RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	CCL17	Q92583	94 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	NEURL3	Q96EH8	262 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	RNF145	Q96MT1	663 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	TSNARE1	Q96NA8	513 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	BIRC8	Q96P09	236 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	KIR2DL4	Q99706	377 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	KLHDC3	Q9BQ90	382 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442		Q9H3A6	140 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	NANOG	Q9H9S0	305 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	RPS10P5	Q9NQ39	176 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	NMRK1	Q9NWW6	199 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	NOSIP	Q9Y314	301 aa	Known RBP	3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	CACNG2	Q9Y698	323 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	USH2A	O75445	5202 aa		3.14	□□□□□ -1.91
ECHDC1-223	ENST00000534442	IGHV1OR15-1	A0A075B7D0	117 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	IGLV3-32	A0A0A0MS00	114 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	IGHV3-15	A0A0B4J1V0	119 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	IGHV2OR16-5	A0A0B4J2B6	119 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	IGHV1-69D	A0A0B4J2H0	117 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442		A0A0G2JRQ6	117 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442		A0A1W2PPE3	182 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	ZNF716	A6NP11	495 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442		E5RI56	91 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442		K7N7A8	449 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	PHOX2A	O14813	284 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	SYNGR1	O43759	233 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	MRPL33	O75394	65 aa	Known RBP	3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	SCEL	O95171	688 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	IGHV1-69	P01742	117 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	IGHV3-23	P01764	117 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	OR8U8	P0C7N1	319 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	CCDC172	P0C7W6	258 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	ZNF735	P0CB33	412 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	ETS2	P15036	469 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	AQP1	P29972	269 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	BID	P55957	195 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	UBE2N	P61088	152 aa	Known RBP	3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	CDK16	Q00536	496 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	ZNF45	Q02386	682 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	ACVR1	Q04771	509 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	LY6E	Q16553	131 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	LGALS9B	Q3B8N2	356 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	TMEM155	Q4W5P6	130 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	HIKESHI	Q53FT3	197 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	C6orf226	Q5I0X4	101 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	PAGE2B	Q5JRK9	111 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	SLC25A30	Q5SVS4	291 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	OR2G6	Q5TZ20	316 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	DUPD1	Q68J44	220 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	TMIGD1	Q6UXZ0	262 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	ACOT7L	Q6ZUV0	252 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	CD177	Q8N6Q3	437 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	OR52E4	Q8NGH9	312 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	OR52H1	Q8NGJ2	320 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	TPD52L3	Q96J77	140 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	ZNF317	Q96PQ6	595 aa	Predicted RBP	3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	RNF2	Q99496	336 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	ZNF184	Q99676	751 aa	Predicted RBP	3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	GPR21	Q99679	349 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	CHRDL1	Q9BU40	450 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	ZNF717	Q9BY31	904 aa	Predicted RBP	3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	PARVB	Q9HBI1	364 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	NOX3	Q9HBY0	568 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	ABCD2	Q9UBJ2	740 aa		3.13	□□□□□ -1.91
ECHDC1-223	ENST00000534442	IGKV1D-8	A0A087WSZ0	117 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	ARPC4-TTLL3	A0A0A6YYG9	625 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	FAM168B	A1KXE4	195 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	DCTN6	O00399	190 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	GPR171	O14626	319 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	PFDN6	O15212	129 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	FADS1	O60427	444 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	LYPLA1	O75608	230 aa	Predicted RBP	3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	IGKV3-15	P01624	115 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	SEMG1	P04279	462 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	GAPDH	P04406	335 aa	Known RBP	3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	C8G	P07360	202 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	FBP1	P09467	338 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442		P0C879	139 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	GZMA	P12544	262 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	ELK4	P28324	431 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	GLRX	P35754	106 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	DDOST	P39656	456 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	EIF1	P41567	113 aa	Known RBP	3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	RPS23	P62266	143 aa	Known RBP	3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	ZNF763	Q0D2J5	394 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	GK3P	Q14409	553 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	KIAA0040	Q15053	153 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	DUSP7	Q16829	419 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	TMEM176B	Q3YBM2	270 aa	Predicted RBP	3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	FAM27D1	Q5T7N8	215 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	PRAMEF5	Q5TYX0	476 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	PRAMEF6	Q5VXH4	476 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	LRP11	Q86VZ4	500 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	NRM	Q8IXM6	262 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	OR9K2	Q8NGE7	335 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	ST8SIA1	Q92185	356 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	PGLYRP4	Q96LB8	373 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	OXGR1	Q96P68	337 aa		3.12	□□□□□ -1.91
ECHDC1-223	ENST00000534442	QKI	Q96PU8	341 aa	Known RBP eCLIP	3.12	□□□□□ -1.91	3e-7	■■■■■ 26.9
ECHDC1-223	ENST00000534442	P2RX4	Q99571	388 aa		3.12	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms