RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 OR2AT4A6NND4 320 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 UPK1BO75841 260 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 OR2H2O95918 312 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 HAND1O96004 215 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 F12P00748 615 aaPredicted RBP13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 GYPAP02724 150 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 CHATP28329 748 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 GUCA2AQ02747 115 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 ZNF146Q15072 292 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 ZMYND11Q15326 602 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 ATAD3CQ5T2N8 411 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 AVPI1Q5T686 147 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 BPIFB2Q8N4F0 458 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 PHF21AQ96BD5 680 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 RAB3CQ96E17 227 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 SDHCQ99643 169 aaPredicted RBP13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 PECRQ9BY49 303 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 RHOFQ9HBH0 211 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 DIABLOQ9NR28 239 aa13.11□□□□□ -0.31
SFSWAP-206ENST00000537582 NBPF19A0A087WUL8 3843 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 POLQO75417 2590 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 ABCA12Q86UK0 2595 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 HECTD1Q9ULT8 2610 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 SPG11Q96JI7 2443 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 MEIOCA2RUB1 952 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 OOEPA6NGQ2 149 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 KNG1P01042 644 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 CHRM2P08172 466 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 SELLP14151 372 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 ZNF44P15621 663 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 HIST1H1DP16402 221 aaKnown RBP13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 EFNA4P52798 201 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 IL13RA2Q14627 380 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 CARTPTQ16568 116 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 ZNF260Q3ZCT1 412 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 CDNFQ49AH0 187 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 STUMQ69YW2 141 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 RAB12Q6IQ22 244 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 SULT4A1Q9BR01 284 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 FAAP24Q9BTP7 215 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 SRRQ9GZT4 340 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 AUNIPQ9H7T9 357 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 RASL12Q9NYN1 266 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 ZNF222Q9UK12 451 aa13.1□□□□□ -0.31
SFSWAP-206ENST00000537582 UBE2QL1A1L167 161 aa13.09□□□□□ -0.31
SFSWAP-206ENST00000537582 LGALS8O00214 317 aa13.09□□□□□ -0.31
SFSWAP-206ENST00000537582 MFNGO00587 321 aa13.09□□□□□ -0.31
SFSWAP-206ENST00000537582 DEGS1O15121 323 aa13.09□□□□□ -0.31
SFSWAP-206ENST00000537582 PSPNO60542 156 aa13.09□□□□□ -0.31
SFSWAP-206ENST00000537582 PDCD6O75340 191 aa13.09□□□□□ -0.31
SFSWAP-206ENST00000537582 PRDX2P32119 198 aa13.09□□□□□ -0.31
SFSWAP-206ENST00000537582 GABRA2P47869 451 aa13.09□□□□□ -0.31
SFSWAP-206ENST00000537582 COL10A1Q03692 680 aa13.09□□□□□ -0.31
SFSWAP-206ENST00000537582 SPIN3Q5JUX0 258 aa13.09□□□□□ -0.31
SFSWAP-206ENST00000537582 TEX36Q5VZQ5 186 aa13.09□□□□□ -0.31
SFSWAP-206ENST00000537582 Q6ZTK2 550 aa13.09□□□□□ -0.31
SFSWAP-206ENST00000537582 ZNF525Q8N782 197 aa13.09□□□□□ -0.31
SFSWAP-206ENST00000537582 ANGPTL6Q8NI99 470 aa13.09□□□□□ -0.31
SFSWAP-206ENST00000537582 PERPQ96FX8 193 aa13.09□□□□□ -0.31
SFSWAP-206ENST00000537582 HDHD3Q9BSH5 251 aaPredicted RBP13.09□□□□□ -0.31
SFSWAP-206ENST00000537582 RCC2Q9P258 522 aaKnown RBP13.09□□□□□ -0.31
SFSWAP-206ENST00000537582 PPIAL4EA0A075B759 164 aa13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 TMEM82A0PJX8 343 aa13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 MEIS3P1A6NDR6 274 aa13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 PPIAL4DF5H284 164 aa13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 SLC33A1O00400 549 aaPredicted RBP13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 SSX4O60224 188 aa13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 FCER2P06734 321 aa13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 HNRNPCP07910 306 aaKnown RBP eCLIP13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 PPIAL4FP0DN26 164 aa13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 DGCR2P98153 550 aa13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 MICBQ29980 383 aa13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 MPV17LQ2QL34 196 aa13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 PYDC2Q56P42 97 aa13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 LYPD2Q6UXB3 125 aa13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 C1orf87Q8N0U7 546 aa13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 FGFRL1Q8N441 504 aa13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 SUMF2Q8NBJ7 301 aa13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 NUDCD2Q8WVJ2 157 aa13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 NEDD4LQ96PU5 975 aa13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 CCL13Q99616 98 aa13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 CHST6Q9GZX3 395 aa13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 ZNF701Q9NV72 531 aaPredicted RBP13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 PLEKHJ1Q9NW61 149 aa13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 ING3Q9NXR8 418 aa13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 PPIAL4AQ9Y536 164 aa13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 APCP25054 2843 aa13.08□□□□□ -0.32
SFSWAP-206ENST00000537582 A0A0A6YYH2 397 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 A6NJ64 397 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 SH2D1BO14796 132 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 SSX5O60225 188 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 FUT3P21217 361 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 BTG1P62324 171 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 MRPS11P82912 194 aaKnown RBP13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 PYHIN1Q6K0P9 492 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 FIP1L1Q6UN15 594 aaKnown RBP13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 LYSMD2Q8IV50 215 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 FAM216BQ8N7L0 139 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 ST8SIA4Q92187 359 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 PPA2Q9H2U2 334 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms