RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 TEX15Q9BXT5 2789 aa19.28■□□□□ 0.68
HOMER3-205ENST00000542541 OR2H2O95918 312 aa19.28■□□□□ 0.68
HOMER3-205ENST00000542541 RPS2P15880 293 aaKnown RBP19.28■□□□□ 0.68
HOMER3-205ENST00000542541 USF1P22415 310 aaPredicted RBP19.28■□□□□ 0.68
HOMER3-205ENST00000542541 GABRR1P24046 479 aa19.28■□□□□ 0.68
HOMER3-205ENST00000542541 LMO1P25800 156 aa19.28■□□□□ 0.68
HOMER3-205ENST00000542541 OR56B1Q8NGI3 324 aa19.28■□□□□ 0.68
HOMER3-205ENST00000542541 SLIRPQ9GZT3 109 aaKnown RBP19.28■□□□□ 0.68
HOMER3-205ENST00000542541 PATZ1Q9HBE1 687 aaKnown RBP19.28■□□□□ 0.68
HOMER3-205ENST00000542541 SIGLEC5O15389 551 aa19.27■□□□□ 0.68
HOMER3-205ENST00000542541 SCGNO76038 276 aa19.27■□□□□ 0.68
HOMER3-205ENST00000542541 AMY2BP19961 511 aa19.27■□□□□ 0.68
HOMER3-205ENST00000542541 PITPNBP48739 271 aa19.27■□□□□ 0.68
HOMER3-205ENST00000542541 CEBPDP49716 269 aaPredicted RBP19.27■□□□□ 0.68
HOMER3-205ENST00000542541 EFNB2P52799 333 aa19.27■□□□□ 0.68
HOMER3-205ENST00000542541 COL10A1Q03692 680 aa19.27■□□□□ 0.68
HOMER3-205ENST00000542541 Q6P435 159 aa19.27■□□□□ 0.68
HOMER3-205ENST00000542541 LYPD2Q6UXB3 125 aa19.27■□□□□ 0.68
HOMER3-205ENST00000542541 FAM89BQ8N5H3 189 aa19.27■□□□□ 0.68
HOMER3-205ENST00000542541 SAMD12Q8N8I0 201 aa19.27■□□□□ 0.68
HOMER3-205ENST00000542541 OR8B3Q8NGG8 313 aa19.27■□□□□ 0.68
HOMER3-205ENST00000542541 PPP1R35Q8TAP8 253 aa19.27■□□□□ 0.68
HOMER3-205ENST00000542541 PHF21AQ96BD5 680 aa19.27■□□□□ 0.68
HOMER3-205ENST00000542541 RAB39BQ96DA2 213 aa19.27■□□□□ 0.68
HOMER3-205ENST00000542541 NEIL1Q96FI4 390 aaPredicted RBP19.27■□□□□ 0.68
HOMER3-205ENST00000542541 GAFA1Q96PS6 74 aa19.27■□□□□ 0.68
HOMER3-205ENST00000542541 OR8B2Q96RD0 313 aa19.27■□□□□ 0.68
HOMER3-205ENST00000542541 ATG5Q9H1Y0 275 aa19.27■□□□□ 0.68
HOMER3-205ENST00000542541 RHBDL2Q9NX52 303 aa19.27■□□□□ 0.68
HOMER3-205ENST00000542541 A0A075B6Q4 140 aa19.26■□□□□ 0.67
HOMER3-205ENST00000542541 WNT2P09544 360 aa19.26■□□□□ 0.67
HOMER3-205ENST00000542541 UBE2NLQ5JXB2 153 aa19.26■□□□□ 0.67
HOMER3-205ENST00000542541 CLDND2Q8NHS1 167 aa19.26■□□□□ 0.67
HOMER3-205ENST00000542541 MCFD2Q8NI22 146 aa19.26■□□□□ 0.67
HOMER3-205ENST00000542541 NEDD4LQ96PU5 975 aa19.26■□□□□ 0.67
HOMER3-205ENST00000542541 MAB21L2Q9Y586 359 aa19.26■□□□□ 0.67
HOMER3-205ENST00000542541 CCDC168Q8NDH2 2452 aa19.26■□□□□ 0.67
HOMER3-205ENST00000542541 SIRPB1O00241 398 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 NDUFB3O43676 98 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 FUT3P21217 361 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 PLA2G7Q13093 441 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 PDCD1Q15116 288 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 LRRC10Q5BKY1 277 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 ATAD3CQ5T2N8 411 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 RAB12Q6IQ22 244 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 ASCC1Q8N9N2 400 aaKnown RBP19.25■□□□□ 0.67
HOMER3-205ENST00000542541 WFDC11Q8NEX6 87 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 RAB40AQ8WXH6 277 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 SNX22Q96L94 193 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 NICN1Q9BSH3 213 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 REG4Q9BYZ8 158 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 FAM234AQ9H0X4 552 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 ABCG5Q9H222 651 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 A3GALT2U3KPV4 340 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 IGHV4-61A0A0C4DH41 118 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 IGHV2-5P01817 119 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 TFF1P04155 84 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 VEGFCP49767 419 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 FAM216BQ8N7L0 139 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 ZNRF1Q8ND25 227 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 OR5D13Q8NGL4 314 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 S100A16Q96FQ6 103 aaKnown RBP19.25■□□□□ 0.67
HOMER3-205ENST00000542541 MMP27Q9H306 513 aa19.25■□□□□ 0.67
HOMER3-205ENST00000542541 SLC33A1O00400 549 aaPredicted RBP19.24■□□□□ 0.67
HOMER3-205ENST00000542541 RGS5O15539 181 aa19.24■□□□□ 0.67
HOMER3-205ENST00000542541 APOA1P02647 267 aa19.24■□□□□ 0.67
HOMER3-205ENST00000542541 GLAP06280 429 aa19.24■□□□□ 0.67
HOMER3-205ENST00000542541 BLVRBP30043 206 aaPredicted RBP19.24■□□□□ 0.67
HOMER3-205ENST00000542541 NPY4RP50391 375 aa19.24■□□□□ 0.67
HOMER3-205ENST00000542541 LMO4P61968 165 aa19.24■□□□□ 0.67
HOMER3-205ENST00000542541 TMEM185AQ8NFB2 350 aa19.24■□□□□ 0.67
HOMER3-205ENST00000542541 SLC25A38Q96DW6 304 aa19.24■□□□□ 0.67
HOMER3-205ENST00000542541 C6orf62Q9GZU0 229 aaPredicted RBP19.24■□□□□ 0.67
HOMER3-205ENST00000542541 NXF2Q9GZY0 626 aaKnown RBP19.24■□□□□ 0.67
HOMER3-205ENST00000542541 DIABLOQ9NR28 239 aa19.24■□□□□ 0.67
HOMER3-205ENST00000542541 VPS13CQ709C8 3753 aa19.24■□□□□ 0.67
HOMER3-205ENST00000542541 F5H0A9 414 aaPredicted RBP19.23■□□□□ 0.67
HOMER3-205ENST00000542541 K7N7A8 449 aa19.23■□□□□ 0.67
HOMER3-205ENST00000542541 PDCD6O75340 191 aa19.23■□□□□ 0.67
HOMER3-205ENST00000542541 ZNF737O75373 536 aa19.23■□□□□ 0.67
HOMER3-205ENST00000542541 LOXL1Q08397 574 aaPredicted RBP19.23■□□□□ 0.67
HOMER3-205ENST00000542541 RBM39Q14498 530 aaKnown RBP19.23■□□□□ 0.67
HOMER3-205ENST00000542541 PAN3Q58A45 887 aaKnown RBP19.23■□□□□ 0.67
HOMER3-205ENST00000542541 RCC2Q9P258 522 aaKnown RBP19.23■□□□□ 0.67
HOMER3-205ENST00000542541 CTSZQ9UBR2 303 aa19.23■□□□□ 0.67
HOMER3-205ENST00000542541 SLC25A10Q9UBX3 287 aaPredicted RBP19.23■□□□□ 0.67
HOMER3-205ENST00000542541 CLN8Q9UBY8 286 aa19.23■□□□□ 0.67
HOMER3-205ENST00000542541 METRNQ9UJH8 293 aa19.23■□□□□ 0.67
HOMER3-205ENST00000542541 ADAM30Q9UKF2 790 aa19.23■□□□□ 0.67
HOMER3-205ENST00000542541 PEX16Q9Y5Y5 336 aa19.23■□□□□ 0.67
HOMER3-205ENST00000542541 PRRC2AP48634 2157 aaKnown RBP19.23■□□□□ 0.67
HOMER3-205ENST00000542541 A0A0A6YYD4 124 aa19.22■□□□□ 0.67
HOMER3-205ENST00000542541 A0A0A6YYH2 397 aa19.22■□□□□ 0.67
HOMER3-205ENST00000542541 TRAV24A0A0B4J272 114 aa19.22■□□□□ 0.67
HOMER3-205ENST00000542541 A6NJ64 397 aa19.22■□□□□ 0.67
HOMER3-205ENST00000542541 MCRIP1C9JLW8 97 aa19.22■□□□□ 0.67
HOMER3-205ENST00000542541 RNF223E7ERA6 249 aa19.22■□□□□ 0.67
HOMER3-205ENST00000542541 DVL1O14640 695 aa19.22■□□□□ 0.67
HOMER3-205ENST00000542541 GPR37O15354 613 aa19.22■□□□□ 0.67
HOMER3-205ENST00000542541 TK1P04183 234 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms