RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 SRD5A2P31213 254 aa14.07□□□□□ -0.16
VARS2-212ENST00000542001 FGF8P55075 233 aaPredicted RBP14.07□□□□□ -0.16
VARS2-212ENST00000542001 ERVK-16P61578 105 aa14.07□□□□□ -0.16
VARS2-212ENST00000542001 PSG4Q00888 419 aa14.07□□□□□ -0.16
VARS2-212ENST00000542001 DEFB109BQ30KR1 87 aa14.07□□□□□ -0.16
VARS2-212ENST00000542001 PDLIM3Q53GG5 364 aaPredicted RBP14.07□□□□□ -0.16
VARS2-212ENST00000542001 TPRX1Q8N7U7 411 aa14.07□□□□□ -0.16
VARS2-212ENST00000542001 EDEM2Q9BV94 578 aa14.07□□□□□ -0.16
VARS2-212ENST00000542001 PLAC9Q5JTB6 97 aa14.06□□□□□ -0.16
VARS2-212ENST00000542001 KCNE4Q8WWG9 221 aa14.06□□□□□ -0.16
VARS2-212ENST00000542001 PLEKHF2Q9H8W4 249 aa14.06□□□□□ -0.16
VARS2-212ENST00000542001 USF3Q68DE3 2245 aa14.06□□□□□ -0.16
VARS2-212ENST00000542001 TRAV20A0A0B4J274 112 aa14.06□□□□□ -0.16
VARS2-212ENST00000542001 BCL3P20749 454 aa14.06□□□□□ -0.16
VARS2-212ENST00000542001 NOVA1P51513 510 aaKnown RBP14.06□□□□□ -0.16
VARS2-212ENST00000542001 HIST2H3AQ71DI3 136 aa14.06□□□□□ -0.16
VARS2-212ENST00000542001 NANPQ8TBE9 248 aa14.06□□□□□ -0.16
VARS2-212ENST00000542001 NAA60Q9H7X0 242 aa14.06□□□□□ -0.16
VARS2-212ENST00000542001 C5orf63A6NC05 138 aa14.06□□□□□ -0.16
VARS2-212ENST00000542001 C3orf80F5H4A9 247 aa14.06□□□□□ -0.16
VARS2-212ENST00000542001 FHITP49789 147 aa14.06□□□□□ -0.16
VARS2-212ENST00000542001 SNRPEP62304 92 aaKnown RBP14.06□□□□□ -0.16
VARS2-212ENST00000542001 FGF11Q92914 225 aa14.06□□□□□ -0.16
VARS2-212ENST00000542001 SLC25A28Q96A46 364 aa14.06□□□□□ -0.16
VARS2-212ENST00000542001 RAB33BQ9H082 229 aa14.06□□□□□ -0.16
VARS2-212ENST00000542001 C5orf66Q9H5L9 145 aa14.06□□□□□ -0.16
VARS2-212ENST00000542001 GAB2Q9UQC2 676 aa14.06□□□□□ -0.16
VARS2-212ENST00000542001 A0A0G2JMM0 328 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 A0A1W2PPB8 328 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 A0A1W2PRS3 328 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 KIR3DP1A8MWS1 328 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 CDIPTO14735 213 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 TEX30Q5JUR7 227 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 JMJD6Q6NYC1 403 aaPredicted RBP14.05□□□□□ -0.16
VARS2-212ENST00000542001 SKA3Q8IX90 412 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 UQCC1Q9NVA1 299 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 NKX2-6A6NCS4 301 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 ABCD4O14678 606 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 TMEM127O75204 238 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 CD63P08962 238 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 MEOX1P50221 254 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 SLC36A1Q7Z2H8 476 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 GAPTQ8N292 157 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 TMEM178AQ8NBL3 297 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 SRXN1Q9BYN0 137 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 CHST5Q9GZS9 411 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.05□□□□□ -0.163e-7■■■□□ 17
VARS2-212ENST00000542001 FIGNL2A6NMB9 653 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 YKT6O15498 198 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 NPBWR2P48146 333 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 LSM6P62312 80 aaKnown RBP14.05□□□□□ -0.16
VARS2-212ENST00000542001 UBALD2Q8IYN6 164 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 OR1K1Q8NGR3 316 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 PIK3IP1Q96FE7 263 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 PLEKHA2Q9HB19 425 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 RASL12Q9NYN1 266 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 EFNA2O43921 213 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 CST4P01036 141 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 IRF2P14316 349 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 SSTP61278 116 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 RUNX1Q01196 453 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 TLE4Q04727 773 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 C1orf100Q5SVJ3 147 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 ZNF573Q86YE8 665 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 SAP25Q8TEE9 199 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 ABHD5Q8WTS1 349 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 HPSE2Q8WWQ2 592 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 APOBEC3DQ96AK3 386 aaPredicted RBP14.05□□□□□ -0.16
VARS2-212ENST00000542001 GPR27Q9NS67 375 aa14.05□□□□□ -0.16
VARS2-212ENST00000542001 C3orf85A0A1B0GTC6 90 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 CD1AP06126 327 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 SELEP16581 610 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 IGFBP7Q16270 282 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 LHX4Q969G2 390 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 MUCL1Q96DR8 90 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 PLEKHA3Q9HB20 300 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 STARD10Q9Y365 291 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 TRGV5A0A0B4J1U4 118 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 UBE2G2P60604 165 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 OR8B8Q15620 311 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 NHLRC3Q5JS37 347 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 SLC25A47Q6Q0C1 308 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 HSD17B13Q7Z5P4 300 aaPredicted RBP14.04□□□□□ -0.16
VARS2-212ENST00000542001 POC1BQ8TC44 478 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 FAM173AQ9BQD7 235 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 OR2H1Q9GZK4 316 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 GPR35Q9HC97 309 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 C19orf12Q9NSK7 152 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 SERTAD4Q9NUC0 356 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 TMEM38BQ9NVV0 291 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 TINAGQ9UJW2 476 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 KPTNQ9Y664 436 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 THADAQ6YHU6 1953 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 TERTO14746 1132 aaKnown RBP14.04□□□□□ -0.16
VARS2-212ENST00000542001 TAAR5O14804 337 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 AGFG2O95081 481 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 P2RY4P51582 365 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 HBG1P69891 147 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 HBG2P69892 147 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 SRPXP78539 464 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms