RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 DUSP21Q9H596 190 aa7.16□□□□□ -1.26
COPB1-210ENST00000533533 RBFOX1Q9NWB1 397 aaKnown RBP7.16□□□□□ -1.26
COPB1-210ENST00000533533 MTCH1Q9NZJ7 389 aa7.16□□□□□ -1.26
COPB1-210ENST00000533533 ONECUT1Q9UBC0 465 aa7.16□□□□□ -1.26
COPB1-210ENST00000533533 KAAG1Q9UBP8 84 aa7.16□□□□□ -1.26
COPB1-210ENST00000533533 F8VVB4 439 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 F8VWA3 439 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 SIGLEC5O15389 551 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 GPR137BO60478 399 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 NOS1APO75052 506 aaPredicted RBP7.15□□□□□ -1.26
COPB1-210ENST00000533533 CLPXO76031 633 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 TOX4O94842 621 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 ECDO95905 644 aaPredicted RBP7.15□□□□□ -1.26
COPB1-210ENST00000533533 MAS1P04201 325 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 ACAA1P09110 424 aaPredicted RBP7.15□□□□□ -1.26
COPB1-210ENST00000533533 BDKRB2P30411 391 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 NPBWR2P48146 333 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 PROK1P58294 105 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 ARF6P62330 175 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 SCN1BQ07699 218 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 DOC2BQ14184 412 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 KISS1Q15726 138 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 ATPAF1Q5TC12 328 aaPredicted RBP7.15□□□□□ -1.26
COPB1-210ENST00000533533 DDI2Q5TDH0 399 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 METTL11BQ5VVY1 283 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 LIPKQ5VXJ0 399 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 RNLSQ5VYX0 342 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 PRSS48Q7RTY5 328 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 Q8IYB0 196 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 FAM185AQ8N0U4 392 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 FAM58AQ8N1B3 248 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 CD177Q8N6Q3 437 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 OR52N4Q8NGI2 321 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 RPS4Y2Q8TD47 263 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 TNFAIP8L1Q8WVP5 186 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 TMEM203Q969S6 136 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 PGLYRP3Q96LB9 341 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 WDFY2Q96P53 400 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 NR1H4Q96RI1 486 aaPredicted RBP7.15□□□□□ -1.26
COPB1-210ENST00000533533 S100A13Q99584 98 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 DNTTIP1Q9H147 329 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 TCF7L1Q9HCS4 588 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 TMEM138Q9NPI0 162 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 GLS2Q9UI32 602 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 ING4Q9UNL4 249 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 GSTK1Q9Y2Q3 226 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 MAB21L2Q9Y586 359 aa7.15□□□□□ -1.26
COPB1-210ENST00000533533 IGHV1-69DA0A0B4J2H0 117 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 TRBV5-5A0A0J9YX44 114 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 SIRPB1O00241 398 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 DENRO43583 198 aaKnown RBP7.14□□□□□ -1.27
COPB1-210ENST00000533533 TSPAN15O95858 294 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 HAND1O96004 215 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 IGHV1-69P01742 117 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 IGHV4-59P01825 116 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 CHRM2P08172 466 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 GABRR1P24046 479 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 MAPK3P27361 379 aaPredicted RBP7.14□□□□□ -1.27
COPB1-210ENST00000533533 ZNF93P35789 620 aaPredicted RBP7.14□□□□□ -1.27
COPB1-210ENST00000533533 TGFBR2P37173 567 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 IER3P46695 156 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 EDDM3BP56851 147 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 ERVK11-1P61568 191 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 RPS11P62280 158 aaKnown RBP eCLIP7.14□□□□□ -1.27
COPB1-210ENST00000533533 BDH1Q02338 343 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 COL10A1Q03692 680 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 EDDM3AQ14507 147 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 IRF3Q14653 427 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 RSU1Q15404 277 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 ACSM3Q53FZ2 586 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 LDLRAD3Q86YD5 345 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 C1QL4Q86Z23 238 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 PDZD9Q8IXQ8 264 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 ZNF561Q8N587 486 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 JAGN1Q8N5M9 183 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 OR4M1Q8NGD0 313 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 OR10K1Q8NGX5 313 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 SDSLQ96GA7 329 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 SIRPDQ9H106 197 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 CNTD2Q9H8S5 307 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 HES4Q9HCC6 221 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 IL36RNQ9UBH0 155 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 RPUSD1Q9UJJ7 312 aaKnown RBP7.14□□□□□ -1.27
COPB1-210ENST00000533533 ZNF222Q9UK12 451 aa7.14□□□□□ -1.27
COPB1-210ENST00000533533 LSM2Q9Y333 95 aaKnown RBP7.14□□□□□ -1.27
COPB1-210ENST00000533533 TRAV8-7A0A075B6U6 113 aa7.13□□□□□ -1.27
COPB1-210ENST00000533533 IGKV1-12A0A0C4DH73 117 aa7.13□□□□□ -1.27
COPB1-210ENST00000533533 A0A0U1RQK1 487 aa7.13□□□□□ -1.27
COPB1-210ENST00000533533 MEX3AA1L020 520 aaKnown RBP7.13□□□□□ -1.27
COPB1-210ENST00000533533 GABRPO00591 440 aa7.13□□□□□ -1.27
COPB1-210ENST00000533533 FCN3O75636 299 aa7.13□□□□□ -1.27
COPB1-210ENST00000533533 ALX3O95076 343 aa7.13□□□□□ -1.27
COPB1-210ENST00000533533 CDRT1O95170 752 aa7.13□□□□□ -1.27
COPB1-210ENST00000533533 HTR3BO95264 441 aa7.13□□□□□ -1.27
COPB1-210ENST00000533533 IGKV1D-12P01611 117 aa7.13□□□□□ -1.27
COPB1-210ENST00000533533 CSTBP04080 98 aaKnown RBP7.13□□□□□ -1.27
COPB1-210ENST00000533533 ZNF44P15621 663 aa7.13□□□□□ -1.27
COPB1-210ENST00000533533 OR3A4PP47883 348 aa7.13□□□□□ -1.27
COPB1-210ENST00000533533 GABARAPL2P60520 117 aa7.13□□□□□ -1.27
COPB1-210ENST00000533533 ACSM1Q08AH1 577 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 329.8 ms