RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 GPER1Q99527 375 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 CITED1Q99966 193 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 MEGF9Q9H1U4 602 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 C16orf95Q9H693 158 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 HMG20AQ9NP66 347 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 ABCB10Q9NRK6 738 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 PCDHGB5Q9Y5G0 923 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 MGST3O14880 152 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 SULT1B1O43704 296 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 WBP4O75554 376 aaKnown RBP8.46□□□□□ -1.06
CAPN1-225ENST00000533704 TSPAN9O75954 239 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 CLPXO76031 633 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 KDM4BO94953 1096 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 OR2H2O95918 312 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 RBP4P02753 201 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 RPSAP08865 295 aaKnown RBP8.46□□□□□ -1.06
CAPN1-225ENST00000533704 LIMS3P0CW19 117 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 LIMS4P0CW20 117 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 P2RX3P56373 397 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 MRPL28Q13084 256 aaKnown RBP8.46□□□□□ -1.06
CAPN1-225ENST00000533704 IL18R1Q13478 541 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 ZNF146Q15072 292 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 SSX2Q16385 188 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 SPIN3Q5JUX0 258 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 PRAMEF5Q5TYX0 476 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 SERPINA12Q8IW75 414 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 OR5D14Q8NGL3 314 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 NDNFQ8TB73 568 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 CNIH3Q8TBE1 160 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 FOXRED1Q96CU9 486 aaPredicted RBP8.46□□□□□ -1.06
CAPN1-225ENST00000533704 NR1H4Q96RI1 486 aaPredicted RBP8.46□□□□□ -1.06
CAPN1-225ENST00000533704 ZNF649Q9BS31 505 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 FAM192AQ9GZU8 254 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 TBL2Q9Y4P3 447 aaKnown RBP8.46□□□□□ -1.06
CAPN1-225ENST00000533704 HILPDAQ9Y5L2 63 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 LINC00312Q9Y6C7 94 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 SESN1Q9Y6P5 492 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 NOTCH1P46531 2555 aa8.46□□□□□ -1.06
CAPN1-225ENST00000533704 TRGV10A0A0A0MS01 117 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 FAM172BPA6NC97 362 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 ODF3BA8MYP8 253 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 HSPB6O14558 160 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 DEGS1O15121 323 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 MAGEB3O15480 346 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 WIPF1O43516 503 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 CHST1O43916 411 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 MT-ND2P03891 347 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 RAB3AP20336 220 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 GLIPR1P48060 266 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 ETV1P50549 477 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 SLC34A1Q06495 639 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 AESQ08117 197 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 ATXN7L3Q14CW9 347 aaPredicted RBP8.45□□□□□ -1.06
CAPN1-225ENST00000533704 KISS1Q15726 138 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 AANATQ16613 207 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 OR2G6Q5TZ20 316 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 ZNF691Q5VV52 312 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 ZNF626Q68DY1 528 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 HIST2H2BDQ6DRA6 164 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 ASPHD2Q6ICH7 369 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 TMEM219Q86XT9 240 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 C11orf44Q8N8P7 122 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 OR51A2Q8NGJ7 313 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 OR2T6Q8NHC8 308 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 RPS4Y2Q8TD47 263 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 RDH12Q96NR8 316 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 CLEC7AQ9BXN2 247 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 NPFFR1Q9GZQ6 430 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 RAB18Q9NP72 206 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 FGF20Q9NP95 211 aaPredicted RBP8.45□□□□□ -1.06
CAPN1-225ENST00000533704 MRPS18AQ9NVS2 196 aaKnown RBP8.45□□□□□ -1.06
CAPN1-225ENST00000533704 TAS2R4Q9NYW5 299 aa8.45□□□□□ -1.06
CAPN1-225ENST00000533704 IGHV2-26A0A0B4J1V2 119 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 FUOMA2VDF0 154 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 FAM90A8PA6NJQ4 464 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 F2RL2O00254 374 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 MMP23AO75900 390 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 TSPAN15O95858 294 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 CD2P06729 351 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 VSIG10L2P0DP72 767 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 JUNBP17275 347 aaPredicted RBP8.44□□□□□ -1.06
CAPN1-225ENST00000533704 MYL12AP19105 171 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 CDK2P24941 298 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 DCKP27707 260 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 ZP1P60852 638 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 RCN1Q15293 331 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 ARSJQ5FYB0 599 aaPredicted RBP8.44□□□□□ -1.06
CAPN1-225ENST00000533704 KRBOX4Q5JUW0 171 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 LDLRAD2Q5SZI1 272 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 XAF1Q6GPH4 301 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 RPL22L1Q6P5R6 122 aaKnown RBP8.44□□□□□ -1.06
CAPN1-225ENST00000533704 BAIAP2L2Q6UXY1 529 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 TMPRSS11AQ6ZMR5 421 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 Q6ZTK2 550 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 SAXO1Q8IYX7 474 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 PARP16Q8N5Y8 322 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 OR11H6Q8NGC7 330 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 OR10K1Q8NGX5 313 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 FAM110DQ8TAY7 271 aaPredicted RBP8.44□□□□□ -1.06
CAPN1-225ENST00000533704 PIFOQ8TCI5 191 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms