q8NAM6 433 aaPredicted RBP6.06□□□□□ -1.44
CPSF7-224ENST00000544990 BPIFB6Q8NFQ5 453 aa6.06□□□□□ -1.44
CPSF7-224ENST00000544990 OR5AN1Q8NGI8 311 aa6.06□□□□□ -1.44
CPSF7-224ENST00000544990 OR5D13Q8NGL4 314 aa6.06□□□□□ -1.44
CPSF7-224ENST00000544990 OR52N1Q8NH53 320 aa6.06□□□□□ -1.44
CPSF7-224ENST00000544990 GPR148Q8TDV2 347 aa6.06□□□□□ -1.44
CPSF7-224ENST00000544990 TFAP2CQ92754 450 aa6.06□□□□□ -1.44
CPSF7-224ENST00000544990 GGHQ92820 318 aa6.06□□□□□ -1.44
CPSF7-224ENST00000544990 GCDHQ92947 438 aaPredicted RBP6.06□□□□□ -1.44
CPSF7-224ENST00000544990 EMG1Q92979 244 aaKnown RBP6.06□□□□□ -1.44
CPSF7-224ENST00000544990 SLAMF9Q96A28 289 aa6.06□□□□□ -1.44
CPSF7-224ENST00000544990 SLC25A28Q96A46 364 aa6.06□□□□□ -1.44
CPSF7-224ENST00000544990 PDCD1LG2Q9BQ51 273 aa6.06□□□□□ -1.44
CPSF7-224ENST00000544990 METTL8Q9H825 291 aaKnown RBP6.06□□□□□ -1.44
CPSF7-224ENST00000544990 SEBOXQ9HB31 216 aaPredicted RBP6.06□□□□□ -1.44
CPSF7-224ENST00000544990 RHOFQ9HBH0 211 aa6.06□□□□□ -1.44
CPSF7-224ENST00000544990 NOX4Q9NPH5 578 aa6.06□□□□□ -1.44
CPSF7-224ENST00000544990 PLCXD1Q9NUJ7 323 aa6.06□□□□□ -1.44
CPSF7-224ENST00000544990 MTCH1Q9NZJ7 389 aa6.06□□□□□ -1.44
CPSF7-224ENST00000544990 CNOT2Q9NZN8 540 aaKnown RBP6.06□□□□□ -1.44
CPSF7-224ENST00000544990 NKX1-2Q9UD57 310 aaPredicted RBP6.06□□□□□ -1.44
CPSF7-224ENST00000544990 PCDHGB5Q9Y5G0 923 aa6.06□□□□□ -1.44
CPSF7-224ENST00000544990 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.06□□□□□ -1.44
CPSF7-224ENST00000544990 MXRA5Q9NR99 2828 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 DNAJC9-AS1A6NH13 148 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 CLDN34H7C241 214 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 K7N7A8 449 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 MYL12BO14950 172 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 OGG1O15527 345 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 SPRY1O43609 319 aaPredicted RBP6.05□□□□□ -1.44
CPSF7-224ENST00000544990 SULT1B1O43704 296 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 XPNPEP2O43895 674 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 GNAO1P09471 354 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 PRKACAP17612 351 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 RAB3AP20336 220 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 CEBPDP49716 269 aaPredicted RBP6.05□□□□□ -1.44
CPSF7-224ENST00000544990 TAS2R43P59537 309 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 RPL31P62899 125 aaKnown RBP6.05□□□□□ -1.44
CPSF7-224ENST00000544990 COL10A1Q03692 680 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 DEFB112Q30KQ8 113 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 SPIN3Q5JUX0 258 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 RUSC1-AS1Q66K80 236 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 NCR3LG1Q68D85 454 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 C12orf54Q6X4T0 127 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 GDPD3Q7L5L3 318 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 SAXO1Q8IYX7 474 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 ASCC1Q8N9N2 400 aaKnown RBP6.05□□□□□ -1.44
CPSF7-224ENST00000544990 PPP1R35Q8TAP8 253 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 RFT1Q96AA3 541 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 SMIM19Q96E16 107 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 SNX22Q96L94 193 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 ZNF48Q96MX3 618 aaPredicted RBP6.05□□□□□ -1.44
CPSF7-224ENST00000544990 GPER1Q99527 375 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 PRDM13Q9H4Q3 707 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 ELL3Q9HB65 397 aaPredicted RBP6.05□□□□□ -1.44
CPSF7-224ENST00000544990 ESM1Q9NQ30 184 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 SIRT7Q9NRC8 400 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 SCN3BQ9NY72 215 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 CLEC2DQ9UHP7 191 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 PSORS1C1Q9UIG5 152 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 FAM96BQ9Y3D0 163 aa6.05□□□□□ -1.44
CPSF7-224ENST00000544990 STAB1Q9NY15 2570 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 FBN1P35555 2871 aaKnown RBP6.04□□□□□ -1.44
CPSF7-224ENST00000544990 TMEM89A2RUT3 159 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 F8VVB4 439 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 F8VWA3 439 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 SH2D1BO14796 132 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 ANGPTL7O43827 346 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 KDM4BO94953 1096 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 HAND1O96004 215 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 TMEM225BP0DP42 221 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 BCL3P20749 454 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 NPBWR2P48146 333 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 SOX2P48431 317 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 BMXP51813 675 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 UBE2E1P51965 193 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 AQP4P55087 323 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 WNT4P56705 351 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 EDDM3BP56851 147 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 PPP3R1P63098 170 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 ZNF146Q15072 292 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 SLC9A3R2Q15599 337 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 KISS1Q15726 138 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 YIF1BQ5BJH7 314 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 TMEM200BQ69YZ2 307 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 XAF1Q6GPH4 301 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 C16orf87Q6PH81 154 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 Q6YL49 198 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 AHSA2Q719I0 299 aa6.04□□□□□ -1.44
CPSF7-224ENST00000544990 SATL1Q86VE3 508 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms