RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 TBC1D28Q2M2D7 210 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 H2BFWTQ7Z2G1 175 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 LINC00518Q8N0U6 118 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 LIN7CQ9NUP9 197 aaKnown RBP7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 BPTFQ12830 3046 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 CLEC18AA5D8T8 446 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 RNF222A6NCQ9 220 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 SIRPB1O00241 398 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 CDS2O95674 445 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 FOSL2P15408 326 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 RAB5AP20339 215 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 SRD5A2P31213 254 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 PTGER4P35408 488 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 SULT1A1P50225 295 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 OR2B11Q5JQS5 317 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 GLRX5Q86SX6 157 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 ZNF610Q8N9Z0 462 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 CLEC18CQ8NCF0 446 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 OR10D3Q8NH80 312 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 RAB40CQ96S21 281 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 RAB9BQ9NP90 201 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 COL4A4P53420 1690 aaPredicted RBP7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 CEP350Q5VT06 3117 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 NPIPB13A6NJU9 1138 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 NPIPB4C9JG80 1138 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 CLDN34H7C241 214 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 MASP2O00187 686 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 PDGFBP01127 241 aaPredicted RBP7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 GNG3P63215 75 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 HTD2P86397 168 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 MZT1Q08AG7 82 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 LY6G6FQ5SQ64 297 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 SLC25A47Q6Q0C1 308 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 ZNF808Q8N4W9 903 aaPredicted RBP7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 NUDT16L1Q9BRJ7 211 aaKnown RBP7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 SF3B5Q9BWJ5 86 aaKnown RBP7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 TGIF2Q9GZN2 237 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 UFSP2Q9NUQ7 469 aa7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 COLQQ9Y215 455 aaPredicted RBP7.19□□□□□ -1.26
PRKAB1-207ENST00000542698 TIMM8AO60220 97 aaPredicted RBP7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 SCGB1D1O95968 90 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 PRF1P14222 555 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 IGFBP3P17936 291 aaPredicted RBP7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 KITLGP21583 273 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 NHLH2Q02577 135 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 CLEC12BQ2HXU8 276 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 PIGYQ3MUY2 71 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 FER1L6-AS2Q96M78 137 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 SAMD10Q9BYL1 202 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 STARD10Q9Y365 291 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 TERTO14746 1132 aaKnown RBP7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 HMGB3O15347 200 aaKnown RBP7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 CHST1O43916 411 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 IL2RAP01589 272 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 IGHMP01871 453 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 CCL3P10147 92 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 EPHA8P29322 1005 aaPredicted RBP7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 PRDX4Q13162 271 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 SLC10A1Q14973 349 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 FAM27BQ5VT28 67 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 TMEM211Q6ICI0 200 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 TBC1D26Q86UD7 250 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 NECAP1Q8NC96 275 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 OR10D4PQ8NGN7 298 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 OR4F5Q8NH21 305 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 OR4A16Q8NH70 328 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 ADAMTS17Q8TE56 1095 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 CLDN23Q96B33 292 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 PINX1Q96BK5 328 aaKnown RBP7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 OR4F4Q96R69 305 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 HIPK2Q9H2X6 1198 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 P4HTMQ9NXG6 502 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 LIPGQ9Y5X9 500 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 IGKV1D-43A0A0B4J1Z2 117 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 SPINT2O43291 252 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 TRAF3IP2O43734 574 aaPredicted RBP7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 DEDDO75618 318 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 SCAF4O95104 1147 aaKnown RBP7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 SMIM6P0DI80 62 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 ACKR3P25106 362 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 LPAR6P43657 344 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 NOVA1P51513 510 aaKnown RBP7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 ENDOGQ14249 297 aaKnown RBP7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 ACER2Q5QJU3 275 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 NCR3LG1Q68D85 454 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 UBALD1Q8TB05 177 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 SLC39A7Q92504 469 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 ADGRG7Q96K78 797 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 ZNF251Q9BRH9 671 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 RTN4RQ9BZR6 473 aa7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 PATZ1Q9HBE1 687 aaKnown RBP7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 RCC2Q9P258 522 aaKnown RBP7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 SNRNP200O75643 2136 aaKnown RBP7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 PHF3Q92576 2039 aaKnown RBP7.18□□□□□ -1.26
PRKAB1-207ENST00000542698 IGKV3D-11A0A0A0MRZ8 115 aa7.17□□□□□ -1.26
PRKAB1-207ENST00000542698 LOC101059948A0A1B0GTJ6 334 aa7.17□□□□□ -1.26
PRKAB1-207ENST00000542698 MDFIC2A0A1B0GVS7 189 aa7.17□□□□□ -1.26
PRKAB1-207ENST00000542698 A0A1W2PPE2 198 aa7.17□□□□□ -1.26
PRKAB1-207ENST00000542698 NKX2-6A6NCS4 301 aa7.17□□□□□ -1.26
PRKAB1-207ENST00000542698 MSGN1A6NI15 193 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms