RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 TMEM222Q9H0R3 208 aa11.27□□□□□ -0.61
CPSF7-223ENST00000544669 TUBA4BQ9H853 241 aa11.27□□□□□ -0.61
CPSF7-223ENST00000544669 P4HTMQ9NXG6 502 aa11.27□□□□□ -0.61
CPSF7-223ENST00000544669 LRFN1Q9P244 771 aa11.27□□□□□ -0.61
CPSF7-223ENST00000544669 LOXL2Q9Y4K0 774 aa11.27□□□□□ -0.61
CPSF7-223ENST00000544669 TMEM56-RWDD3S4R434 201 aa11.27□□□□□ -0.61
CPSF7-223ENST00000544669 IGKV1-12A0A0C4DH73 117 aa11.26□□□□□ -0.61
CPSF7-223ENST00000544669 PQLC2LA1A4F0 135 aa11.26□□□□□ -0.61
CPSF7-223ENST00000544669 C21orf140B9A014 251 aa11.26□□□□□ -0.61
CPSF7-223ENST00000544669 IGKV1D-12P01611 117 aa11.26□□□□□ -0.61
CPSF7-223ENST00000544669 AKR1C2P52895 323 aa11.26□□□□□ -0.61
CPSF7-223ENST00000544669 AKR1C1Q04828 323 aa11.26□□□□□ -0.61
CPSF7-223ENST00000544669 SPEM2Q0P670 501 aa11.26□□□□□ -0.61
CPSF7-223ENST00000544669 OR2A2Q6IF42 318 aa11.26□□□□□ -0.61
CPSF7-223ENST00000544669 ZNF695Q8IW36 515 aa11.26□□□□□ -0.61
CPSF7-223ENST00000544669 ZDHHC23Q8IYP9 409 aa11.26□□□□□ -0.61
CPSF7-223ENST00000544669 OR5L1Q8NGL2 311 aa11.26□□□□□ -0.61
CPSF7-223ENST00000544669 FSCN3Q9NQT6 498 aa11.26□□□□□ -0.61
CPSF7-223ENST00000544669 UBE2J1Q9Y385 318 aaPredicted RBP11.26□□□□□ -0.61
CPSF7-223ENST00000544669 KLF2Q9Y5W3 355 aaPredicted RBP11.26□□□□□ -0.61
CPSF7-223ENST00000544669 CDH23Q9H251 3354 aa11.26□□□□□ -0.61
CPSF7-223ENST00000544669 PHF3Q92576 2039 aaKnown RBP11.26□□□□□ -0.61
CPSF7-223ENST00000544669 CLEC18AA5D8T8 446 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 TRDCB7Z8K6 153 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 TRAPPC2LH3BP13 241 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 J3QW42 95 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 FOLR2P14207 255 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 CAMLGP49069 296 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 ARHGDIBP52566 201 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 RAB2AP61019 212 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 HGFACQ04756 655 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 BAXQ07812 192 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 PIGYQ3MUY2 71 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 RNF212Q495C1 297 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 DMRTC1Q5HYR2 192 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 TCEAL6Q6IPX3 200 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 SLC25A26Q70HW3 274 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 LYZL2Q7Z4W2 148 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 CLEC18CQ8NCF0 446 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 MAFAQ8NHW3 353 aaPredicted RBP11.25□□□□□ -0.61
CPSF7-223ENST00000544669 CT55Q8WUE5 264 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 EXTL1Q92935 676 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 ZNF775Q96BV0 537 aaPredicted RBP11.25□□□□□ -0.61
CPSF7-223ENST00000544669 PLEKHF2Q9H8W4 249 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 MPC1Q9Y5U8 109 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 CACNA1EQ15878 2313 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 TRBV6-6A0A0A6YYG2 114 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 OR5B21A6NL26 309 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 IFNA4P05014 189 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 AADACP22760 399 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 CD80P33681 288 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 SNCAP37840 140 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 NKX2-1P43699 371 aaPredicted RBP11.25□□□□□ -0.61
CPSF7-223ENST00000544669 KCNJ3P48549 501 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 RAB13P51153 203 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 RAB5BP61020 215 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 RAB1AP62820 205 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 VAMP2P63027 116 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 TSC22D1Q15714 1073 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 PHLDA2Q53GA4 152 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 DBX2Q6ZNG2 339 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 ZNF573Q86YE8 665 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 IQCF2Q8IXL9 164 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 BHLHE23Q8NDY6 225 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 OR4D5Q8NGN0 318 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 NANOS1Q8WY41 292 aaKnown RBP11.25□□□□□ -0.61
CPSF7-223ENST00000544669 SLC39A7Q92504 469 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 GNPNAT1Q96EK6 184 aaPredicted RBP11.25□□□□□ -0.61
CPSF7-223ENST00000544669 PRRG4Q9BZD6 226 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 Q9N2K0 584 aa11.25□□□□□ -0.61
CPSF7-223ENST00000544669 NAPSAO96009 420 aa11.24□□□□□ -0.61
CPSF7-223ENST00000544669 PRH1P02810 166 aa11.24□□□□□ -0.61
CPSF7-223ENST00000544669 RFPL3SP0C7P2 107 aa11.24□□□□□ -0.61
CPSF7-223ENST00000544669 JMJD7P0C870 316 aa11.24□□□□□ -0.61
CPSF7-223ENST00000544669 SLC25A6P12236 298 aa11.24□□□□□ -0.61
CPSF7-223ENST00000544669 VDAC1P21796 283 aa11.24□□□□□ -0.61
CPSF7-223ENST00000544669 NTF4P34130 210 aa11.24□□□□□ -0.61
CPSF7-223ENST00000544669 ARF1P84077 181 aaKnown RBP11.24□□□□□ -0.61
CPSF7-223ENST00000544669 Q0VFX4 171 aa11.24□□□□□ -0.61
CPSF7-223ENST00000544669 PRDX4Q13162 271 aa11.24□□□□□ -0.61
CPSF7-223ENST00000544669 OR8G1Q15617 311 aa11.24□□□□□ -0.61
CPSF7-223ENST00000544669 TSPO2Q5TGU0 170 aa11.24□□□□□ -0.61
CPSF7-223ENST00000544669 DTX1Q86Y01 620 aa11.24□□□□□ -0.61
CPSF7-223ENST00000544669 C1orf210Q8IVY1 113 aa11.24□□□□□ -0.61
CPSF7-223ENST00000544669 OR2C3Q8N628 320 aa11.24□□□□□ -0.61
CPSF7-223ENST00000544669 OR2M7Q8NG81 312 aa11.24□□□□□ -0.61
CPSF7-223ENST00000544669 LIME1Q9H400 295 aa11.24□□□□□ -0.61
CPSF7-223ENST00000544669 GP6Q9HCN6 339 aa11.24□□□□□ -0.61
CPSF7-223ENST00000544669 CACFD1Q9UGQ2 172 aa11.24□□□□□ -0.61
CPSF7-223ENST00000544669 ATP23Q9Y6H3 246 aa11.24□□□□□ -0.61
CPSF7-223ENST00000544669 ANKRD30BLA7E2S9 258 aa11.23□□□□□ -0.61
CPSF7-223ENST00000544669 GDF9O60383 454 aa11.23□□□□□ -0.61
CPSF7-223ENST00000544669 SLC34A2O95436 690 aa11.23□□□□□ -0.61
CPSF7-223ENST00000544669 WNT2P09544 360 aa11.23□□□□□ -0.61
CPSF7-223ENST00000544669 EDN3P14138 238 aa11.23□□□□□ -0.61
CPSF7-223ENST00000544669 SP6Q3SY56 376 aa11.23□□□□□ -0.61
CPSF7-223ENST00000544669 DPPA3Q6W0C5 159 aa11.23□□□□□ -0.61
CPSF7-223ENST00000544669 MCEMP1Q8IX19 187 aa11.23□□□□□ -0.61
CPSF7-223ENST00000544669 APH1AQ96BI3 265 aa11.23□□□□□ -0.61
CPSF7-223ENST00000544669 THOC3Q96J01 351 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms