RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 OR10J1P30954 320 aa16.74■□□□□ 0.27
SMPD1-210ENST00000534405 NOVA1P51513 510 aaKnown RBP16.74■□□□□ 0.27
SMPD1-210ENST00000534405 IDH3GP51553 393 aaPredicted RBP16.74■□□□□ 0.27
SMPD1-210ENST00000534405 ELLP55199 621 aaPredicted RBP16.74■□□□□ 0.27
SMPD1-210ENST00000534405 NXPH1P58417 271 aa16.74■□□□□ 0.27
SMPD1-210ENST00000534405 SELENOTP62341 195 aa16.74■□□□□ 0.27
SMPD1-210ENST00000534405 GPR157Q5UAW9 335 aa16.74■□□□□ 0.27
SMPD1-210ENST00000534405 PLXDC2Q6UX71 529 aa16.74■□□□□ 0.27
SMPD1-210ENST00000534405 NUFIP2Q7Z417 695 aaKnown RBP16.74■□□□□ 0.27
SMPD1-210ENST00000534405 GRINAQ7Z429 371 aa16.74■□□□□ 0.27
SMPD1-210ENST00000534405 CATSPERDQ86XM0 798 aa16.74■□□□□ 0.27
SMPD1-210ENST00000534405 OR5L2Q8NGL0 311 aa16.74■□□□□ 0.27
SMPD1-210ENST00000534405 OR10G4Q8NGN3 311 aa16.74■□□□□ 0.27
SMPD1-210ENST00000534405 FNDC9Q8TBE3 224 aa16.74■□□□□ 0.27
SMPD1-210ENST00000534405 EXTL1Q92935 676 aa16.74■□□□□ 0.27
SMPD1-210ENST00000534405 CABIN1Q9Y6J0 2220 aa16.74■□□□□ 0.27
SMPD1-210ENST00000534405 A0A1W2PN81 502 aa16.74■□□□□ 0.27
SMPD1-210ENST00000534405 B4E171 279 aa16.74■□□□□ 0.27
SMPD1-210ENST00000534405 CHRNA7P36544 502 aa16.74■□□□□ 0.27
SMPD1-210ENST00000534405 FMODQ06828 376 aa16.74■□□□□ 0.27
SMPD1-210ENST00000534405 SPOCK1Q08629 439 aa16.74■□□□□ 0.27
SMPD1-210ENST00000534405 CHRFAM7AQ494W8 412 aa16.74■□□□□ 0.27
SMPD1-210ENST00000534405 NKAIN1Q4KMZ8 207 aa16.74■□□□□ 0.27
SMPD1-210ENST00000534405 D2HGDHQ8N465 521 aa16.74■□□□□ 0.27
SMPD1-210ENST00000534405 C11orf42Q8N5U0 333 aa16.74■□□□□ 0.27
SMPD1-210ENST00000534405 MIEN1Q9BRT3 115 aa16.74■□□□□ 0.27
SMPD1-210ENST00000534405 YLPM1P49750 1951 aaKnown RBP16.73■□□□□ 0.27
SMPD1-210ENST00000534405 SRSF10O75494 262 aaKnown RBP16.73■□□□□ 0.27
SMPD1-210ENST00000534405 SCGB1D1O95968 90 aa16.73■□□□□ 0.27
SMPD1-210ENST00000534405 IGHMP01871 453 aa16.73■□□□□ 0.27
SMPD1-210ENST00000534405 LCATP04180 440 aa16.73■□□□□ 0.27
SMPD1-210ENST00000534405 UNC119Q13432 240 aa16.73■□□□□ 0.27
SMPD1-210ENST00000534405 SQSTM1Q13501 440 aa16.73■□□□□ 0.27
SMPD1-210ENST00000534405 P2RY6Q15077 328 aa16.73■□□□□ 0.27
SMPD1-210ENST00000534405 TMEM176BQ3YBM2 270 aaPredicted RBP16.73■□□□□ 0.27
SMPD1-210ENST00000534405 COL5A1-AS1Q5SY13 56 aa16.73■□□□□ 0.27
SMPD1-210ENST00000534405 TMEM238LA0A1B0GVL6 79 aa16.72■□□□□ 0.27
SMPD1-210ENST00000534405 SOX1O00570 391 aaPredicted RBP16.72■□□□□ 0.27
SMPD1-210ENST00000534405 PIAS2O75928 621 aa16.72■□□□□ 0.27
SMPD1-210ENST00000534405 TAF9Q16594 264 aa16.72■□□□□ 0.27
SMPD1-210ENST00000534405 OR52N5Q8NH56 324 aa16.72■□□□□ 0.27
SMPD1-210ENST00000534405 C20orf144Q9BQM9 153 aa16.72■□□□□ 0.27
SMPD1-210ENST00000534405 NAGKQ9UJ70 344 aa16.72■□□□□ 0.27
SMPD1-210ENST00000534405 IGKV1D-43A0A0B4J1Z2 117 aa16.72■□□□□ 0.27
SMPD1-210ENST00000534405 LOC101059948A0A1B0GTJ6 334 aa16.72■□□□□ 0.27
SMPD1-210ENST00000534405 NKX6-3A6NJ46 265 aa16.72■□□□□ 0.27
SMPD1-210ENST00000534405 LMX1BO60663 402 aa16.72■□□□□ 0.27
SMPD1-210ENST00000534405 AHSA1O95433 338 aa16.72■□□□□ 0.27
SMPD1-210ENST00000534405 UMODP07911 640 aa16.72■□□□□ 0.27
SMPD1-210ENST00000534405 GLRA1P23415 457 aa16.72■□□□□ 0.27
SMPD1-210ENST00000534405 TNFSF10P50591 281 aa16.72■□□□□ 0.27
SMPD1-210ENST00000534405 KCTD18Q6PI47 426 aaPredicted RBP16.72■□□□□ 0.27
SMPD1-210ENST00000534405 CLEC2AQ6UVW9 174 aa16.72■□□□□ 0.27
SMPD1-210ENST00000534405 OR2I1PQ8NGU4 316 aa16.72■□□□□ 0.27
SMPD1-210ENST00000534405 PYGO2Q9BRQ0 406 aa16.72■□□□□ 0.27
SMPD1-210ENST00000534405 ZNF576Q9H609 170 aa16.72■□□□□ 0.27
SMPD1-210ENST00000534405 SERINC1Q9NRX5 453 aa16.72■□□□□ 0.27
SMPD1-210ENST00000534405 EMC9Q9Y3B6 208 aa16.72■□□□□ 0.27
SMPD1-210ENST00000534405 A0A1B0GX78 115 aa16.71■□□□□ 0.27
SMPD1-210ENST00000534405 MS4A18H0YCH9 400 aa16.71■□□□□ 0.27
SMPD1-210ENST00000534405 QRFPP83859 136 aa16.71■□□□□ 0.27
SMPD1-210ENST00000534405 TMEM241Q24JQ0 296 aa16.71■□□□□ 0.27
SMPD1-210ENST00000534405 MS4A18Q3C1V0 323 aa16.71■□□□□ 0.27
SMPD1-210ENST00000534405 LINC00346Q8IVM7 164 aa16.71■□□□□ 0.27
SMPD1-210ENST00000534405 AGBL5Q8NDL9 886 aa16.71■□□□□ 0.27
SMPD1-210ENST00000534405 OR13G1Q8NGZ3 307 aa16.71■□□□□ 0.27
SMPD1-210ENST00000534405 RCL1Q9Y2P8 373 aaKnown RBP16.71■□□□□ 0.27
SMPD1-210ENST00000534405 SRFP11831 508 aa16.71■□□□□ 0.27
SMPD1-210ENST00000534405 ALDH3B1P43353 468 aa16.71■□□□□ 0.27
SMPD1-210ENST00000534405 RAB7AP51149 207 aa16.71■□□□□ 0.27
SMPD1-210ENST00000534405 LCN10Q6JVE6 187 aa16.71■□□□□ 0.27
SMPD1-210ENST00000534405 ZNF100Q8IYN0 542 aa16.71■□□□□ 0.27
SMPD1-210ENST00000534405 GBGT1Q8N5D6 347 aa16.71■□□□□ 0.27
SMPD1-210ENST00000534405 SLC24A4Q8NFF2 622 aa16.71■□□□□ 0.27
SMPD1-210ENST00000534405 THAP3Q8WTV1 239 aaPredicted RBP16.71■□□□□ 0.27
SMPD1-210ENST00000534405 WFIKKN1Q96NZ8 548 aa16.71■□□□□ 0.27
SMPD1-210ENST00000534405 CTDSP1Q9GZU7 261 aa16.71■□□□□ 0.27
SMPD1-210ENST00000534405 P4HTMQ9NXG6 502 aa16.71■□□□□ 0.27
SMPD1-210ENST00000534405 C20orf202A1L168 122 aa16.7■□□□□ 0.26
SMPD1-210ENST00000534405 RBMXP38159 391 aaKnown RBP16.7■□□□□ 0.26
SMPD1-210ENST00000534405 KLF3P57682 345 aaPredicted RBP16.7■□□□□ 0.26
SMPD1-210ENST00000534405 FBXW4P57775 412 aa16.7■□□□□ 0.26
SMPD1-210ENST00000534405 ZNF880Q6PDB4 577 aa16.7■□□□□ 0.26
SMPD1-210ENST00000534405 COX15Q7KZN9 410 aa16.7■□□□□ 0.26
SMPD1-210ENST00000534405 PLXDC1Q8IUK5 500 aa16.7■□□□□ 0.26
SMPD1-210ENST00000534405 MAML2Q8IZL2 1156 aaPredicted RBP16.7■□□□□ 0.26
SMPD1-210ENST00000534405 TMEM170AQ8WVE7 144 aa16.7■□□□□ 0.26
SMPD1-210ENST00000534405 EMG1Q92979 244 aaKnown RBP16.7■□□□□ 0.26
SMPD1-210ENST00000534405 ZNF501Q96CX3 271 aaPredicted RBP16.7■□□□□ 0.26
SMPD1-210ENST00000534405 G6PC2Q9NQR9 355 aa16.7■□□□□ 0.26
SMPD1-210ENST00000534405 AURKAIP1Q9NWT8 199 aaPredicted RBP16.7■□□□□ 0.26
SMPD1-210ENST00000534405 MBPP02686 304 aaPredicted RBP16.7■□□□□ 0.26
SMPD1-210ENST00000534405 DNASE1L1P49184 302 aa16.7■□□□□ 0.26
SMPD1-210ENST00000534405 TGIF2LYQ8IUE0 185 aa16.7■□□□□ 0.26
SMPD1-210ENST00000534405 CLDND2Q8NHS1 167 aa16.7■□□□□ 0.26
SMPD1-210ENST00000534405 MRGPRDQ8TDS7 321 aa16.7■□□□□ 0.26
SMPD1-210ENST00000534405 FGF21Q9NSA1 209 aa16.7■□□□□ 0.26
SMPD1-210ENST00000534405 HSF4Q9ULV5 492 aa16.7■□□□□ 0.26
SMPD1-210ENST00000534405 TRBV11-1A0A0K0K1C0 115 aa16.69■□□□□ 0.26
SMPD1-210ENST00000534405 ATXN7O15265 892 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms