RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 OR52M1Q8NGK5 317 aa16.81■□□□□ 0.28
CAPN1-226ENST00000533820 THOC3Q96J01 351 aaKnown RBP16.81■□□□□ 0.28
CAPN1-226ENST00000533820 IGKV1-27A0A075B6S5 117 aa16.81■□□□□ 0.28
CAPN1-226ENST00000533820 TAAR5O14804 337 aa16.81■□□□□ 0.28
CAPN1-226ENST00000533820 JTBO76095 146 aa16.81■□□□□ 0.28
CAPN1-226ENST00000533820 ZNF728P0DKX0 622 aa16.81■□□□□ 0.28
CAPN1-226ENST00000533820 SPINK2P20155 84 aa16.81■□□□□ 0.28
CAPN1-226ENST00000533820 KMT5CQ86Y97 462 aa16.81■□□□□ 0.28
CAPN1-226ENST00000533820 CD300LFQ8TDQ1 290 aa16.81■□□□□ 0.28
CAPN1-226ENST00000533820 RHBDD1Q8TEB9 315 aa16.81■□□□□ 0.28
CAPN1-226ENST00000533820 HDGFL3Q9Y3E1 203 aa16.81■□□□□ 0.28
CAPN1-226ENST00000533820 MTCH2Q9Y6C9 303 aa16.81■□□□□ 0.28
CAPN1-226ENST00000533820 AHCTF1Q8WYP5 2266 aa16.81■□□□□ 0.28
CAPN1-226ENST00000533820 CRYM-AS1A6NIL9 109 aa16.81■□□□□ 0.28
CAPN1-226ENST00000533820 NPSP0C0P6 89 aa16.81■□□□□ 0.28
CAPN1-226ENST00000533820 CDX1P47902 265 aaPredicted RBP16.81■□□□□ 0.28
CAPN1-226ENST00000533820 CAMLGP49069 296 aa16.81■□□□□ 0.28
CAPN1-226ENST00000533820 DVL1P1P54792 670 aaPredicted RBP16.81■□□□□ 0.28
CAPN1-226ENST00000533820 ETFRF1Q6IPR1 90 aa16.81■□□□□ 0.28
CAPN1-226ENST00000533820 SLC22A25Q6T423 547 aa16.81■□□□□ 0.28
CAPN1-226ENST00000533820 Q96M66 194 aa16.81■□□□□ 0.28
CAPN1-226ENST00000533820 TRIOBPQ9H2D6 2365 aa16.8■□□□□ 0.28
CAPN1-226ENST00000533820 PRRC2CQ9Y520 2896 aaKnown RBP16.8■□□□□ 0.28
CAPN1-226ENST00000533820 CEBPGP53567 150 aa16.8■□□□□ 0.28
CAPN1-226ENST00000533820 AWAT1Q58HT5 328 aa16.8■□□□□ 0.28
CAPN1-226ENST00000533820 PLXDC2Q6UX71 529 aa16.8■□□□□ 0.28
CAPN1-226ENST00000533820 PP6455Q8WZ26 134 aa16.8■□□□□ 0.28
CAPN1-226ENST00000533820 NABP1Q96AH0 204 aa16.8■□□□□ 0.28
CAPN1-226ENST00000533820 ALKBH3Q96Q83 286 aaPredicted RBP16.8■□□□□ 0.28
CAPN1-226ENST00000533820 PARPBPQ9NWS1 579 aa16.8■□□□□ 0.28
CAPN1-226ENST00000533820 SEMA5BQ9P283 1151 aa16.8■□□□□ 0.28
CAPN1-226ENST00000533820 NXPH3O95157 252 aa16.8■□□□□ 0.28
CAPN1-226ENST00000533820 OMGP23515 440 aa16.8■□□□□ 0.28
CAPN1-226ENST00000533820 RPS10P46783 165 aaKnown RBP16.8■□□□□ 0.28
CAPN1-226ENST00000533820 KCNMB1Q16558 191 aa16.8■□□□□ 0.28
CAPN1-226ENST00000533820 NSUN5P2Q63ZY6 315 aa16.8■□□□□ 0.28
CAPN1-226ENST00000533820 FBXL14Q8N1E6 418 aa16.8■□□□□ 0.28
CAPN1-226ENST00000533820 GPR61Q9BZJ8 451 aa16.8■□□□□ 0.28
CAPN1-226ENST00000533820 RGCCQ9H4X1 137 aa16.8■□□□□ 0.28
CAPN1-226ENST00000533820 BCO1Q9HAY6 547 aa16.8■□□□□ 0.28
CAPN1-226ENST00000533820 CACFD1Q9UGQ2 172 aa16.8■□□□□ 0.28
CAPN1-226ENST00000533820 KCNIP3Q9Y2W7 256 aa16.8■□□□□ 0.28
CAPN1-226ENST00000533820 GOLT1BQ9Y3E0 138 aa16.8■□□□□ 0.28
CAPN1-226ENST00000533820 CTSDP07339 412 aaPredicted RBP16.79■□□□□ 0.28
CAPN1-226ENST00000533820 OR13C7P0DN81 318 aa16.79■□□□□ 0.28
CAPN1-226ENST00000533820 B4GALT1P15291 398 aa16.79■□□□□ 0.28
CAPN1-226ENST00000533820 CCDC74BQ96LY2 380 aa16.79■□□□□ 0.28
CAPN1-226ENST00000533820 PARP11Q9NR21 331 aa16.79■□□□□ 0.28
CAPN1-226ENST00000533820 V9GYS6 101 aa16.79■□□□□ 0.28
CAPN1-226ENST00000533820 IGHV5-10-1A0A0J9YXX1 117 aa16.79■□□□□ 0.28
CAPN1-226ENST00000533820 TMEM156Q8N614 296 aa16.79■□□□□ 0.28
CAPN1-226ENST00000533820 ADPRHL1Q8NDY3 354 aa16.79■□□□□ 0.28
CAPN1-226ENST00000533820 SLC25A43Q8WUT9 341 aaPredicted RBP16.79■□□□□ 0.28
CAPN1-226ENST00000533820 TM2D1Q9BX74 207 aa16.79■□□□□ 0.28
CAPN1-226ENST00000533820 WNT16Q9UBV4 365 aa16.79■□□□□ 0.28
CAPN1-226ENST00000533820 CEP192Q8TEP8 1941 aa16.79■□□□□ 0.28
CAPN1-226ENST00000533820 CCDC187A0A096LP49 1063 aa16.78■□□□□ 0.28
CAPN1-226ENST00000533820 A0A1W2PPE2 198 aa16.78■□□□□ 0.28
CAPN1-226ENST00000533820 C7orf77A4D0Y5 90 aa16.78■□□□□ 0.28
CAPN1-226ENST00000533820 SHBQ15464 509 aa16.78■□□□□ 0.28
CAPN1-226ENST00000533820 DKKL1Q9UK85 242 aa16.78■□□□□ 0.28
CAPN1-226ENST00000533820 TP53I11O14683 189 aa16.78■□□□□ 0.28
CAPN1-226ENST00000533820 PHF1O43189 567 aaPredicted RBP16.78■□□□□ 0.28
CAPN1-226ENST00000533820 IFNA10P01566 189 aa16.78■□□□□ 0.28
CAPN1-226ENST00000533820 IGHV3-9P01782 118 aa16.78■□□□□ 0.28
CAPN1-226ENST00000533820 FOXO1Q12778 655 aa16.78■□□□□ 0.28
CAPN1-226ENST00000533820 GUK1Q16774 197 aa16.78■□□□□ 0.28
CAPN1-226ENST00000533820 LBHQ53QV2 105 aaPredicted RBP16.78■□□□□ 0.28
CAPN1-226ENST00000533820 RNF138Q8WVD3 245 aa16.78■□□□□ 0.28
CAPN1-226ENST00000533820 SPTSSAQ969W0 71 aa16.78■□□□□ 0.28
CAPN1-226ENST00000533820 DOK5Q9P104 306 aa16.78■□□□□ 0.28
CAPN1-226ENST00000533820 A0A0U1RQV5 110 aa16.78■□□□□ 0.28
CAPN1-226ENST00000533820 OPN5Q6U736 354 aa16.78■□□□□ 0.28
CAPN1-226ENST00000533820 FBXW12Q6X9E4 464 aa16.78■□□□□ 0.28
CAPN1-226ENST00000533820 SLC16A14Q7RTX9 510 aa16.78■□□□□ 0.28
CAPN1-226ENST00000533820 IGLV3-32A0A0A0MS00 114 aa16.77■□□□□ 0.28
CAPN1-226ENST00000533820 A0A0J9YW62 118 aa16.77■□□□□ 0.28
CAPN1-226ENST00000533820 FAM157AC9JC47 383 aa16.77■□□□□ 0.28
CAPN1-226ENST00000533820 F10P00742 488 aa16.77■□□□□ 0.28
CAPN1-226ENST00000533820 RAB4AP20338 218 aa16.77■□□□□ 0.28
CAPN1-226ENST00000533820 TMEM182Q6ZP80 229 aaPredicted RBP16.77■□□□□ 0.28
CAPN1-226ENST00000533820 BORCS8Q96FH0 119 aa16.77■□□□□ 0.28
CAPN1-226ENST00000533820 SLC2A9Q9NRM0 540 aa16.77■□□□□ 0.28
CAPN1-226ENST00000533820 YRDCQ86U90 279 aaKnown RBP16.77■□□□□ 0.27
CAPN1-226ENST00000533820 FADS6Q8N9I5 356 aa16.77■□□□□ 0.27
CAPN1-226ENST00000533820 FAM213BQ8TBF2 198 aa16.77■□□□□ 0.27
CAPN1-226ENST00000533820 NAA60Q9H7X0 242 aa16.77■□□□□ 0.27
CAPN1-226ENST00000533820 NECAP2Q9NVZ3 263 aa16.77■□□□□ 0.27
CAPN1-226ENST00000533820 P4HTMQ9NXG6 502 aa16.77■□□□□ 0.27
CAPN1-226ENST00000533820 FREM1Q5H8C1 2179 aa16.77■□□□□ 0.27
CAPN1-226ENST00000533820 IGKV1-12A0A0C4DH73 117 aa16.76■□□□□ 0.27
CAPN1-226ENST00000533820 IFNA17P01571 189 aa16.76■□□□□ 0.27
CAPN1-226ENST00000533820 IGKV1D-12P01611 117 aa16.76■□□□□ 0.27
CAPN1-226ENST00000533820 NTF4P34130 210 aa16.76■□□□□ 0.27
CAPN1-226ENST00000533820 H3F3AP84243 136 aa16.76■□□□□ 0.27
CAPN1-226ENST00000533820 OR10AD1Q8NGE0 317 aa16.76■□□□□ 0.27
CAPN1-226ENST00000533820 SRXN1Q9BYN0 137 aa16.76■□□□□ 0.27
CAPN1-226ENST00000533820 IL17BQ9UHF5 180 aa16.76■□□□□ 0.27
CAPN1-226ENST00000533820 MUC3AQ02505 3323 aa16.76■□□□□ 0.27
CAPN1-226ENST00000533820 IGLV3-1P01715 115 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms