RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 RCN3Q96D15 328 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 DTNBP1Q96EV8 351 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 SMIM8Q96KF7 97 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 SPACA5Q96QH8 159 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 TM6SF2Q9BZW4 377 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 ROPN1BQ9BZX4 212 aaPredicted RBP-0.47□□□□□ -2.48
COPB1-212ENST00000534771 CHST5Q9GZS9 411 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 UBQLN4Q9NRR5 601 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 TXNL4BQ9NX01 149 aaKnown RBP-0.47□□□□□ -2.48
COPB1-212ENST00000534771 PSMC3IPQ9P2W1 217 aaPredicted RBP-0.47□□□□□ -2.48
COPB1-212ENST00000534771 PRO0628Q9UI54 55 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 NOL7Q9UMY1 257 aaKnown RBP-0.47□□□□□ -2.48
COPB1-212ENST00000534771 AP3M1Q9Y2T2 418 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 INSIG2Q9Y5U4 225 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 PTPRJQ12913 1337 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 UBN2Q6ZU65 1347 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 COL1A1P02452 1464 aaPredicted RBP-0.48□□□□□ -2.49
COPB1-212ENST00000534771 DIDO1Q9BTC0 2240 aaKnown RBP-0.48□□□□□ -2.49
COPB1-212ENST00000534771 AK9Q5TCS8 1911 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 TRPM6Q9BX84 2022 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 A0A1W2PPM0 123 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 ANGPT2O15123 496 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 SLC37A4O43826 429 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 IFNB1P01574 187 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 IGKV5-2P06315 115 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 CRYGDP07320 174 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 RHOCP08134 193 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 S100A2P29034 98 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 LPAR6P43657 344 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 SERPINB8P50452 374 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 IDH3GP51553 393 aaPredicted RBP-0.48□□□□□ -2.49
COPB1-212ENST00000534771 AIF1P55008 147 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 ACTR1AP61163 376 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 RUNX1Q01196 453 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 GUSBP1Q15486 140 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 CLLU1OSQ5K130 101 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 C1QTNF12Q5T7M4 302 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 TMEM42Q69YG0 159 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 CENPPQ6IPU0 288 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 SPINK6Q6UWN8 80 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 LCA10Q71F78 164 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 RUFY3Q7L099 469 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 SLC30A8Q8IWU4 369 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 VKORC1L1Q8N0U8 176 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 Q8N2B8 174 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 BBOF1Q8ND07 529 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 UBA3Q8TBC4 463 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 FAM131CQ96AQ9 280 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 TUBGCP3Q96CW5 907 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 CMBLQ96DG6 245 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 ZNF471Q9BX82 626 aaPredicted RBP-0.48□□□□□ -2.49
COPB1-212ENST00000534771 POTEKPQ9BYX7 375 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 ZYG11BQ9C0D3 744 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 CST9LQ9H4G1 147 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 BEX1Q9HBH7 125 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 KCNIP2Q9NS61 270 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 CLN6Q9NWW5 311 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 TMCC3Q9ULS5 477 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 CLEC4AQ9UMR7 237 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 C14orf166Q9Y224 244 aaKnown RBP-0.48□□□□□ -2.49
COPB1-212ENST00000534771 SNURFQ9Y675 71 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 WDR19Q8NEZ3 1342 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 PDZD2O15018 2839 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 GRIN2BQ13224 1484 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 ZNF462Q96JM2 2506 aa-0.48□□□□□ -2.49
COPB1-212ENST00000534771 LRP2P98164 4655 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 TMSB15BA0A087X1C1 80 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 FAM240BA0A1B0GVZ2 78 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 C2orf74A8MZ97 194 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 OR2J3O76001 311 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 CD160O95971 181 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 SOD1P00441 154 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 RPSAP08865 295 aaKnown RBP-0.49□□□□□ -2.49
COPB1-212ENST00000534771 CLTAP09496 248 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 SCGB1C2P0DMR2 95 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 RRM2P31350 389 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 RFC3P40938 356 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 ELP6Q0PNE2 266 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 LAMTOR4Q0VGL1 99 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 SELENBP1Q13228 472 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 PMVKQ15126 192 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 MMDQ15546 238 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 ATP6AP1LQ52LC2 224 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 UBE2NLQ5JXB2 153 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 ATAD3BQ5T9A4 648 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 GLYATQ6IB77 296 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 SLC8B1Q6J4K2 584 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 PMF1Q6P1K2 205 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 SPESP1Q6UW49 350 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 GLT6D1Q7Z4J2 308 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 LINC00337Q8N6G1 96 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 CYB561A3Q8NBI2 242 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 OR2M3Q8NG83 312 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 OR4K2Q8NGD2 314 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 OR4A4PQ8NGN8 299 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 OR8J1Q8NGP2 316 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 OR9G4Q8NGQ1 327 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 SCGB1C1Q8TD33 95 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 CD200R1Q8TD46 325 aa-0.49□□□□□ -2.49
COPB1-212ENST00000534771 C16orf78Q8WTQ4 265 aa-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms