RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 MAB21L2Q9Y586 359 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 PRRC2AP48634 2157 aaKnown RBP9.92□□□□□ -0.82
COMMD9-208ENST00000533643 TEX15Q9BXT5 2789 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 A0A075B6Q4 140 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 TRAV24A0A0B4J272 114 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 TMEM82A0PJX8 343 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 FAM90A10PA6NDY2 464 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 FAM90A18PA6NE21 464 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 FAM90A16PA6NEW6 464 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 FAM90A20PA6NIJ5 464 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 NKX6-3A6NJ46 265 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 FAM90A8PA6NJQ4 464 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 FAM90A7PA6NKC0 464 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 FAM90A22PA8MWA6 464 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 FAM90A12PA8MX19 464 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 FAM90A5PA8MXJ8 464 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 FAM90A23PA8MXZ1 464 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 F5H0A9 414 aaPredicted RBP9.92□□□□□ -0.82
COMMD9-208ENST00000533643 SIRPB1O00241 398 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 SIGLEC5O15389 551 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 TMPRSS2O15393 492 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 ZNF737O75373 536 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 FCN3O75636 299 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 OR7C1O76099 320 aaPredicted RBP9.92□□□□□ -0.82
COMMD9-208ENST00000533643 IGHV2-5P01817 119 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 CHRM2P08172 466 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 WNT2P09544 360 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 FAM90A15PP0C7V4 464 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 FAM90A13PP0C7W8 464 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 FAM90A14PP0C7W9 464 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 FAM90A24PP0C7X0 464 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 SELLP14151 372 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 GABRR1P24046 479 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 LMO1P25800 156 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 IL13RA1P78552 427 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 MPV17LQ2QL34 196 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 MZT2AQ6P582 158 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 ZNF841Q6ZN19 808 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 CMTM4Q8IZR5 234 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 FAM216BQ8N7L0 139 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 SAMD12Q8N8I0 201 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 AP3S1Q92572 193 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 MED30Q96HR3 178 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 URM1Q9BTM9 101 aaKnown RBP9.92□□□□□ -0.82
COMMD9-208ENST00000533643 ZNF665Q9H7R5 613 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 IFT22Q9H7X7 185 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 RHBDL2Q9NX52 303 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 KAAG1Q9UBP8 84 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 CTSZQ9UBR2 303 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 MIOXQ9UGB7 285 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 PCDHB10Q9UN67 800 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 OTOGQ6ZRI0 2925 aa9.92□□□□□ -0.82
COMMD9-208ENST00000533643 FOXI3A8MTJ6 420 aaPredicted RBP9.91□□□□□ -0.82
COMMD9-208ENST00000533643 RNF223E7ERA6 249 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 SLC33A1O00400 549 aaPredicted RBP9.91□□□□□ -0.82
COMMD9-208ENST00000533643 CTDSP2O14595 271 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 SOCS1O15524 211 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 PSPNO60542 156 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 HPGDSO60760 199 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 ZNF44P15621 663 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 RPS2P15880 293 aaKnown RBP9.91□□□□□ -0.82
COMMD9-208ENST00000533643 USF1P22415 310 aaPredicted RBP9.91□□□□□ -0.82
COMMD9-208ENST00000533643 CPT2P23786 658 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 IL2RGP31785 369 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 PITPNBP48739 271 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 VEGFCP49767 419 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 TMEM50BP56557 158 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 CNPY1Q3B7I2 92 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 MOGAT2Q3SYC2 334 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 UBE2NLQ5JXB2 153 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 C17orf107Q6ZR85 190 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 SLC36A1Q7Z2H8 476 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 RTN4RL2Q86UN3 420 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 FGFRL1Q8N441 504 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 ZNF561Q8N587 486 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 SUMF2Q8NBJ7 301 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 CHST4Q8NCG5 386 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 ZNRF1Q8ND25 227 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 MCFD2Q8NI22 146 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 NEIL1Q96FI4 390 aaPredicted RBP9.91□□□□□ -0.82
COMMD9-208ENST00000533643 CYYR1Q96J86 154 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 SNX22Q96L94 193 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 REG4Q9BYZ8 158 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 ATG5Q9H1Y0 275 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 ABCG5Q9H222 651 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 MIXL1Q9H2W2 232 aa9.91□□□□□ -0.82
COMMD9-208ENST00000533643 RCC2Q9P258 522 aaKnown RBP9.91□□□□□ -0.82
COMMD9-208ENST00000533643 METTL21EPA6NDL7 271 aa9.9□□□□□ -0.82
COMMD9-208ENST00000533643 K7N7A8 449 aa9.9□□□□□ -0.82
COMMD9-208ENST00000533643 RAB27BO00194 218 aa9.9□□□□□ -0.82
COMMD9-208ENST00000533643 DVL1O14640 695 aa9.9□□□□□ -0.82
COMMD9-208ENST00000533643 NDUFB3O43676 98 aa9.9□□□□□ -0.82
COMMD9-208ENST00000533643 PDCD6O75340 191 aa9.9□□□□□ -0.82
COMMD9-208ENST00000533643 EIF4EP06730 217 aaKnown RBP9.9□□□□□ -0.82
COMMD9-208ENST00000533643 ELK1P19419 428 aa9.9□□□□□ -0.82
COMMD9-208ENST00000533643 FUT3P21217 361 aa9.9□□□□□ -0.82
COMMD9-208ENST00000533643 CHATP28329 748 aa9.9□□□□□ -0.82
COMMD9-208ENST00000533643 BLVRBP30043 206 aaPredicted RBP9.9□□□□□ -0.82
COMMD9-208ENST00000533643 OR3A1P47881 315 aa9.9□□□□□ -0.82
COMMD9-208ENST00000533643 SEC61A1P61619 476 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms