RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 FUOMA2VDF0 154 aa13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 A6NDX4 124 aa13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 OR4C45A6NMZ5 311 aa13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 H3BUI4 141 aa13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 SIRPB1O00241 398 aa13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 F2RL2O00254 374 aa13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 MPZL2O60487 215 aa13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 MT-ND2P03891 347 aa13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 RPSAP08865 295 aaKnown RBP13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 ERP29P30040 261 aaKnown RBP13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 OR3A1P47881 315 aa13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 DYNLT3P51808 116 aa13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 P2RX3P56373 397 aa13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 SLC34A1Q06495 639 aa13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 ALKBH1Q13686 389 aaKnown RBP13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 GALEQ14376 348 aa13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 LDLRAD2Q5SZI1 272 aa13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 CCBE1Q6UXH8 406 aaPredicted RBP13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 TMEM219Q86XT9 240 aa13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 OR51A4Q8NGJ6 313 aa13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 OR13C9Q8NGT0 318 aa13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 OR10AC1Q8NH08 325 aa13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 Q96MT0 163 aa13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 CLEC7AQ9BXN2 247 aa13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 TMEM133Q9H2Q1 129 aa13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 ZNF702PQ9H963 129 aa13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 HILPDAQ9Y5L2 63 aa13.06□□□□□ -0.32
CLSTN3-204ENST00000535313 TRGV10A0A0A0MS01 117 aa13.05□□□□□ -0.32
CLSTN3-204ENST00000535313 E9PQ18 207 aa13.05□□□□□ -0.32
CLSTN3-204ENST00000535313 PEX14O75381 377 aa13.05□□□□□ -0.32
CLSTN3-204ENST00000535313 KDM4BO94953 1096 aa13.05□□□□□ -0.32
CLSTN3-204ENST00000535313 FADS2O95864 444 aaKnown RBP13.05□□□□□ -0.32
CLSTN3-204ENST00000535313 OR2H2O95918 312 aa13.05□□□□□ -0.32
CLSTN3-204ENST00000535313 ARSJQ5FYB0 599 aaPredicted RBP13.05□□□□□ -0.32
CLSTN3-204ENST00000535313 LHFPL3Q86UP9 236 aa13.05□□□□□ -0.32
CLSTN3-204ENST00000535313 C1QL4Q86Z23 238 aa13.05□□□□□ -0.32
CLSTN3-204ENST00000535313 Q8N2B8 174 aa13.05□□□□□ -0.32
CLSTN3-204ENST00000535313 SYS1Q8N2H4 156 aa13.05□□□□□ -0.32
CLSTN3-204ENST00000535313 OR5D18Q8NGL1 313 aa13.05□□□□□ -0.32
CLSTN3-204ENST00000535313 SPACA5Q96QH8 159 aa13.05□□□□□ -0.32
CLSTN3-204ENST00000535313 C9orf16Q9BUW7 83 aa13.05□□□□□ -0.32
CLSTN3-204ENST00000535313 PRSS22Q9GZN4 317 aa13.05□□□□□ -0.32
CLSTN3-204ENST00000535313 GAL3ST2Q9H3Q3 398 aa13.05□□□□□ -0.32
CLSTN3-204ENST00000535313 ZCCHC4Q9H5U6 513 aa13.05□□□□□ -0.32
CLSTN3-204ENST00000535313 RHOFQ9HBH0 211 aa13.05□□□□□ -0.32
CLSTN3-204ENST00000535313 AASSQ9UDR5 926 aa13.05□□□□□ -0.32
CLSTN3-204ENST00000535313 IGKV1-12A0A0C4DH73 117 aa13.04□□□□□ -0.32
CLSTN3-204ENST00000535313 MEGF11A6BM72 1044 aa13.04□□□□□ -0.32
CLSTN3-204ENST00000535313 IGKV1D-12P01611 117 aa13.04□□□□□ -0.32
CLSTN3-204ENST00000535313 HCKP08631 526 aa13.04□□□□□ -0.32
CLSTN3-204ENST00000535313 DBTP11182 482 aaKnown RBP13.04□□□□□ -0.32
CLSTN3-204ENST00000535313 ZNF44P15621 663 aa13.04□□□□□ -0.32
CLSTN3-204ENST00000535313 GABRB1P18505 474 aa13.04□□□□□ -0.32
CLSTN3-204ENST00000535313 HTR1DP28221 377 aa13.04□□□□□ -0.32
CLSTN3-204ENST00000535313 SCN1BQ07699 218 aa13.04□□□□□ -0.32
CLSTN3-204ENST00000535313 MRPL28Q13084 256 aaKnown RBP13.04□□□□□ -0.32
CLSTN3-204ENST00000535313 IL18R1Q13478 541 aa13.04□□□□□ -0.32
CLSTN3-204ENST00000535313 HABP2Q14520 560 aaPredicted RBP13.04□□□□□ -0.32
CLSTN3-204ENST00000535313 OR52W1Q6IF63 320 aa13.04□□□□□ -0.32
CLSTN3-204ENST00000535313 SAXO1Q8IYX7 474 aa13.04□□□□□ -0.32
CLSTN3-204ENST00000535313 OR5D14Q8NGL3 314 aa13.04□□□□□ -0.32
CLSTN3-204ENST00000535313 COMMD4Q9H0A8 199 aa13.04□□□□□ -0.32
CLSTN3-204ENST00000535313 INPP5EQ9NRR6 644 aa13.04□□□□□ -0.32
CLSTN3-204ENST00000535313 PRKDCP78527 4128 aaKnown RBP13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 TMEM212A6NML5 194 aa13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 FBXO24O75426 580 aa13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 OPN1MWP04001 364 aa13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 ALDOBP05062 364 aa13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 CCDC159P0C7I6 412 aa13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 OPN1MW2P0DN77 364 aa13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 OPN1MW3P0DN78 364 aa13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 TMEM225BP0DP42 221 aa13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 LMO1P25800 156 aa13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 RAB40BQ12829 278 aa13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 PRAMEF5Q5TYX0 476 aa13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 HIST2H2BDQ6DRA6 164 aa13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 RTN4RL2Q86UN3 420 aa13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 SERPINA12Q8IW75 414 aa13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 ABHD12Q8N2K0 398 aa13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 CHST4Q8NCG5 386 aa13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 OR5AK2Q8NH90 309 aa13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 RHOXF1Q8NHV9 184 aa13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 ZNF596Q8TC21 504 aa13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 ISG20L2Q9H9L3 353 aaKnown RBP13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 AMBNQ9NP70 447 aa13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 SERTAD4Q9NUC0 356 aa13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 TAS2R3Q9NYW6 316 aa13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 MYRFQ9Y2G1 1151 aa13.03□□□□□ -0.32
CLSTN3-204ENST00000535313 A0A0G2JK05 382 aa13.02□□□□□ -0.33
CLSTN3-204ENST00000535313 DEGS1O15121 323 aa13.02□□□□□ -0.33
CLSTN3-204ENST00000535313 SULT1B1O43704 296 aa13.02□□□□□ -0.33
CLSTN3-204ENST00000535313 MMP23AO75900 390 aa13.02□□□□□ -0.33
CLSTN3-204ENST00000535313 ALX3O95076 343 aa13.02□□□□□ -0.33
CLSTN3-204ENST00000535313 ZFPL1O95159 310 aa13.02□□□□□ -0.33
CLSTN3-204ENST00000535313 JUNBP17275 347 aaPredicted RBP13.02□□□□□ -0.33
CLSTN3-204ENST00000535313 CDK2P24941 298 aa13.02□□□□□ -0.33
CLSTN3-204ENST00000535313 ARHGDIBP52566 201 aa13.02□□□□□ -0.33
CLSTN3-204ENST00000535313 GBX2P52951 348 aaPredicted RBP13.02□□□□□ -0.33
CLSTN3-204ENST00000535313 AESQ08117 197 aa13.02□□□□□ -0.33
CLSTN3-204ENST00000535313 KISS1Q15726 138 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms