RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 KNG1P01042 644 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 PRDX2P32119 198 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 TNFSF8P32971 234 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 GABRA2P47869 451 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 PDLIM4P50479 330 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 ART1P52961 327 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 TMEM50BP56557 158 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 SCAND1P57086 179 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 TMEM33P57088 247 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 BTG1P62324 171 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 ZNF146Q15072 292 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 MICBQ29980 383 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 SMIM21Q3B7S5 101 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 NHLRC3Q5JS37 347 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 UBE2NLQ5JXB2 153 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 STUMQ69YW2 141 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 LYPD2Q6UXB3 125 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 CDH24Q86UP0 819 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 LRRC28Q86X40 367 aaPredicted RBP7.8□□□□□ -1.16
DDX55-208ENST00000541259 IZUMO1Q8IYV9 350 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 FAM89BQ8N5H3 189 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 OR6Q1Q8NGQ2 317 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 ANGPTL6Q8NI99 470 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 PTX4Q96A99 478 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 MBD6Q96DN6 1003 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 CCL13Q99616 98 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 TMEM246Q9BRR3 403 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 ABCG5Q9H222 651 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 ASH1LQ9NR48 2969 aaKnown RBP7.8□□□□□ -1.16
DDX55-208ENST00000541259 PCDHB16Q9NRJ7 776 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 PTTG2Q9NZH5 202 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 ZNF222Q9UK12 451 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 A3GALT2U3KPV4 340 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 FLNBO75369 2602 aaKnown RBP7.8□□□□□ -1.16
DDX55-208ENST00000541259 CCDC168Q8NDH2 2452 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 WNK2Q9Y3S1 2297 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 TRAV38-1A0A0B4J264 116 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 TRAV24A0A0B4J272 114 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 TMEM82A0PJX8 343 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 ISPDA4D126 451 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 FAM25AB3EWG3 89 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 FAM25CB3EWG5 89 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 FAM25GB3EWG6 89 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 RAB27BO00194 218 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 SH2D1BO14796 132 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 DEGS1O15121 323 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 FCN3O75636 299 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 OR7C1O76099 320 aaPredicted RBP7.79□□□□□ -1.16
DDX55-208ENST00000541259 OR2H2O95918 312 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 HAND1O96004 215 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 SELLP14151 372 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 MUC1P15941 1255 aaPredicted RBP7.79□□□□□ -1.16
DDX55-208ENST00000541259 LORP23490 312 aaPredicted RBP7.79□□□□□ -1.16
DDX55-208ENST00000541259 CDK2P24941 298 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 GIFP27352 417 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 BLVRBP30043 206 aaPredicted RBP7.79□□□□□ -1.16
DDX55-208ENST00000541259 GPR6P46095 362 aaPredicted RBP7.79□□□□□ -1.16
DDX55-208ENST00000541259 PITPNBP48739 271 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 COL10A1Q03692 680 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 IKZF1Q13422 519 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 IL13RA2Q14627 380 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 PLAC9Q5JTB6 97 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 SPIN3Q5JUX0 258 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 DNM1P46Q6ZS02 220 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 FGFRL1Q8N441 504 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 BPIFB2Q8N4F0 458 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 OR4M1Q8NGD0 313 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 C10orf105Q8TEF2 133 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 RAB1CQ92928 201 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 MRPS24Q96EL2 167 aaKnown RBP7.79□□□□□ -1.16
DDX55-208ENST00000541259 GAFA1Q96PS6 74 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 URM1Q9BTM9 101 aaKnown RBP7.79□□□□□ -1.16
DDX55-208ENST00000541259 NARFLQ9H6Q4 476 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 BARX1Q9HBU1 254 aaPredicted RBP7.79□□□□□ -1.16
DDX55-208ENST00000541259 ELF5Q9UKW6 265 aaPredicted RBP7.79□□□□□ -1.16
DDX55-208ENST00000541259 EDARQ9UNE0 448 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 MAB21L2Q9Y586 359 aa7.79□□□□□ -1.16
DDX55-208ENST00000541259 TRAV18A0A075B6X5 111 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 IGHV4-30-2A0A087WSY4 118 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 METTL21EPA6NDL7 271 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 SLC33A1O00400 549 aaPredicted RBP7.78□□□□□ -1.16
DDX55-208ENST00000541259 HSPB6O14558 160 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 PSPNO60542 156 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 APOA1P02647 267 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 PTHLHP12272 177 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 ZNF44P15621 663 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 GNB3P16520 340 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 CPT2P23786 658 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 CHATP28329 748 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 MDH2P40926 338 aaKnown RBP7.78□□□□□ -1.16
DDX55-208ENST00000541259 RANBP1P43487 201 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 CLEC12BQ2HXU8 276 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 NKAPLQ5M9Q1 402 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 ATAD3CQ5T2N8 411 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 ATPAF1Q5TC12 328 aaPredicted RBP7.78□□□□□ -1.16
DDX55-208ENST00000541259 OLFML2AQ68BL7 652 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 CNIH2Q6PI25 160 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 FIP1L1Q6UN15 594 aaKnown RBP7.78□□□□□ -1.16
DDX55-208ENST00000541259 ZNF788Q6ZQV5 615 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 C6orf201Q7Z4U5 140 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms