RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 ACP7Q6ZNF0 438 aa8.01□□□□□ -1.13
YBX3-215ENST00000544504 PEG10Q86TG7 708 aaKnown RBP8.01□□□□□ -1.13
YBX3-215ENST00000544504 C11orf53Q8IXP5 236 aa8.01□□□□□ -1.13
YBX3-215ENST00000544504 CHST4Q8NCG5 386 aa8.01□□□□□ -1.13
YBX3-215ENST00000544504 RDH5Q92781 318 aa8.01□□□□□ -1.13
YBX3-215ENST00000544504 SOSTQ9BQB4 213 aa8.01□□□□□ -1.13
YBX3-215ENST00000544504 CCDC32Q9BV29 185 aa8.01□□□□□ -1.13
YBX3-215ENST00000544504 CACNG6Q9BXT2 260 aa8.01□□□□□ -1.13
YBX3-215ENST00000544504 IFT22Q9H7X7 185 aa8.01□□□□□ -1.13
YBX3-215ENST00000544504 MYOZ1Q9NP98 299 aaPredicted RBP8.01□□□□□ -1.13
YBX3-215ENST00000544504 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.01□□□□□ -1.13
YBX3-215ENST00000544504 RBFOX1Q9NWB1 397 aaKnown RBP8.01□□□□□ -1.13
YBX3-215ENST00000544504 DNAJB11Q9UBS4 358 aa8.01□□□□□ -1.13
YBX3-215ENST00000544504 HSF4Q9ULV5 492 aa8.01□□□□□ -1.13
YBX3-215ENST00000544504 LAMP3Q9UQV4 416 aa8.01□□□□□ -1.13
YBX3-215ENST00000544504 TRAV18A0A075B6X5 111 aa8□□□□□ -1.13
YBX3-215ENST00000544504 TRAV38-1A0A0B4J264 116 aa8□□□□□ -1.13
YBX3-215ENST00000544504 A0A1W2PPR1 153 aa8□□□□□ -1.13
YBX3-215ENST00000544504 POM121CA8CG34 1229 aa8□□□□□ -1.13
YBX3-215ENST00000544504 RAB27BO00194 218 aa8□□□□□ -1.13
YBX3-215ENST00000544504 NDUFA2O43678 99 aa8□□□□□ -1.13
YBX3-215ENST00000544504 PDCD6O75340 191 aa8□□□□□ -1.13
YBX3-215ENST00000544504 OR7C1O76099 320 aaPredicted RBP8□□□□□ -1.13
YBX3-215ENST00000544504 LHBP01229 141 aa8□□□□□ -1.13
YBX3-215ENST00000544504 HIST1H1DP16402 221 aaKnown RBP8□□□□□ -1.13
YBX3-215ENST00000544504 GABRR1P24046 479 aa8□□□□□ -1.13
YBX3-215ENST00000544504 KCNJ3P48549 501 aa8□□□□□ -1.13
YBX3-215ENST00000544504 TAS2R20P59543 309 aa8□□□□□ -1.13
YBX3-215ENST00000544504 MRPS15P82914 257 aaKnown RBP8□□□□□ -1.13
YBX3-215ENST00000544504 SSBP1Q04837 148 aaKnown RBP8□□□□□ -1.13
YBX3-215ENST00000544504 IKZF1Q13422 519 aa8□□□□□ -1.13
YBX3-215ENST00000544504 ZNF146Q15072 292 aa8□□□□□ -1.13
YBX3-215ENST00000544504 TAF9Q16594 264 aa8□□□□□ -1.13
YBX3-215ENST00000544504 MICBQ29980 383 aa8□□□□□ -1.13
YBX3-215ENST00000544504 PYDC2Q56P42 97 aa8□□□□□ -1.13
YBX3-215ENST00000544504 HACD4Q5VWC8 232 aa8□□□□□ -1.13
YBX3-215ENST00000544504 ZNF826PQ6ZT77 177 aa8□□□□□ -1.13
YBX3-215ENST00000544504 Q6ZTK2 550 aa8□□□□□ -1.13
YBX3-215ENST00000544504 MFSD4AQ8N468 514 aa8□□□□□ -1.13
YBX3-215ENST00000544504 PPP1R35Q8TAP8 253 aa8□□□□□ -1.13
YBX3-215ENST00000544504 BORCS5Q969J3 196 aa8□□□□□ -1.13
YBX3-215ENST00000544504 TIMD4Q96H15 378 aa8□□□□□ -1.13
YBX3-215ENST00000544504 CCL19Q99731 98 aa8□□□□□ -1.13
YBX3-215ENST00000544504 DNTTIP1Q9H147 329 aa8□□□□□ -1.13
YBX3-215ENST00000544504 KCNK15Q9H427 330 aa8□□□□□ -1.13
YBX3-215ENST00000544504 SCPEP1Q9HB40 452 aa8□□□□□ -1.13
YBX3-215ENST00000544504 BARX1Q9HBU1 254 aaPredicted RBP8□□□□□ -1.13
YBX3-215ENST00000544504 PALMDQ9NP74 551 aa8□□□□□ -1.13
YBX3-215ENST00000544504 TMEM106BQ9NUM4 274 aa8□□□□□ -1.13
YBX3-215ENST00000544504 PLEKHJ1Q9NW61 149 aa8□□□□□ -1.13
YBX3-215ENST00000544504 MRPS7Q9Y2R9 242 aaKnown RBP8□□□□□ -1.13
YBX3-215ENST00000544504 V9GYH0 126 aa8□□□□□ -1.13
YBX3-215ENST00000544504 A0A0G2JMP0 313 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 IGHV3-64DA0A0J9YX35 117 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 A0A0X1KG70 313 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 A0A1W2PP11 408 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 MCRIP1C9JLW8 97 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 TMEM178BH3BS89 294 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 GABARAPH6UMI1 98 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 OVOL3O00110 214 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 LGALS8O00214 317 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 GEMIN2O14893 280 aaKnown RBP7.99□□□□□ -1.13
YBX3-215ENST00000544504 DEGS1O15121 323 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 MELTFP08582 738 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 CHATP28329 748 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 PRSS3P35030 304 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 MDH2P40926 338 aaKnown RBP7.99□□□□□ -1.13
YBX3-215ENST00000544504 CBX5P45973 191 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 PTH2RP49190 550 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 EFNA4P52798 201 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 ARFRP1Q13795 201 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 PIGYQ3MUY2 71 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 CDNFQ49AH0 187 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 ZCCHC24Q8N2G6 241 aaKnown RBP7.99□□□□□ -1.13
YBX3-215ENST00000544504 Q8N402 240 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 GCSAMQ8N6F7 178 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 OR4M2Q8NGB6 313 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 FCAMRQ8WWV6 532 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 CCL17Q92583 94 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 RAB1CQ92928 201 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 ZNF488Q96MN9 340 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 RIMS4Q9H426 269 aaPredicted RBP7.99□□□□□ -1.13
YBX3-215ENST00000544504 AUNIPQ9H7T9 357 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 RCC2Q9P258 522 aaKnown RBP7.99□□□□□ -1.13
YBX3-215ENST00000544504 NLKQ9UBE8 527 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 WIPI2Q9Y4P8 454 aa7.99□□□□□ -1.13
YBX3-215ENST00000544504 RAI1Q7Z5J4 1906 aaPredicted RBP7.99□□□□□ -1.13
YBX3-215ENST00000544504 ARFGEF3Q5TH69 2177 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 PPIAL4EA0A075B759 164 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 FUOMA2VDF0 154 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 OOEPA6NGQ2 149 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 NKX6-3A6NJ46 265 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 OR2AT4A6NND4 320 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 FOXI3A8MTJ6 420 aaPredicted RBP7.98□□□□□ -1.13
YBX3-215ENST00000544504 PPIAL4DF5H284 164 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 F8VVB4 439 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 F8VWA3 439 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 SOCS1O15524 211 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 GSTZ1O43708 216 aaPredicted RBP7.98□□□□□ -1.13
YBX3-215ENST00000544504 HAND1O96004 215 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms