RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 ATG12O94817 140 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 CDS2O95674 445 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 TK1P04183 234 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 IL32P24001 234 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 APLNRP35414 380 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 P2RY1P47900 373 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 MEOX1P50221 254 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 RRADP55042 308 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 SOX8P57073 446 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 RAB1AP62820 205 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 SRYQ05066 204 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 C10orf91Q5T1B1 145 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 ZNF573Q86YE8 665 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 CALHM1Q8IU99 346 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 COMMD1Q8N668 190 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 TMEM178AQ8NBL3 297 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 BPIFCQ8NFQ6 507 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 TMED6Q8WW62 240 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 EXTL1Q92935 676 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 LRRC46Q96FV0 321 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 POM121L2Q96KW2 1035 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 PKIBQ9C010 78 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 PARP11Q9NR21 331 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 GLRX2Q9NS18 164 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 CARHSP1Q9Y2V2 147 aaKnown RBP10.3□□□□□ -0.76
ATM-222ENST00000533733 VCANP13611 3396 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 BORCS7-ASMTA0A0B4J1R7 106 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 ANKRD30BLA7E2S9 258 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 ZNF705EA8MWA4 302 aaPredicted RBP10.3□□□□□ -0.76
ATM-222ENST00000533733 GPR137BO60478 399 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 NAPSAO96009 420 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 PPYP01298 95 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 OR5AC1P0C628 307 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 S100GP29377 79 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 TMEM268Q5VZI3 342 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 MRPL24Q96A35 216 aaKnown RBP10.3□□□□□ -0.76
ATM-222ENST00000533733 NKX6-2Q9C056 277 aaPredicted RBP10.3□□□□□ -0.76
ATM-222ENST00000533733 IFT22Q9H7X7 185 aa10.3□□□□□ -0.76
ATM-222ENST00000533733 ZNF629Q9UEG4 869 aaPredicted RBP10.3□□□□□ -0.76
ATM-222ENST00000533733 LRP5LA4QPB2 252 aa10.29□□□□□ -0.76
ATM-222ENST00000533733 FAM166BA8MTA8 275 aa10.29□□□□□ -0.76
ATM-222ENST00000533733 CDX4O14627 284 aaPredicted RBP10.29□□□□□ -0.76
ATM-222ENST00000533733 ST8SIA3O43173 380 aa10.29□□□□□ -0.76
ATM-222ENST00000533733 SEC11BP0C7V7 166 aa10.29□□□□□ -0.76
ATM-222ENST00000533733 HAAOP46952 286 aa10.29□□□□□ -0.76
ATM-222ENST00000533733 RAB5CP51148 216 aa10.29□□□□□ -0.76
ATM-222ENST00000533733 F2RL1P55085 397 aa10.29□□□□□ -0.76
ATM-222ENST00000533733 CLN3Q13286 438 aa10.29□□□□□ -0.76
ATM-222ENST00000533733 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.29□□□□□ -0.76
ATM-222ENST00000533733 MSI2Q96DH6 328 aaKnown RBP10.29□□□□□ -0.76
ATM-222ENST00000533733 NARS2Q96I59 477 aaKnown RBP10.29□□□□□ -0.76
ATM-222ENST00000533733 TSNAXQ99598 290 aaKnown RBP10.29□□□□□ -0.76
ATM-222ENST00000533733 SEC11CQ9BY50 192 aa10.29□□□□□ -0.76
ATM-222ENST00000533733 ARV1Q9H2C2 271 aa10.29□□□□□ -0.76
ATM-222ENST00000533733 LIME1Q9H400 295 aa10.29□□□□□ -0.76
ATM-222ENST00000533733 Q9N2K0 584 aa10.29□□□□□ -0.76
ATM-222ENST00000533733 TMEM9BQ9NQ34 198 aa10.29□□□□□ -0.76
ATM-222ENST00000533733 PRR13Q9NZ81 148 aa10.29□□□□□ -0.76
ATM-222ENST00000533733 COL6A3P12111 3177 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 CD300LBA8K4G0 201 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 TSPAN4O14817 238 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 LRP3O75074 770 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 F10P00742 488 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 IGHV3-9P01782 118 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 HLA-HP01893 362 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 CELA3AP09093 270 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 ZNF806P0C7X5 589 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 PVALBP20472 110 aaPredicted RBP10.28□□□□□ -0.76
ATM-222ENST00000533733 BCL3P20749 454 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 CAV2P51636 162 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 FXYD4P59646 89 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 GNG3P63215 75 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 DEFA5Q01523 94 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 IL24Q13007 206 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 MRPL49Q13405 166 aaKnown RBP10.28□□□□□ -0.76
ATM-222ENST00000533733 GNMTQ14749 295 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 ZNF169Q14929 603 aaPredicted RBP10.28□□□□□ -0.76
ATM-222ENST00000533733 FBXW12Q6X9E4 464 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 LINC00696Q6ZRV3 163 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 NUFIP2Q7Z417 695 aaKnown RBP10.28□□□□□ -0.76
ATM-222ENST00000533733 Q8IYB0 196 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 ZNF565Q8N9K5 539 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 OR1K1Q8NGR3 316 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 GLYATL2Q8WU03 294 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 HPSE2Q8WWQ2 592 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 IL22RA2Q969J5 263 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 MARS2Q96GW9 593 aaKnown RBP10.28□□□□□ -0.76
ATM-222ENST00000533733 TMEM56Q96MV1 263 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 MICU1Q9BPX6 476 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 OR2S2Q9NQN1 319 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 FAM212BQ9NTI7 297 aaPredicted RBP10.28□□□□□ -0.76
ATM-222ENST00000533733 FBXL17Q9UF56 701 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 LSM5Q9Y4Y9 91 aaKnown RBP10.28□□□□□ -0.76
ATM-222ENST00000533733 ATP23Q9Y6H3 246 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 TMEM56-RWDD3S4R434 201 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 ZDBF2Q9HCK1 2354 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 CNTRLQ7Z7A1 2325 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 FREM1Q5H8C1 2179 aa10.28□□□□□ -0.76
ATM-222ENST00000533733 A0A096LPE4 126 aa10.27□□□□□ -0.76
ATM-222ENST00000533733 C3orf85A0A1B0GTC6 90 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms