RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 ELL3Q9HB65 397 aaPredicted RBP18.2■□□□□ 0.5
TRIM65-202ENST00000540128 PCDHB16Q9NRJ7 776 aa18.2■□□□□ 0.5
TRIM65-202ENST00000540128 TRDV1A0A1B0GX56 115 aa18.19■□□□□ 0.5
TRIM65-202ENST00000540128 ARL6IP5O75915 188 aa18.19■□□□□ 0.5
TRIM65-202ENST00000540128 TNFAIP8O95379 198 aa18.19■□□□□ 0.5
TRIM65-202ENST00000540128 GPR176Q14439 515 aa18.19■□□□□ 0.5
TRIM65-202ENST00000540128 IL13RA2Q14627 380 aa18.19■□□□□ 0.5
TRIM65-202ENST00000540128 KLF17Q5JT82 389 aaPredicted RBP18.19■□□□□ 0.5
TRIM65-202ENST00000540128 C1orf100Q5SVJ3 147 aa18.19■□□□□ 0.5
TRIM65-202ENST00000540128 ASCC1Q8N9N2 400 aaKnown RBP18.19■□□□□ 0.5
TRIM65-202ENST00000540128 TBC1D15Q8TC07 691 aa18.19■□□□□ 0.5
TRIM65-202ENST00000540128 MUL1Q969V5 352 aa18.19■□□□□ 0.5
TRIM65-202ENST00000540128 WDFY2Q96P53 400 aa18.19■□□□□ 0.5
TRIM65-202ENST00000540128 EXOSC4Q9NPD3 245 aaKnown RBP18.19■□□□□ 0.5
TRIM65-202ENST00000540128 PSPNO60542 156 aa18.18■□□□□ 0.5
TRIM65-202ENST00000540128 HTR3BO95264 441 aa18.18■□□□□ 0.5
TRIM65-202ENST00000540128 OR2H2O95918 312 aa18.18■□□□□ 0.5
TRIM65-202ENST00000540128 PSMB9P28065 219 aa18.18■□□□□ 0.5
TRIM65-202ENST00000540128 ARF6P62330 175 aa18.18■□□□□ 0.5
TRIM65-202ENST00000540128 GLT8D1Q68CQ7 371 aa18.18■□□□□ 0.5
TRIM65-202ENST00000540128 OR4D6Q8NGJ1 314 aa18.18■□□□□ 0.5
TRIM65-202ENST00000540128 OR10K1Q8NGX5 313 aa18.18■□□□□ 0.5
TRIM65-202ENST00000540128 PPP1R35Q8TAP8 253 aa18.18■□□□□ 0.5
TRIM65-202ENST00000540128 C1orf147Q96MC9 270 aaPredicted RBP18.18■□□□□ 0.5
TRIM65-202ENST00000540128 TBX15Q96SF7 602 aa18.18■□□□□ 0.5
TRIM65-202ENST00000540128 S100A13Q99584 98 aa18.18■□□□□ 0.5
TRIM65-202ENST00000540128 SLITRK2Q9H156 845 aa18.18■□□□□ 0.5
TRIM65-202ENST00000540128 ZNF696Q9H7X3 374 aa18.18■□□□□ 0.5
TRIM65-202ENST00000540128 C19orf12Q9NSK7 152 aa18.18■□□□□ 0.5
TRIM65-202ENST00000540128 MRPS28Q9Y2Q9 187 aaKnown RBP18.18■□□□□ 0.5
TRIM65-202ENST00000540128 A0A087WXM4 84 aa18.17■□□□□ 0.5
TRIM65-202ENST00000540128 A0A0G2JK05 382 aa18.17■□□□□ 0.5
TRIM65-202ENST00000540128 DEGS1O15121 323 aa18.17■□□□□ 0.5
TRIM65-202ENST00000540128 TOX4O94842 621 aa18.17■□□□□ 0.5
TRIM65-202ENST00000540128 SNU13P55769 128 aaKnown RBP18.17■□□□□ 0.5
TRIM65-202ENST00000540128 RPL31P62899 125 aaKnown RBP18.17■□□□□ 0.5
TRIM65-202ENST00000540128 SCGB2A2Q13296 93 aa18.17■□□□□ 0.5
TRIM65-202ENST00000540128 TUSC1Q2TAM9 212 aa18.17■□□□□ 0.5
TRIM65-202ENST00000540128 METTL11BQ5VVY1 283 aa18.17■□□□□ 0.5
TRIM65-202ENST00000540128 TMEM200BQ69YZ2 307 aa18.17■□□□□ 0.5
TRIM65-202ENST00000540128 GLIPR1L1Q6UWM5 242 aa18.17■□□□□ 0.5
TRIM65-202ENST00000540128 PRIMA1Q86XR5 153 aa18.17■□□□□ 0.5
TRIM65-202ENST00000540128 OSR2Q8N2R0 312 aa18.17■□□□□ 0.5
TRIM65-202ENST00000540128 TSPAN14Q8NG11 270 aa18.17■□□□□ 0.5
TRIM65-202ENST00000540128 OR4S1Q8NGB4 309 aa18.17■□□□□ 0.5
TRIM65-202ENST00000540128 IFT22Q9H7X7 185 aa18.17■□□□□ 0.5
TRIM65-202ENST00000540128 GHRLQ9UBU3 117 aa18.17■□□□□ 0.5
TRIM65-202ENST00000540128 NUP50Q9UKX7 468 aa18.17■□□□□ 0.5
TRIM65-202ENST00000540128 TRIM64CA6NLI5 447 aa18.16■□□□□ 0.5
TRIM65-202ENST00000540128 M0R1W7 72 aa18.16■□□□□ 0.5
TRIM65-202ENST00000540128 MGST3O14880 152 aa18.16■□□□□ 0.5
TRIM65-202ENST00000540128 IFNA2P01563 188 aa18.16■□□□□ 0.5
TRIM65-202ENST00000540128 CSTBP04080 98 aaKnown RBP18.16■□□□□ 0.5
TRIM65-202ENST00000540128 GABRR1P24046 479 aa18.16■□□□□ 0.5
TRIM65-202ENST00000540128 OR3A1P47881 315 aa18.16■□□□□ 0.5
TRIM65-202ENST00000540128 SLC22A6Q4U2R8 563 aa18.16■□□□□ 0.5
TRIM65-202ENST00000540128 CMTM4Q8IZR5 234 aa18.16■□□□□ 0.5
TRIM65-202ENST00000540128 MRPS24Q96EL2 167 aaKnown RBP18.16■□□□□ 0.5
TRIM65-202ENST00000540128 UNKLQ9H9P5 680 aaKnown RBP18.16■□□□□ 0.5
TRIM65-202ENST00000540128 TRAV1-2A0A0B4J238 106 aa18.15■□□□□ 0.5
TRIM65-202ENST00000540128 SIRPB1O00241 398 aa18.15■□□□□ 0.5
TRIM65-202ENST00000540128 SLC33A1O00400 549 aaPredicted RBP18.15■□□□□ 0.5
TRIM65-202ENST00000540128 CSN2P05814 226 aa18.15■□□□□ 0.5
TRIM65-202ENST00000540128 GTF2F2P13984 249 aa18.15■□□□□ 0.5
TRIM65-202ENST00000540128 ZNF44P15621 663 aa18.15■□□□□ 0.5
TRIM65-202ENST00000540128 EPHA1P21709 976 aa18.15■□□□□ 0.5
TRIM65-202ENST00000540128 CALRP27797 417 aaKnown RBP18.15■□□□□ 0.5
TRIM65-202ENST00000540128 ERP29P30040 261 aaKnown RBP18.15■□□□□ 0.5
TRIM65-202ENST00000540128 MEF2CQ06413 473 aaPredicted RBP18.15■□□□□ 0.5
TRIM65-202ENST00000540128 PDCD1Q15116 288 aa18.15■□□□□ 0.5
TRIM65-202ENST00000540128 GRK1Q15835 563 aa18.15■□□□□ 0.5
TRIM65-202ENST00000540128 GDPD3Q7L5L3 318 aa18.15■□□□□ 0.5
TRIM65-202ENST00000540128 LINC00596Q86U02 117 aa18.15■□□□□ 0.5
TRIM65-202ENST00000540128 Q8N7P7 452 aa18.15■□□□□ 0.5
TRIM65-202ENST00000540128 NR1H4Q96RI1 486 aaPredicted RBP18.15■□□□□ 0.5
TRIM65-202ENST00000540128 GFI1Q99684 422 aa18.15■□□□□ 0.5
TRIM65-202ENST00000540128 PCGF1Q9BSM1 259 aa18.15■□□□□ 0.5
TRIM65-202ENST00000540128 ST3GAL6Q9Y274 331 aa18.15■□□□□ 0.5
TRIM65-202ENST00000540128 SVEP1Q4LDE5 3571 aa18.15■□□□□ 0.5
TRIM65-202ENST00000540128 A0A1W2PQ09 198 aa18.14■□□□□ 0.49
TRIM65-202ENST00000540128 IGHV4-38-2P0DP08 117 aa18.14■□□□□ 0.49
TRIM65-202ENST00000540128 FGF9P31371 208 aaPredicted RBP18.14■□□□□ 0.49
TRIM65-202ENST00000540128 RBM11P57052 281 aaKnown RBP18.14■□□□□ 0.49
TRIM65-202ENST00000540128 BPIFB3P59826 476 aa18.14■□□□□ 0.49
TRIM65-202ENST00000540128 SCN1BQ07699 218 aa18.14■□□□□ 0.49
TRIM65-202ENST00000540128 PIGYQ3MUY2 71 aa18.14■□□□□ 0.49
TRIM65-202ENST00000540128 AWAT2Q6E213 333 aa18.14■□□□□ 0.49
TRIM65-202ENST00000540128 C9orf139Q6ZV77 190 aa18.14■□□□□ 0.49
TRIM65-202ENST00000540128 FAM185AQ8N0U4 392 aa18.14■□□□□ 0.49
TRIM65-202ENST00000540128 C11orf42Q8N5U0 333 aa18.14■□□□□ 0.49
TRIM65-202ENST00000540128 OR4M1Q8NGD0 313 aa18.14■□□□□ 0.49
TRIM65-202ENST00000540128 ONECUT1Q9UBC0 465 aa18.14■□□□□ 0.49
TRIM65-202ENST00000540128 TRAV24A0A0B4J272 114 aa18.13■□□□□ 0.49
TRIM65-202ENST00000540128 A0A1W2PP11 408 aa18.13■□□□□ 0.49
TRIM65-202ENST00000540128 A0A1W2PPH5 198 aa18.13■□□□□ 0.49
TRIM65-202ENST00000540128 SLC22A1O15245 554 aa18.13■□□□□ 0.49
TRIM65-202ENST00000540128 UBBP0CG47 229 aa18.13■□□□□ 0.49
TRIM65-202ENST00000540128 SERPINA2P20848 420 aa18.13■□□□□ 0.49
TRIM65-202ENST00000540128 PSMD7P51665 324 aa18.13■□□□□ 0.49
TRIM65-202ENST00000540128 NEDD8Q15843 81 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms