RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 RPP14O95059 124 aaKnown RBP4.31□□□□□ -1.72
CLIP1-217ENST00000543205 IGHV3-13P01766 116 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 ADRA2AP08913 450 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 MYL12AP19105 171 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 CFL1P23528 166 aaKnown RBP4.31□□□□□ -1.72
CLIP1-217ENST00000543205 DCKP27707 260 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 RPS19P39019 145 aaKnown RBP4.31□□□□□ -1.72
CLIP1-217ENST00000543205 PPOXP50336 477 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 ATP5J2P56134 94 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 ACTA2P62736 377 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 ACTG2P63267 376 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 ZNF85Q03923 595 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 SSX2Q16385 188 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 SNAI3Q3KNW1 292 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 TP53I3Q53FA7 332 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 ESCO2Q56NI9 601 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 GLYATL3Q5SZD4 288 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 C11orf71Q6IPW1 123 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 FBXW12Q6X9E4 464 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 PGAP1Q75T13 922 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 LHFPL3Q86UP9 236 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 KLBQ86Z14 1044 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 STX19Q8N4C7 294 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 OR52I1Q8NGK6 324 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 SPRYD4Q8WW59 207 aaPredicted RBP4.31□□□□□ -1.72
CLIP1-217ENST00000543205 GGHQ92820 318 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 RPL3LQ92901 407 aaKnown RBP4.31□□□□□ -1.72
CLIP1-217ENST00000543205 MOB3AQ96BX8 217 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 TMEM80Q96HE8 168 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 REEP6Q96HR9 211 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 GFI1Q99684 422 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 ALG8Q9BVK2 526 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 PBOV1Q9GZY1 135 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 RAB1BQ9H0U4 201 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 DPAGT1Q9H3H5 408 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 CYSLTR2Q9NS75 346 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 ZNF275Q9NSD4 429 aaPredicted RBP4.31□□□□□ -1.72
CLIP1-217ENST00000543205 ZFP57Q9NU63 452 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 PLCXD1Q9NUJ7 323 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 FAM206AQ9NX38 181 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 MYEF2Q9P2K5 600 aaKnown RBP4.31□□□□□ -1.72
CLIP1-217ENST00000543205 MRM2Q9UI43 246 aaKnown RBP4.31□□□□□ -1.72
CLIP1-217ENST00000543205 PSORS1C1Q9UIG5 152 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 PURGQ9UJV8 347 aaKnown RBP4.31□□□□□ -1.72
CLIP1-217ENST00000543205 MYRFQ9Y2G1 1151 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 CBY1Q9Y3M2 126 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 R4GMQ9 66 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 ABCA4P78363 2273 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 CADP27708 2225 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 HEATR1Q9H583 2144 aaKnown RBP4.31□□□□□ -1.72
CLIP1-217ENST00000543205 PDZD2O15018 2839 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 FAM240BA0A1B0GVZ2 78 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 LOC110117498-PIK3R3F6TDL0 507 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 H7C417 338 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 J3QLW9 94 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 OVOL3O00110 214 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 TRIAP1O43715 76 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 XPNPEP2O43895 674 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 SSX4O60224 188 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 MBP02144 154 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 IL6RP08887 468 aaPredicted RBP4.31□□□□□ -1.72
CLIP1-217ENST00000543205 PIPP12273 146 aaPredicted RBP4.31□□□□□ -1.72
CLIP1-217ENST00000543205 ZNF44P15621 663 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 ZNF19P17023 458 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 KITLGP21583 273 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 CDX1P47902 265 aaPredicted RBP4.31□□□□□ -1.72
CLIP1-217ENST00000543205 POU3F4P49335 361 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 CEBPDP49716 269 aaPredicted RBP4.31□□□□□ -1.72
CLIP1-217ENST00000543205 OR12D2P58182 307 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 ZNF92Q03936 586 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 MFGE8Q08431 387 aaPredicted RBP4.31□□□□□ -1.72
CLIP1-217ENST00000543205 FGL1Q08830 312 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 ST3GAL4Q11206 333 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 PSG7Q13046 419 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 P2RY14Q15391 338 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 BCL2L15Q5TBC7 163 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 OR2T2Q6IF00 324 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 FAM166AQ6J272 317 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 TMPRSS11AQ6ZMR5 421 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 AHSA2Q719I0 299 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 COMMD2Q86X83 199 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 OR5AS1Q8N127 324 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 OR8B12Q8NGG6 310 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 OR2AE1Q8NHA4 323 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 CHPT1Q8WUD6 406 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 MITD1Q8WV92 249 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 IGFBPL1Q8WX77 278 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 MYDGFQ969H8 173 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 TECTBQ96PL2 329 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 MOB1AQ9H8S9 216 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 Q9N2K0 584 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 FGF20Q9NP95 211 aaPredicted RBP4.31□□□□□ -1.72
CLIP1-217ENST00000543205 MTCH1Q9NZJ7 389 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 ZNF391Q9UJN7 358 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 DIMT1Q9UNQ2 313 aaKnown RBP4.31□□□□□ -1.72
CLIP1-217ENST00000543205 EXOSC1Q9Y3B2 195 aaKnown RBP4.31□□□□□ -1.72
CLIP1-217ENST00000543205 TPRKBQ9Y3C4 175 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 APCP25054 2843 aa4.31□□□□□ -1.72
CLIP1-217ENST00000543205 C5orf63A6NC05 138 aa4.3□□□□□ -1.72
CLIP1-217ENST00000543205 SLC1A7O00341 560 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms