RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 ZNF766Q5HY98 468 aa11.96□□□□□ -0.49
MSH2-206ENST00000543555 FAM219AQ8IW50 185 aa11.96□□□□□ -0.49
MSH2-206ENST00000543555 SAXO1Q8IYX7 474 aa11.96□□□□□ -0.49
MSH2-206ENST00000543555 SLAMF9Q96A28 289 aa11.96□□□□□ -0.49
MSH2-206ENST00000543555 SHARPINQ9H0F6 387 aa11.96□□□□□ -0.49
MSH2-206ENST00000543555 C12orf49Q9H741 205 aa11.96□□□□□ -0.49
MSH2-206ENST00000543555 CYTL1Q9NRR1 136 aa11.96□□□□□ -0.49
MSH2-206ENST00000543555 SPRR3Q9UBC9 169 aa11.96□□□□□ -0.49
MSH2-206ENST00000543555 FREM1Q5H8C1 2179 aa11.96□□□□□ -0.49
MSH2-206ENST00000543555 FAM90A10PA6NDY2 464 aa11.96□□□□□ -0.5
MSH2-206ENST00000543555 FAM90A18PA6NE21 464 aa11.96□□□□□ -0.5
MSH2-206ENST00000543555 FAM90A16PA6NEW6 464 aa11.96□□□□□ -0.5
MSH2-206ENST00000543555 FAM90A20PA6NIJ5 464 aa11.96□□□□□ -0.5
MSH2-206ENST00000543555 FAM90A8PA6NJQ4 464 aa11.96□□□□□ -0.5
MSH2-206ENST00000543555 FAM90A7PA6NKC0 464 aa11.96□□□□□ -0.5
MSH2-206ENST00000543555 FAM90A22PA8MWA6 464 aa11.96□□□□□ -0.5
MSH2-206ENST00000543555 FAM90A12PA8MX19 464 aa11.96□□□□□ -0.5
MSH2-206ENST00000543555 FAM90A5PA8MXJ8 464 aa11.96□□□□□ -0.5
MSH2-206ENST00000543555 FAM90A23PA8MXZ1 464 aa11.96□□□□□ -0.5
MSH2-206ENST00000543555 FAM90A15PP0C7V4 464 aa11.96□□□□□ -0.5
MSH2-206ENST00000543555 FAM90A13PP0C7W8 464 aa11.96□□□□□ -0.5
MSH2-206ENST00000543555 FAM90A14PP0C7W9 464 aa11.96□□□□□ -0.5
MSH2-206ENST00000543555 FAM90A24PP0C7X0 464 aa11.96□□□□□ -0.5
MSH2-206ENST00000543555 FCGR2CP31995 323 aa11.96□□□□□ -0.5
MSH2-206ENST00000543555 FXYD4P59646 89 aa11.96□□□□□ -0.5
MSH2-206ENST00000543555 NAAAQ02083 359 aa11.96□□□□□ -0.5
MSH2-206ENST00000543555 IAH1Q2TAA2 248 aaPredicted RBP11.96□□□□□ -0.5
MSH2-206ENST00000543555 RNFT1Q5M7Z0 435 aa11.96□□□□□ -0.5
MSH2-206ENST00000543555 ELP2Q6IA86 826 aa11.96□□□□□ -0.5
MSH2-206ENST00000543555 GALNT11Q8NCW6 608 aa11.96□□□□□ -0.5
MSH2-206ENST00000543555 ZNF629Q9UEG4 869 aaPredicted RBP11.96□□□□□ -0.5
MSH2-206ENST00000543555 PTPRBP23467 1997 aa11.96□□□□□ -0.5
MSH2-206ENST00000543555 TRGV5A0A0B4J1U4 118 aa11.95□□□□□ -0.5
MSH2-206ENST00000543555 IL18BPO95998 194 aa11.95□□□□□ -0.5
MSH2-206ENST00000543555 S100A10P60903 97 aa11.95□□□□□ -0.5
MSH2-206ENST00000543555 SLC30A7Q8NEW0 376 aa11.95□□□□□ -0.5
MSH2-206ENST00000543555 OPA3Q9H6K4 179 aa11.95□□□□□ -0.5
MSH2-206ENST00000543555 NAA60Q9H7X0 242 aa11.95□□□□□ -0.5
MSH2-206ENST00000543555 DNAJB11Q9UBS4 358 aa11.95□□□□□ -0.5
MSH2-206ENST00000543555 FGF12P61328 243 aa11.95□□□□□ -0.5
MSH2-206ENST00000543555 ABCA11PQ4W5N1 156 aa11.95□□□□□ -0.5
MSH2-206ENST00000543555 HIKESHIQ53FT3 197 aa11.95□□□□□ -0.5
MSH2-206ENST00000543555 TMEM200AQ86VY9 491 aa11.95□□□□□ -0.5
MSH2-206ENST00000543555 C17orf50Q8WW18 174 aa11.95□□□□□ -0.5
MSH2-206ENST00000543555 KCNIP3Q9Y2W7 256 aa11.95□□□□□ -0.5
MSH2-206ENST00000543555 ZNF732B4DXR9 585 aa11.95□□□□□ -0.5
MSH2-206ENST00000543555 BAP18Q8IXM2 172 aa11.95□□□□□ -0.5
MSH2-206ENST00000543555 TMEM178AQ8NBL3 297 aa11.95□□□□□ -0.5
MSH2-206ENST00000543555 OR1K1Q8NGR3 316 aa11.95□□□□□ -0.5
MSH2-206ENST00000543555 RTN4IP1Q8WWV3 396 aaPredicted RBP11.95□□□□□ -0.5
MSH2-206ENST00000543555 MOB3AQ96BX8 217 aa11.95□□□□□ -0.5
MSH2-206ENST00000543555 GALNT14Q96FL9 552 aa11.95□□□□□ -0.5
MSH2-206ENST00000543555 ZNF552Q9H707 407 aaPredicted RBP11.95□□□□□ -0.5
MSH2-206ENST00000543555 SLC22A20A6NK97 555 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 CD300LBA8K4G0 201 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 IFNA21P01568 189 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 WT1P19544 449 aaPredicted RBP11.94□□□□□ -0.5
MSH2-206ENST00000543555 APLNRP35414 380 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 GLP1RP43220 463 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 SOX8P57073 446 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 FBXW9Q5XUX1 488 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 GGNBP1Q5YKI7 109 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 OR5A2Q8NGI9 324 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 EXTL1Q92935 676 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 MRPL24Q96A35 216 aaKnown RBP11.94□□□□□ -0.5
MSH2-206ENST00000543555 CNTNAP3BQ96NU0 1288 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 SCNM1Q9BWG6 230 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 CNTNAP3Q9BZ76 1288 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 ZDHHC11Q9H8X9 412 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 ZNF407Q9C0G0 2248 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 SMG1Q96Q15 3661 aaKnown RBP11.94□□□□□ -0.5
MSH2-206ENST00000543555 WNT5AP41221 380 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 UCP3P55916 312 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 CLN3Q13286 438 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 TMPRSS7Q7RTY8 843 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 DPPA2Q7Z7J5 298 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 BCL2L2Q92843 193 aaPredicted RBP11.94□□□□□ -0.5
MSH2-206ENST00000543555 HS3ST6Q96QI5 342 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 ASCL3Q9NQ33 180 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 SLC2A9Q9NRM0 540 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 MTCH1Q9NZJ7 389 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 TUBD1Q9UJT1 453 aa11.94□□□□□ -0.5
MSH2-206ENST00000543555 NKX2-8O15522 239 aa11.93□□□□□ -0.5
MSH2-206ENST00000543555 OR5AC1P0C628 307 aa11.93□□□□□ -0.5
MSH2-206ENST00000543555 CD82P27701 267 aa11.93□□□□□ -0.5
MSH2-206ENST00000543555 TMEM187Q14656 261 aa11.93□□□□□ -0.5
MSH2-206ENST00000543555 SP6Q3SY56 376 aa11.93□□□□□ -0.5
MSH2-206ENST00000543555 PHLDA2Q53GA4 152 aa11.93□□□□□ -0.5
MSH2-206ENST00000543555 ZNF585AQ6P3V2 769 aa11.93□□□□□ -0.5
MSH2-206ENST00000543555 MKXQ8IYA7 352 aa11.93□□□□□ -0.5
MSH2-206ENST00000543555 HIST1H2AAQ96QV6 131 aa11.93□□□□□ -0.5
MSH2-206ENST00000543555 SLC5A7Q9GZV3 580 aa11.93□□□□□ -0.5
MSH2-206ENST00000543555 TAS2R3Q9NYW6 316 aa11.93□□□□□ -0.5
MSH2-206ENST00000543555 COQ3Q9NZJ6 369 aa11.93□□□□□ -0.5
MSH2-206ENST00000543555 PRSS44E7EML9 344 aa11.93□□□□□ -0.5
MSH2-206ENST00000543555 FGF16O43320 207 aa11.93□□□□□ -0.5
MSH2-206ENST00000543555 FOXRED2Q8IWF2 684 aa11.93□□□□□ -0.5
MSH2-206ENST00000543555 SLC38A6Q8IZM9 456 aa11.93□□□□□ -0.5
MSH2-206ENST00000543555 STPG2Q8N412 459 aa11.93□□□□□ -0.5
MSH2-206ENST00000543555 GP6Q9HCN6 339 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms