RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 WDR86Q86TI4 376 aa12.63□□□□□ -0.39
ATL3-203ENST00000538786 FAM58AQ8N1B3 248 aa12.63□□□□□ -0.39
ATL3-203ENST00000538786 ELMOD3Q96FG2 381 aa12.63□□□□□ -0.39
ATL3-203ENST00000538786 SFXN3Q9BWM7 321 aa12.63□□□□□ -0.39
ATL3-203ENST00000538786 CLEC4MQ9H2X3 399 aaPredicted RBP12.63□□□□□ -0.39
ATL3-203ENST00000538786 SHPKQ9UHJ6 478 aa12.63□□□□□ -0.39
ATL3-203ENST00000538786 IGHV1-18A0A0C4DH31 117 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 RFPL4AA6NLU0 287 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 MCRIP1C9JLW8 97 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 RFPL4AL1F8VTS6 287 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 L7N2F9 121 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 RHBDL1O75783 438 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 CXCL2P19875 107 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 SUPT4H1P63272 117 aaKnown RBP12.62□□□□□ -0.39
ATL3-203ENST00000538786 SORDQ00796 357 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 FGL1Q08830 312 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 TEX261Q6UWH6 196 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 Q6ZPA2 131 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 KCTD9Q7L273 389 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 C1orf174Q8IYL3 243 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 OR8H1Q8NGG4 311 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 ZNF488Q96MN9 340 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 PDCD10Q9BUL8 212 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 CHMP1AQ9HD42 196 aaPredicted RBP12.62□□□□□ -0.39
ATL3-203ENST00000538786 POLDIP2Q9Y2S7 368 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 U3KQ87 197 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 FXYD6-FXYD2A0A087WZ82 144 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 IGHV2OR16-5A0A0B4J2B6 119 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 CCSO14618 274 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 NAPSAO96009 420 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 CTSDP07339 412 aaPredicted RBP12.62□□□□□ -0.39
ATL3-203ENST00000538786 OR8G1Q15617 311 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 TIMM23BQ5SRD1 257 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 C3P1Q6ZMU1 363 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 Q8IYB0 196 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 SCCPDHQ8NBX0 429 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 OR8G5Q8NG78 346 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 COQ8AQ8NI60 647 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 GTF3AQ92664 365 aaKnown RBP12.62□□□□□ -0.39
ATL3-203ENST00000538786 FXYD6Q9H0Q3 95 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 WDR13Q9H1Z4 485 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 LIME1Q9H400 295 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 IFT22Q9H7X7 185 aa12.62□□□□□ -0.39
ATL3-203ENST00000538786 PURGQ9UJV8 347 aaKnown RBP12.62□□□□□ -0.39
ATL3-203ENST00000538786 TMEM210A6NLX4 147 aa12.61□□□□□ -0.39
ATL3-203ENST00000538786 M0R233 179 aa12.61□□□□□ -0.39
ATL3-203ENST00000538786 GLAP06280 429 aa12.61□□□□□ -0.39
ATL3-203ENST00000538786 RPS2P15880 293 aaKnown RBP12.61□□□□□ -0.39
ATL3-203ENST00000538786 DUSP1P28562 367 aa12.61□□□□□ -0.39
ATL3-203ENST00000538786 TDGF1P3P51864 188 aa12.61□□□□□ -0.39
ATL3-203ENST00000538786 SLC9A3R2Q15599 337 aa12.61□□□□□ -0.39
ATL3-203ENST00000538786 IGFBP7Q16270 282 aa12.61□□□□□ -0.39
ATL3-203ENST00000538786 Q8NA96 180 aa12.61□□□□□ -0.39
ATL3-203ENST00000538786 SLX1AQ9BQ83 275 aa12.61□□□□□ -0.39
ATL3-203ENST00000538786 RIMS4Q9H426 269 aaPredicted RBP12.61□□□□□ -0.39
ATL3-203ENST00000538786 TMEM100Q9NV29 134 aa12.61□□□□□ -0.39
ATL3-203ENST00000538786 DCHS1Q96JQ0 3298 aa12.61□□□□□ -0.39
ATL3-203ENST00000538786 TRAV14DV4A0A0A6YYC5 116 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 ARPC5O15511 151 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 NOS1APO75052 506 aaPredicted RBP12.6□□□□□ -0.39
ATL3-203ENST00000538786 KNG1P01042 644 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 GLI4P10075 376 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 KITLGP21583 273 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 GLP1RP43220 463 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 ERVK11-1P61568 191 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 OPCMLQ14982 345 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 SUMF2Q8NBJ7 301 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 LILRB4Q8NHJ6 448 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 NEK7Q8TDX7 302 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 SEC22AQ96IW7 307 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 Q9N2K0 584 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 RAB18Q9NP72 206 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 COMMD9Q9P000 198 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 FRYQ5TBA9 3013 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 CFAP47Q6ZTR5 3102 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.6□□□□□ -0.39
ATL3-203ENST00000538786 FAM25EA8MYX2 175 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 MPC2O95563 127 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 ZNF728P0DKX0 622 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 GCH1P30793 250 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 FCGR2CP31995 323 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 ZNF154Q13106 437 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 ZNF718Q3SXZ3 478 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 MBNL2Q5VZF2 373 aaKnown RBP12.6□□□□□ -0.39
ATL3-203ENST00000538786 CISD2Q8N5K1 135 aaKnown RBP12.6□□□□□ -0.39
ATL3-203ENST00000538786 ZNF680Q8NEM1 530 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 S100PBPQ96BU1 408 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 NRIP2Q9BQI9 281 aa12.6□□□□□ -0.39
ATL3-203ENST00000538786 DPCDQ9BVM2 203 aaPredicted RBP12.6□□□□□ -0.39
ATL3-203ENST00000538786 SPTBN4Q9H254 2564 aa12.59□□□□□ -0.39
ATL3-203ENST00000538786 HSPB6O14558 160 aa12.59□□□□□ -0.39
ATL3-203ENST00000538786 PRRG2O14669 202 aa12.59□□□□□ -0.39
ATL3-203ENST00000538786 IFNA2P01563 188 aa12.59□□□□□ -0.39
ATL3-203ENST00000538786 PGA5P0DJD9 388 aa12.59□□□□□ -0.39
ATL3-203ENST00000538786 RPA2P15927 270 aa12.59□□□□□ -0.39
ATL3-203ENST00000538786 SERPINF1P36955 418 aa12.59□□□□□ -0.39
ATL3-203ENST00000538786 HTR2BP41595 481 aa12.59□□□□□ -0.39
ATL3-203ENST00000538786 RBM39Q14498 530 aaKnown RBP12.59□□□□□ -0.39
ATL3-203ENST00000538786 ANKRD55Q3KP44 614 aa12.59□□□□□ -0.39
ATL3-203ENST00000538786 C3orf36Q3SXR2 165 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms