RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	EHF	Q9NZC4	300 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	RHBDD3	Q9Y3P4	386 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	GPR37	O15354	613 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CST4	P01036	141 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	FST	P19883	344 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	QRFP	P83859	136 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	C16orf47	Q6ZP98	133 aa	Predicted RBP	4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	OR10D4P	Q8NGN7	298 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	FAM57A	Q8TBR7	257 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	THRSP	Q92748	146 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	REEP6	Q96HR9	211 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	FAM71F1	Q96KD3	344 aa	Predicted RBP	4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	GPER1	Q99527	375 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ULBP2	Q9BZM5	246 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	LPAR5	Q9H1C0	372 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	PARP11	Q9NR21	331 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CLDN16	Q9Y5I7	305 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	PRUNE2	Q8WUY3	3088 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	PCDH15	Q96QU1	1955 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ZNF729	A6NN14	1252 aa	Predicted RBP	4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783		H3BMH7	237 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	WRB	O00258	174 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	GATC	O43716	136 aa	Known RBP	4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	RAMP1	O60894	148 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	OR2C1	O95371	312 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	TTR	P02766	147 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	COX6B1	P14854	86 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	PPP1CC	P36873	323 aa	Known RBP	4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SNCA	P37840	140 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	HTR5A	P47898	357 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	FOXL2	P58012	376 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	RPS23	P62266	143 aa	Known RBP	4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ZNF239	Q16600	458 aa	Known RBP	4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	TMEM268	Q5VZI3	342 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	LYPD6	Q86Y78	171 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SLC22A24	Q8N4F4	322 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	LIPH	Q8WWY8	451 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	MRPL24	Q96A35	216 aa	Known RBP	4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	OXGR1	Q96P68	337 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CALHM2	Q9HA72	323 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ZNF107	Q9UII5	783 aa	Predicted RBP	4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	MRPS28	Q9Y2Q9	187 aa	Known RBP	4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	NOTCH2	Q04721	2471 aa		4.94	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ZFYVE26	Q68DK2	2539 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SLC33A1	O00400	549 aa	Predicted RBP	4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SELL	P14151	372 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SERPINA2	P20848	420 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SNU13	P55769	128 aa	Known RBP	4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ZNF674	Q2M3X9	581 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	FNDC7	Q5VTL7	733 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	AADACL3	Q5VUY0	350 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ZNF529	Q6P280	563 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SPNS3	Q6ZMD2	512 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ZNF519	Q8TB69	540 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SF3B5	Q9BWJ5	86 aa	Known RBP	4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	TXNIP	Q9H3M7	391 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ELL3	Q9HB65	397 aa	Predicted RBP	4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	WFDC1	Q9HC57	220 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ZNF701	Q9NV72	531 aa	Predicted RBP	4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CEP192	Q8TEP8	1941 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	RP1L1	Q8IWN7	2480 aa	Predicted RBP	4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	APC2	O95996	2303 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	PCNX3	Q9H6A9	2034 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	MUC3A	Q02505	3323 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	IGKV1D-8	A0A087WSZ0	117 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	LOC390937	A0A1W2PQ73	354 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SHISA8	B8ZZ34	492 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ZNF878	C9JN71	531 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SRSF10	O75494	262 aa	Known RBP	4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	IFNA17	P01571	189 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	HCK	P08631	526 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CD37	P11049	281 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ZNF20	P17024	532 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	S100A2	P29034	98 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CHRNB4	P30926	498 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	RBMX	P38159	391 aa	Known RBP	4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	EIF5A	P63241	154 aa	Known RBP	4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	TSPO2	Q5TGU0	170 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	MDS2	Q8NDY4	140 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	FAM213B	Q8TBF2	198 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SGK3	Q96BR1	496 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	HDHD3	Q9BSH5	251 aa	Predicted RBP	4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ABHD14A	Q9BUJ0	271 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SFXN3	Q9BWM7	321 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	PBOV1	Q9GZY1	135 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	DOK5	Q9P104	306 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	LOC102725191	A0A1B0GVB3	256 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783		E9PLN8	166 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	BPNT1	O95861	308 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	HPN	P05981	417 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	FOSL1	P15407	271 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	HIST1H1D	P16402	221 aa	Known RBP	4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	KLK2	P20151	261 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	MPZ	P25189	248 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CTSS	P25774	331 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	EFNA3	P52797	238 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CCL20	P78556	96 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	PCK2	Q16822	640 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	C4orf17	Q53FE4	359 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	NSUN5P2	Q63ZY6	315 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms