RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 ZSCAN4Q8NAM6 433 aaPredicted RBP12.04□□□□□ -0.48
USP28-204ENST00000537642 ZNF485Q8NCK3 441 aa12.04□□□□□ -0.48
USP28-204ENST00000537642 BEND2Q8NDZ0 799 aa12.04□□□□□ -0.48
USP28-204ENST00000537642 OR52N1Q8NH53 320 aa12.04□□□□□ -0.48
USP28-204ENST00000537642 GPR148Q8TDV2 347 aa12.04□□□□□ -0.48
USP28-204ENST00000537642 SMIM19Q96E16 107 aa12.04□□□□□ -0.48
USP28-204ENST00000537642 RHOFQ9HBH0 211 aa12.04□□□□□ -0.48
USP28-204ENST00000537642 EXOSC4Q9NPD3 245 aaKnown RBP12.04□□□□□ -0.48
USP28-204ENST00000537642 CHCHD3Q9NX63 227 aaKnown RBP12.04□□□□□ -0.48
USP28-204ENST00000537642 TAS2R4Q9NYW5 299 aa12.04□□□□□ -0.48
USP28-204ENST00000537642 GLS2Q9UI32 602 aa12.04□□□□□ -0.48
USP28-204ENST00000537642 CMYA5Q8N3K9 4069 aa12.04□□□□□ -0.48
USP28-204ENST00000537642 EFCAB10A6NFE3 127 aa12.03□□□□□ -0.48
USP28-204ENST00000537642 SH2D1BO14796 132 aa12.03□□□□□ -0.48
USP28-204ENST00000537642 MGST3O14880 152 aa12.03□□□□□ -0.48
USP28-204ENST00000537642 OR2H2O95918 312 aa12.03□□□□□ -0.48
USP28-204ENST00000537642 RBP4P02753 201 aa12.03□□□□□ -0.48
USP28-204ENST00000537642 TMEM225BP0DP42 221 aa12.03□□□□□ -0.48
USP28-204ENST00000537642 RAB3AP20336 220 aa12.03□□□□□ -0.48
USP28-204ENST00000537642 PAX6P26367 422 aa12.03□□□□□ -0.48
USP28-204ENST00000537642 MED21Q13503 144 aa12.03□□□□□ -0.48
USP28-204ENST00000537642 DMKNQ6E0U4 476 aaPredicted RBP12.03□□□□□ -0.48
USP28-204ENST00000537642 Q6P435 159 aa12.03□□□□□ -0.48
USP28-204ENST00000537642 SHISA2Q6UWI4 295 aa12.03□□□□□ -0.48
USP28-204ENST00000537642 OR13C5Q8NGS8 318 aa12.03□□□□□ -0.48
USP28-204ENST00000537642 OR4F5Q8NH21 305 aa12.03□□□□□ -0.48
USP28-204ENST00000537642 TFAP2CQ92754 450 aa12.03□□□□□ -0.48
USP28-204ENST00000537642 TMEM106AQ96A25 262 aa12.03□□□□□ -0.48
USP28-204ENST00000537642 PLCXD1Q9NUJ7 323 aa12.03□□□□□ -0.48
USP28-204ENST00000537642 CNOT2Q9NZN8 540 aaKnown RBP12.03□□□□□ -0.48
USP28-204ENST00000537642 PSORS1C1Q9UIG5 152 aa12.03□□□□□ -0.48
USP28-204ENST00000537642 VPREB3Q9UKI3 123 aa12.03□□□□□ -0.48
USP28-204ENST00000537642 ZNF281Q9Y2X9 895 aa12.03□□□□□ -0.48
USP28-204ENST00000537642 A0A1B0GUS0 222 aa12.02□□□□□ -0.49
USP28-204ENST00000537642 hADV38S2A0JD32 116 aa12.02□□□□□ -0.49
USP28-204ENST00000537642 BTBD17A6NE02 478 aa12.02□□□□□ -0.49
USP28-204ENST00000537642 GABRPO00591 440 aa12.02□□□□□ -0.49
USP28-204ENST00000537642 CD2P06729 351 aa12.02□□□□□ -0.49
USP28-204ENST00000537642 IGHV1-8P0DP01 117 aa12.02□□□□□ -0.49
USP28-204ENST00000537642 LMO1P25800 156 aa12.02□□□□□ -0.49
USP28-204ENST00000537642 ERP29P30040 261 aaKnown RBP12.02□□□□□ -0.49
USP28-204ENST00000537642 GDPGP1Q6ZNW5 385 aa12.02□□□□□ -0.49
USP28-204ENST00000537642 ZFP41Q8N8Y5 198 aa12.02□□□□□ -0.49
USP28-204ENST00000537642 OR5R1Q8NH85 324 aa12.02□□□□□ -0.49
USP28-204ENST00000537642 PPP1R35Q8TAP8 253 aa12.02□□□□□ -0.49
USP28-204ENST00000537642 GHSRQ92847 366 aa12.02□□□□□ -0.49
USP28-204ENST00000537642 ZNF714Q96N38 554 aa12.02□□□□□ -0.49
USP28-204ENST00000537642 NKX3-1Q99801 234 aaPredicted RBP12.02□□□□□ -0.49
USP28-204ENST00000537642 MEGF9Q9H1U4 602 aa12.02□□□□□ -0.49
USP28-204ENST00000537642 VCXQ9H320 206 aa12.02□□□□□ -0.49
USP28-204ENST00000537642 BEX1Q9HBH7 125 aa12.02□□□□□ -0.49
USP28-204ENST00000537642 LINC00312Q9Y6C7 94 aa12.02□□□□□ -0.49
USP28-204ENST00000537642 A0A0G2JK05 382 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 TRBV5-5A0A0J9YX44 114 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 MAGEB3O15480 346 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 ZNF44P15621 663 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 C21orf33P30042 268 aaPredicted RBP12.01□□□□□ -0.49
USP28-204ENST00000537642 P2RX3P56373 397 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 RPS11P62280 158 aaKnown RBP eCLIP12.01□□□□□ -0.49
USP28-204ENST00000537642 SLC34A1Q06495 639 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 SCN1BQ07699 218 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 DOC2BQ14184 412 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 OLFML2AQ68BL7 652 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 ELP2Q6IA86 826 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 AHSA2Q719I0 299 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 LHFPL4Q7Z7J7 247 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 SATL1Q86VE3 508 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 PXT1Q8NFP0 134 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 BPIFB6Q8NFQ5 453 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 SGMS2Q8NHU3 365 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 TNFAIP8L1Q8WVP5 186 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 NRG4Q8WWG1 115 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 ORAI1Q96D31 301 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 PGLYRP3Q96LB9 341 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 GPER1Q99527 375 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 SSX3Q99909 188 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 SLITRK2Q9H156 845 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 PPA2Q9H2U2 334 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 FKBP14Q9NWM8 211 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 PCDHGB5Q9Y5G0 923 aa12.01□□□□□ -0.49
USP28-204ENST00000537642 NBEAL1Q6ZS30 2694 aa12□□□□□ -0.49
USP28-204ENST00000537642 CLPSL1A2RUU4 121 aa12□□□□□ -0.49
USP28-204ENST00000537642 FAM90A8PA6NJQ4 464 aa12□□□□□ -0.49
USP28-204ENST00000537642 ODF3BA8MYP8 253 aa12□□□□□ -0.49
USP28-204ENST00000537642 H3BUX3 64 aa12□□□□□ -0.49
USP28-204ENST00000537642 SLC33A1O00400 549 aaPredicted RBP12□□□□□ -0.49
USP28-204ENST00000537642 ALDOBP05062 364 aa12□□□□□ -0.49
USP28-204ENST00000537642 MTNR1BP49286 362 aa12□□□□□ -0.49
USP28-204ENST00000537642 LGALS4P56470 323 aa12□□□□□ -0.49
USP28-204ENST00000537642 GABPB1Q06547 395 aaPredicted RBP12□□□□□ -0.49
USP28-204ENST00000537642 AESQ08117 197 aa12□□□□□ -0.49
USP28-204ENST00000537642 LRRC75BQ2VPJ9 315 aa12□□□□□ -0.49
USP28-204ENST00000537642 LDLRAD2Q5SZI1 272 aa12□□□□□ -0.49
USP28-204ENST00000537642 ASCL4Q6XD76 172 aa12□□□□□ -0.49
USP28-204ENST00000537642 Q6ZSV7 163 aa12□□□□□ -0.49
USP28-204ENST00000537642 STX19Q8N4C7 294 aa12□□□□□ -0.49
USP28-204ENST00000537642 OR13D1Q8NGV5 346 aa12□□□□□ -0.49
USP28-204ENST00000537642 WFDC12Q8WWY7 111 aa12□□□□□ -0.49
USP28-204ENST00000537642 CPNE2Q96FN4 548 aaPredicted RBP12□□□□□ -0.49
USP28-204ENST00000537642 UBE2J1Q9Y385 318 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms