RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 UBAC2Q8NBM4 344 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 BHLHE23Q8NDY6 225 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 OR6X1Q8NH79 312 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 LYPD6BQ8NI32 183 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 AQP10Q96PS8 301 aa13.05□□□□□ -0.32
CHFR-223ENST00000544268 PINLYPA6NC86 204 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 SEC14L6B5MCN3 397 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 ZNHIT1O43257 154 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 HKR1P10072 659 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 RAB6AP20340 208 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 MPZP25189 248 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 NDUFA6P56556 154 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 RAB1AP62820 205 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 CLINT1Q14677 625 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 HEPN1Q6WQI6 88 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 HIST2H3AQ71DI3 136 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 OR10D4PQ8NGN7 298 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 ARHGAP5-AS1Q96IT6 56 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 ZNF581Q9P0T4 197 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 MSGN1A6NI15 193 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 ZNF726A6NNF4 738 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 BPNT1O95861 308 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 NPY4RP50391 375 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 GAMTQ14353 236 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 RSU1Q15404 277 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.04□□□□□ -0.32
CHFR-223ENST00000544268 OXGR1Q96P68 337 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 HES7Q9BYE0 225 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 DOK5Q9P104 306 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 STARD10Q9Y365 291 aa13.04□□□□□ -0.32
CHFR-223ENST00000544268 PRRC2CQ9Y520 2896 aaKnown RBP13.04□□□□□ -0.32
CHFR-223ENST00000544268 AQP7P3A6NL99 342 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 H7C1Q1 480 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 SDCBPO00560 298 aaPredicted RBP13.03□□□□□ -0.32
CHFR-223ENST00000544268 EFSO43281 561 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 CDC14BO60729 498 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 PAX1P15863 534 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 SURF2Q15527 256 aaPredicted RBP13.03□□□□□ -0.32
CHFR-223ENST00000544268 OR1C1Q15619 314 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 RSPO1Q2MKA7 263 aaPredicted RBP13.03□□□□□ -0.32
CHFR-223ENST00000544268 PRSS54Q6PEW0 395 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 UNQ6494/PRO21346Q6UXR6 183 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 SLC25A43Q8WUT9 341 aaPredicted RBP13.03□□□□□ -0.32
CHFR-223ENST00000544268 GPER1Q99527 375 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 C20orf24Q9BUV8 137 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 TAF9BQ9HBM6 251 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 C19orf12Q9NSK7 152 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 ABI3Q9P2A4 366 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 TAAR5O14804 337 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 OR8U9P0C7N5 309 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 FAHP16930 419 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 HOXC12P31275 282 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 NTF4P34130 210 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 CEACAM6P40199 344 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 LSM6P62312 80 aaKnown RBP13.03□□□□□ -0.32
CHFR-223ENST00000544268 HIST3H3Q16695 136 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 YRDCQ86U90 279 aaKnown RBP13.03□□□□□ -0.32
CHFR-223ENST00000544268 CCDC54Q8NEL0 328 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 OR8U1Q8NH10 309 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 PTX4Q96A99 478 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 YPEL4Q96NS1 127 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 SLC5A7Q9GZV3 580 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 SPACA1Q9HBV2 294 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 FLVCR1Q9Y5Y0 555 aa13.03□□□□□ -0.32
CHFR-223ENST00000544268 A0A1W2PPE2 198 aa13.02□□□□□ -0.32
CHFR-223ENST00000544268 RRP8O43159 456 aaKnown RBP13.02□□□□□ -0.32
CHFR-223ENST00000544268 PATE4P0C8F1 98 aa13.02□□□□□ -0.32
CHFR-223ENST00000544268 SRD5A2P31213 254 aa13.02□□□□□ -0.32
CHFR-223ENST00000544268 NUTF2P61970 127 aaKnown RBP13.02□□□□□ -0.32
CHFR-223ENST00000544268 FOXO1Q12778 655 aa13.02□□□□□ -0.32
CHFR-223ENST00000544268 RTP5Q14D33 572 aa13.02□□□□□ -0.32
CHFR-223ENST00000544268 ACTBL2Q562R1 376 aa13.02□□□□□ -0.32
CHFR-223ENST00000544268 COMMD1Q8N668 190 aa13.02□□□□□ -0.32
CHFR-223ENST00000544268 NAXEQ8NCW5 288 aa13.02□□□□□ -0.32
CHFR-223ENST00000544268 OR4K15Q8NH41 348 aa13.02□□□□□ -0.32
CHFR-223ENST00000544268 WASF3Q9UPY6 502 aa13.02□□□□□ -0.32
CHFR-223ENST00000544268 TNFSF11O14788 317 aa13.02□□□□□ -0.33
CHFR-223ENST00000544268 ZNF205O95201 554 aa13.02□□□□□ -0.33
CHFR-223ENST00000544268 RPS10P46783 165 aaKnown RBP13.02□□□□□ -0.33
CHFR-223ENST00000544268 B3GALT5-AS1P59052 145 aa13.02□□□□□ -0.33
CHFR-223ENST00000544268 PLXDC2Q6UX71 529 aa13.02□□□□□ -0.33
CHFR-223ENST00000544268 CLEC9AQ6UXN8 241 aa13.02□□□□□ -0.33
CHFR-223ENST00000544268 Q6ZRG5 221 aa13.02□□□□□ -0.33
CHFR-223ENST00000544268 PIGTQ969N2 578 aa13.02□□□□□ -0.33
CHFR-223ENST00000544268 ST6GALNAC5Q9BVH7 336 aa13.02□□□□□ -0.33
CHFR-223ENST00000544268 RBM24Q9BX46 236 aaKnown RBP13.02□□□□□ -0.33
CHFR-223ENST00000544268 UNKLQ9H9P5 680 aaKnown RBP13.02□□□□□ -0.33
CHFR-223ENST00000544268 DNAJB11Q9UBS4 358 aa13.02□□□□□ -0.33
CHFR-223ENST00000544268 HDGFL3Q9Y3E1 203 aa13.02□□□□□ -0.33
CHFR-223ENST00000544268 A0A0A6YYH2 397 aa13.01□□□□□ -0.33
CHFR-223ENST00000544268 A6NJ64 397 aa13.01□□□□□ -0.33
CHFR-223ENST00000544268 ENDOGQ14249 297 aaKnown RBP13.01□□□□□ -0.33
CHFR-223ENST00000544268 SLC9A3R2Q15599 337 aa13.01□□□□□ -0.33
CHFR-223ENST00000544268 UBE2V2Q15819 145 aa13.01□□□□□ -0.33
CHFR-223ENST00000544268 OR14K1Q8NGZ2 314 aa13.01□□□□□ -0.33
CHFR-223ENST00000544268 OR14L1PQ8NHC6 308 aa13.01□□□□□ -0.33
CHFR-223ENST00000544268 BCO1Q9HAY6 547 aa13.01□□□□□ -0.33
CHFR-223ENST00000544268 A6NJY4 79 aa13.01□□□□□ -0.33
CHFR-223ENST00000544268 RPL36A-HNRNPH2H7BZ11 118 aa13.01□□□□□ -0.33
CHFR-223ENST00000544268 ADAP1O75689 374 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms