RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 POLR2GP62487 172 aaKnown RBP eCLIP8.78□□□□□ -1
TRAF1-202ENST00000540010 IGSF11Q5DX21 431 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 LAMTOR1Q6IAA8 161 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 ZNF429Q86V71 674 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 BMPERQ8N8U9 685 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 LRRC75AQ8NAA5 344 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 OR8B12Q8NGG6 310 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 TMEM37Q8WXS4 190 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 WDR13Q9H1Z4 485 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 LHX6Q9UPM6 363 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 HDGFL3Q9Y3E1 203 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 IGHV1-45A0A0A0MS14 117 aa8.77□□□□□ -1
TRAF1-202ENST00000540010 PNPP00491 289 aa8.77□□□□□ -1
TRAF1-202ENST00000540010 KRASP01116 189 aa8.77□□□□□ -1
TRAF1-202ENST00000540010 ACP1P24666 158 aa8.77□□□□□ -1
TRAF1-202ENST00000540010 CLDN15P56746 228 aa8.77□□□□□ -1
TRAF1-202ENST00000540010 RAB1AP62820 205 aa8.77□□□□□ -1
TRAF1-202ENST00000540010 RPP30P78346 268 aaKnown RBP8.77□□□□□ -1
TRAF1-202ENST00000540010 MOGAT2Q3SYC2 334 aa8.77□□□□□ -1
TRAF1-202ENST00000540010 AWAT1Q58HT5 328 aa8.77□□□□□ -1
TRAF1-202ENST00000540010 ZNF439Q8NDP4 499 aa8.77□□□□□ -1
TRAF1-202ENST00000540010 EXTL1Q92935 676 aa8.77□□□□□ -1
TRAF1-202ENST00000540010 ADAT3Q96EY9 351 aaPredicted RBP8.77□□□□□ -1
TRAF1-202ENST00000540010 FUT3P21217 361 aa8.77□□□□□ -1.01
TRAF1-202ENST00000540010 KIR3DL2P43630 455 aa8.77□□□□□ -1.01
TRAF1-202ENST00000540010 LINC01590Q5TEZ4 76 aa8.77□□□□□ -1.01
TRAF1-202ENST00000540010 OR2A2Q6IF42 318 aa8.77□□□□□ -1.01
TRAF1-202ENST00000540010 ZNF774Q6NX45 483 aa8.77□□□□□ -1.01
TRAF1-202ENST00000540010 H2BFWTQ7Z2G1 175 aa8.77□□□□□ -1.01
TRAF1-202ENST00000540010 UHRF2Q96PU4 802 aa8.77□□□□□ -1.01
TRAF1-202ENST00000540010 EDEM2Q9BV94 578 aa8.77□□□□□ -1.01
TRAF1-202ENST00000540010 PRO1933Q9H354 126 aa8.77□□□□□ -1.01
TRAF1-202ENST00000540010 RASL12Q9NYN1 266 aa8.77□□□□□ -1.01
TRAF1-202ENST00000540010 VSIG4Q9Y279 399 aa8.77□□□□□ -1.01
TRAF1-202ENST00000540010 COL6A3P12111 3177 aa8.77□□□□□ -1.01
TRAF1-202ENST00000540010 ZNF732B4DXR9 585 aa8.77□□□□□ -1.01
TRAF1-202ENST00000540010 B4E171 279 aa8.77□□□□□ -1.01
TRAF1-202ENST00000540010 C17orf112F2Z3M2 114 aa8.77□□□□□ -1.01
TRAF1-202ENST00000540010 UMODP07911 640 aa8.77□□□□□ -1.01
TRAF1-202ENST00000540010 CYC1P08574 325 aa8.77□□□□□ -1.01
TRAF1-202ENST00000540010 MGST1P10620 155 aaKnown RBP8.77□□□□□ -1.01
TRAF1-202ENST00000540010 TSPAN7P41732 249 aa8.77□□□□□ -1.01
TRAF1-202ENST00000540010 GPM6AP51674 278 aa8.77□□□□□ -1.01
TRAF1-202ENST00000540010 UBE2G2P60604 165 aa8.77□□□□□ -1.01
TRAF1-202ENST00000540010 INSM1Q01101 510 aaPredicted RBP8.77□□□□□ -1.01
TRAF1-202ENST00000540010 LHFPL2Q6ZUX7 228 aa8.77□□□□□ -1.01
TRAF1-202ENST00000540010 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.77□□□□□ -1.01
TRAF1-202ENST00000540010 SLC25A42Q86VD7 318 aa8.77□□□□□ -1.01
TRAF1-202ENST00000540010 MS4A3Q96HJ5 214 aa8.77□□□□□ -1.01
TRAF1-202ENST00000540010 THOC3Q96J01 351 aaKnown RBP8.77□□□□□ -1.01
TRAF1-202ENST00000540010 DXOO77932 396 aaKnown RBP8.76□□□□□ -1.01
TRAF1-202ENST00000540010 CCL2P13500 99 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 HOXA1P49639 335 aaPredicted RBP8.76□□□□□ -1.01
TRAF1-202ENST00000540010 NR2C2APQ86WQ0 139 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 PUSL1Q8N0Z8 303 aaKnown RBP8.76□□□□□ -1.01
TRAF1-202ENST00000540010 ADPRHL1Q8NDY3 354 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 TAAR9Q96RI9 348 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 SLC35B3Q9H1N7 401 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 PSENENQ9NZ42 101 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 FER1L5A0AVI2 2057 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 VCANP13611 3396 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 A0A1W2PR80 420 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 C7orf77A4D0Y5 90 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 CTXN2P0C2S0 81 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 COX6A1P12074 109 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 RCC1P18754 421 aaPredicted RBP8.76□□□□□ -1.01
TRAF1-202ENST00000540010 FKBP2P26885 142 aaKnown RBP8.76□□□□□ -1.01
TRAF1-202ENST00000540010 THBS4P35443 961 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 C9orf152Q5JTZ5 239 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 WIPI1Q5MNZ9 446 aaPredicted RBP8.76□□□□□ -1.01
TRAF1-202ENST00000540010 OR2C3Q8N628 320 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 UBAC2Q8NBM4 344 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 TIMP4Q99727 224 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 LPAR3Q9UBY5 353 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 KCNK7Q9Y2U2 307 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 V9GYS6 101 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 FREM3P0C091 2139 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 WNK2Q9Y3S1 2297 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 ADAM20O43506 726 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 DHRS3O75911 302 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 ZNF32P17041 273 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 PLGLAQ15195 96 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 PLPPR5Q32ZL2 321 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 DHRS13Q6UX07 377 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 CATSPERDQ86XM0 798 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 STPG2Q8N412 459 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 M1APQ8TC57 530 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 SLC39A7Q92504 469 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 MRPL24Q96A35 216 aaKnown RBP8.76□□□□□ -1.01
TRAF1-202ENST00000540010 FOXB1Q99853 325 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 SHARPINQ9H0F6 387 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 TCFL5Q9UL49 500 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 CCDC187A0A096LP49 1063 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 LMX1BO60663 402 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 KLF7O75840 302 aaPredicted RBP8.76□□□□□ -1.01
TRAF1-202ENST00000540010 ZNF883P0CG24 379 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 CD46P15529 392 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 BMP5P22003 454 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 ARL3P36405 182 aa8.76□□□□□ -1.01
TRAF1-202ENST00000540010 TMEM255AQ5JRV8 349 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms