RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 RAB18Q9NP72 206 aa8.6□□□□□ -1.03
PHC1-208ENST00000540574 ERRFI1Q9UJM3 462 aaPredicted RBP8.6□□□□□ -1.03
PHC1-208ENST00000540574 FRYQ5TBA9 3013 aa8.6□□□□□ -1.03
PHC1-208ENST00000540574 ZFP92A6NM28 416 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 CD300LBA8K4G0 201 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 DEGS1O15121 323 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 TXNL1O43396 289 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 IFNA5P01569 189 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 CD74P04233 296 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 GP1BAP07359 652 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 FGF5P12034 268 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 IL2RGP31785 369 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 GABRA2P47869 451 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 MRPL49Q13405 166 aaKnown RBP8.59□□□□□ -1.03
PHC1-208ENST00000540574 CLEC12BQ2HXU8 276 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 FAM166AQ6J272 317 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 TIPARPQ7Z3E1 657 aaKnown RBP8.59□□□□□ -1.03
PHC1-208ENST00000540574 CALHM1Q8IU99 346 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 TMEM123Q8N131 208 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 INTS12Q96CB8 462 aaKnown RBP8.59□□□□□ -1.03
PHC1-208ENST00000540574 SDSLQ96GA7 329 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 GLS2Q9UI32 602 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 EDARQ9UNE0 448 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 STARD10Q9Y365 291 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 IGLV3-12A0A075B6K2 115 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 H0YIZ8 118 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 MSTNO14793 375 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 SOX15O60248 233 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 CALCRP30988 508 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 ELLP55199 621 aaPredicted RBP8.59□□□□□ -1.03
PHC1-208ENST00000540574 RAB2AP61019 212 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 FAM27BQ5VT28 67 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 STX12Q86Y82 276 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 TRIB1Q96RU8 372 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 FREM2Q5SZK8 3169 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 MFNGO00587 321 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 ADAM20O43506 726 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 PDCD6O75340 191 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 HPP00738 406 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 SERPINA7P05543 415 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 SRSF3P84103 164 aaKnown RBP8.59□□□□□ -1.03
PHC1-208ENST00000540574 LCN15Q6UWW0 184 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 M1APQ8TC57 530 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 KCNE4Q8WWG9 221 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 TLNRD1Q9H1K6 362 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 DEPPQ9NTK1 212 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 GHRLQ9UBU3 117 aa8.59□□□□□ -1.03
PHC1-208ENST00000540574 TMEM218A2RU14 115 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 WIPF3A6NGB9 483 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 SCTP09683 121 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 SFTA3P0C7M3 94 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 MEOX1P50221 254 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 SPINK9Q5DT21 86 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 FAM122CQ6P4D5 195 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 SSX9Q7RTT3 188 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 PUSL1Q8N0Z8 303 aaKnown RBP8.58□□□□□ -1.04
PHC1-208ENST00000540574 OR10J5Q8NHC4 309 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 CCL28Q9NRJ3 127 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 MUC22E2RYF6 1773 aaPredicted RBP8.58□□□□□ -1.04
PHC1-208ENST00000540574 PINLYPA6NC86 204 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 RNASEK-C17orf49H0YIS7 233 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 KLRC4-KLRK1H3BQV0 150 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 YKT6O15498 198 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 RPS10P46783 165 aaKnown RBP8.58□□□□□ -1.04
PHC1-208ENST00000540574 SSPNQ14714 243 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 SPANXN5Q5MJ07 72 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 RTL6Q6ICC9 239 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 RPUSD3Q6P087 351 aaKnown RBP8.58□□□□□ -1.04
PHC1-208ENST00000540574 HSD17B13Q7Z5P4 300 aaPredicted RBP8.58□□□□□ -1.04
PHC1-208ENST00000540574 PPP1R32Q7Z5V6 425 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 TPRX1Q8N7U7 411 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 EDEM2Q9BV94 578 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 WDR54Q9H977 334 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 FN3KRPQ9HA64 309 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 PURGQ9UJV8 347 aaKnown RBP8.58□□□□□ -1.04
PHC1-208ENST00000540574 DEFB108AA8MXU0 73 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 SYNGR1O43759 233 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 JTBO76095 146 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 IGHEP01854 428 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 ARG1P05089 322 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 FCGR3AP08637 254 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 RD3LP0DJH9 198 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 SUMF2Q8NBJ7 301 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 PTX4Q96A99 478 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 IMMP1LQ96LU5 166 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 TAAR9Q96RI9 348 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 SPIN2AQ99865 258 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 SPIN2BQ9BPZ2 258 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 FOXJ2Q9P0K8 574 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 TECTAO75443 2155 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 CEP295Q9C0D2 2601 aa8.58□□□□□ -1.04
PHC1-208ENST00000540574 NKX2-6A6NCS4 301 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 HOXD4P09016 255 aaPredicted RBP8.57□□□□□ -1.04
PHC1-208ENST00000540574 TESK1Q15569 626 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 HES3Q5TGS1 186 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 WDR5BQ86VZ2 330 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 GAPTQ8N292 157 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 OR52M1Q8NGK5 317 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 NAA60Q9H7X0 242 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 PRSS50Q9UI38 385 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms