RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 SPHARQ15513 63 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 SLC9A3R2Q15599 337 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 FAM27D1Q5T7N8 215 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 GPR157Q5UAW9 335 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 ELP2Q6IA86 826 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 METAP1DQ6UB28 335 aaPredicted RBP7.96□□□□□ -1.14
YBX3-212ENST00000542002 Q8IYB0 196 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 FAM185AQ8N0U4 392 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 OR8H2Q8N162 312 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 KIR3DL3Q8N743 410 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 ASCC1Q8N9N2 400 aaKnown RBP7.96□□□□□ -1.14
YBX3-212ENST00000542002 Q8NFD4 153 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 OR10K1Q8NGX5 313 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 SPATA3Q8NHX4 192 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 C17orf50Q8WW18 174 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 SNX22Q96L94 193 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 DERL3Q96Q80 235 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 MND1Q9BWT6 205 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 UNKLQ9H9P5 680 aaKnown RBP7.96□□□□□ -1.14
YBX3-212ENST00000542002 NEK6Q9HC98 313 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 TMEM138Q9NPI0 162 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 RAB26Q9ULW5 256 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 RRP15Q9Y3B9 282 aaKnown RBP7.96□□□□□ -1.14
YBX3-212ENST00000542002 TPRKBQ9Y3C4 175 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 DNAJC9-AS1A6NH13 148 aa7.95□□□□□ -1.14
YBX3-212ENST00000542002 LCE2BO14633 110 aa7.95□□□□□ -1.14
YBX3-212ENST00000542002 HOXA3O43365 443 aaPredicted RBP7.95□□□□□ -1.14
YBX3-212ENST00000542002 RGS10O43665 173 aa7.95□□□□□ -1.14
YBX3-212ENST00000542002 CYB5AP00167 134 aa7.95□□□□□ -1.14
YBX3-212ENST00000542002 CD2P06729 351 aa7.95□□□□□ -1.14
YBX3-212ENST00000542002 GABRR1P24046 479 aa7.95□□□□□ -1.14
YBX3-212ENST00000542002 PAX6P26367 422 aa7.95□□□□□ -1.14
YBX3-212ENST00000542002 BDKRB2P30411 391 aa7.95□□□□□ -1.14
YBX3-212ENST00000542002 ZNF93P35789 620 aaPredicted RBP7.95□□□□□ -1.14
YBX3-212ENST00000542002 HSPA13P48723 471 aa7.95□□□□□ -1.14
YBX3-212ENST00000542002 TAS2R43P59537 309 aa7.95□□□□□ -1.14
YBX3-212ENST00000542002 BPIFB3P59826 476 aa7.95□□□□□ -1.14
YBX3-212ENST00000542002 BDH1Q02338 343 aa7.95□□□□□ -1.14
YBX3-212ENST00000542002 MED22Q15528 200 aa7.95□□□□□ -1.14
YBX3-212ENST00000542002 ACSM3Q53FZ2 586 aa7.95□□□□□ -1.14
YBX3-212ENST00000542002 SPIN3Q5JUX0 258 aa7.95□□□□□ -1.14
YBX3-212ENST00000542002 DDI2Q5TDH0 399 aa7.95□□□□□ -1.14
YBX3-212ENST00000542002 Q6YL49 198 aa7.95□□□□□ -1.14
YBX3-212ENST00000542002 PXT1Q8NFP0 134 aa7.95□□□□□ -1.14
YBX3-212ENST00000542002 FAM216AQ8WUB2 273 aa7.95□□□□□ -1.14
YBX3-212ENST00000542002 TNFAIP8L1Q8WVP5 186 aa7.95□□□□□ -1.14
YBX3-212ENST00000542002 CYYR1Q96J86 154 aa7.95□□□□□ -1.14
YBX3-212ENST00000542002 NR1H4Q96RI1 486 aaPredicted RBP7.95□□□□□ -1.14
YBX3-212ENST00000542002 ZNF184Q99676 751 aaPredicted RBP7.95□□□□□ -1.14
YBX3-212ENST00000542002 METTL8Q9H825 291 aaKnown RBP7.95□□□□□ -1.14
YBX3-212ENST00000542002 NOX4Q9NPH5 578 aa7.95□□□□□ -1.14
YBX3-212ENST00000542002 ING4Q9UNL4 249 aa7.95□□□□□ -1.14
YBX3-212ENST00000542002 DOCK11Q5JSL3 2073 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 TRAV24A0A0B4J272 114 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 A0A1W2PP11 408 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 C17orf98A8MV24 154 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 SLC33A1O00400 549 aaPredicted RBP7.94□□□□□ -1.14
YBX3-212ENST00000542002 SH2D1BO14796 132 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 DEGS1O15121 323 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 NPFFO15130 113 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 MAGEB3O15480 346 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 DENRO43583 198 aaKnown RBP7.94□□□□□ -1.14
YBX3-212ENST00000542002 SC5DO75845 299 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 MMP23AO75900 390 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 MAS1P04201 325 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 FSTP19883 344 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 GLIPR1P48060 266 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 UBE2E1P51965 193 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 EDDM3BP56851 147 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 AESQ08117 197 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 TPBGQ13641 420 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 EDDM3AQ14507 147 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 GRK1Q15835 563 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 PIGYQ3MUY2 71 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 RBM48Q5RL73 367 aaKnown RBP7.94□□□□□ -1.14
YBX3-212ENST00000542002 UTF1Q5T230 341 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 LIPKQ5VXJ0 399 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 TMEM91Q6ZNR0 172 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 PRSS48Q7RTY5 328 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 LRRTM1Q86UE6 522 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 CMTM4Q8IZR5 234 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 OR51T1Q8NGJ9 327 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 OR5D13Q8NGL4 314 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 ZFAND2BQ8WV99 257 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 TMEM203Q969S6 136 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 GPER1Q99527 375 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 TMED9Q9BVK6 235 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 RHOFQ9HBH0 211 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 EXOSC4Q9NPD3 245 aaKnown RBP7.94□□□□□ -1.14
YBX3-212ENST00000542002 TNFRSF19Q9NS68 423 aa7.94□□□□□ -1.14
YBX3-212ENST00000542002 SF3B6Q9Y3B4 125 aaKnown RBP7.94□□□□□ -1.14
YBX3-212ENST00000542002 CLDN34H7C241 214 aa7.93□□□□□ -1.14
YBX3-212ENST00000542002 TRIM77I1YAP6 450 aa7.93□□□□□ -1.14
YBX3-212ENST00000542002 HTR3BO95264 441 aa7.93□□□□□ -1.14
YBX3-212ENST00000542002 RNASE1P07998 156 aaKnown RBP7.93□□□□□ -1.14
YBX3-212ENST00000542002 MELTFP08582 738 aa7.93□□□□□ -1.14
YBX3-212ENST00000542002 HSMCR30P0CW71 290 aa7.93□□□□□ -1.14
YBX3-212ENST00000542002 ZNF728P0DKX0 622 aa7.93□□□□□ -1.14
YBX3-212ENST00000542002 MTNR1BP49286 362 aa7.93□□□□□ -1.14
YBX3-212ENST00000542002 RPS25P62851 125 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms