RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 ARL6Q9H0F7 186 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 ALX4Q9H161 411 aaPredicted RBP7□□□□□ -1.29
NEDD8-207ENST00000533242 SCPEP1Q9HB40 452 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 METRNQ9UJH8 293 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 FBXO9Q9UK97 447 aaPredicted RBP7□□□□□ -1.29
NEDD8-207ENST00000533242 RAB22AQ9UL26 194 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 ARPC4-TTLL3A0A0A6YYG9 625 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 KCNAB3O43448 404 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 VENTXO95231 258 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 DBHP09172 617 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 EGR1P18146 543 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 RAB3AP20336 220 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 CX3CR1P49238 355 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 PPOXP50336 477 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 DVL1P1P54792 670 aaPredicted RBP7□□□□□ -1.29
NEDD8-207ENST00000533242 TMEM50BP56557 158 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 PPP1R1AQ13522 171 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 GLIPR1L1Q6UWM5 242 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 C12orf45Q8N5I9 185 aaPredicted RBP7□□□□□ -1.29
NEDD8-207ENST00000533242 ADPRHL1Q8NDY3 354 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 SEMA6DQ8NFY4 1073 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 PTX4Q96A99 478 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 SEC22AQ96IW7 307 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 ZSCAN5BA6NJL1 495 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 HMSDA8MTL9 139 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 B9A039 149 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 SHOXO15266 292 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 BPNT1O95861 308 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 HLA-AP01891 365 aaKnown RBP6.99□□□□□ -1.29
NEDD8-207ENST00000533242 PMP2P02689 132 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 RLN2P04090 185 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 ZBTB25P24278 435 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 SERPINF1P36955 418 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 TGFBR3Q03167 851 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 ENDOGQ14249 297 aaKnown RBP6.99□□□□□ -1.29
NEDD8-207ENST00000533242 EFNB3Q15768 340 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 SGCAQ16586 387 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 LRRC37A5PQ49AS3 106 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 ZNF660Q6AZW8 331 aaPredicted RBP6.99□□□□□ -1.29
NEDD8-207ENST00000533242 TMEM65Q6PI78 240 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 RHOUQ7L0Q8 258 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 ZNF101Q8IZC7 436 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 LRRC18Q8N456 261 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 OR5D14Q8NGL3 314 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 OR2AJ1Q8NGZ0 328 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 COQ8AQ8NI60 647 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 ST8SIA4Q92187 359 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 NABP1Q96AH0 204 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 BOD1Q96IK1 185 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 VRK1Q99986 396 aaPredicted RBP6.99□□□□□ -1.29
NEDD8-207ENST00000533242 SLC25A21Q9BQT8 299 aaPredicted RBP6.99□□□□□ -1.29
NEDD8-207ENST00000533242 RAB1BQ9H0U4 201 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 PARPBPQ9NWS1 579 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 UPB1Q9UBR1 384 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 HDGFL3Q9Y3E1 203 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 A0A0A6YYH2 397 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 LRP5LA4QPB2 252 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 METTL21EPA6NDL7 271 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 A6NJ64 397 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 SPDEFO95238 335 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 MPIG6BO95866 241 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 ZNF20P17024 532 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 FKBP2P26885 142 aaKnown RBP6.99□□□□□ -1.29
NEDD8-207ENST00000533242 RNASE10Q5GAN6 216 aaKnown RBP6.99□□□□□ -1.29
NEDD8-207ENST00000533242 SIGIRRQ6IA17 410 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 FAM219AQ8IW50 185 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 ZNF283Q8N7M2 679 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 ZIC4Q8N9L1 334 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 OR10R2Q8NGX6 335 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 OR14K1Q8NGZ2 314 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 NEU4Q8WWR8 484 aaPredicted RBP6.99□□□□□ -1.29
NEDD8-207ENST00000533242 FOXRED1Q96CU9 486 aaPredicted RBP6.99□□□□□ -1.29
NEDD8-207ENST00000533242 UQCC2Q9BRT2 126 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 PLK3Q9H4B4 646 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 OBP2BQ9NPH6 170 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 PRR13Q9NZ81 148 aa6.99□□□□□ -1.29
NEDD8-207ENST00000533242 MRPS28Q9Y2Q9 187 aaKnown RBP6.99□□□□□ -1.29
NEDD8-207ENST00000533242 TMEM89A2RUT3 159 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 ZNF726A6NNF4 738 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 CDC14BO60729 498 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 CCL1P22362 96 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 MPGP29372 298 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 IL2RGP31785 369 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 IDH3GP51553 393 aaPredicted RBP6.98□□□□□ -1.29
NEDD8-207ENST00000533242 SCGB2A2Q13296 93 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 TAF13Q15543 124 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 MPPED2Q15777 294 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 KCNMB1Q16558 191 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 MICBQ29980 383 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 C9orf135Q5VTT2 229 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 RGS7BPQ6MZT1 257 aaPredicted RBP6.98□□□□□ -1.29
NEDD8-207ENST00000533242 CDH26Q8IXH8 852 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 SLC38A6Q8IZM9 456 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 TMEM123Q8N131 208 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 C3orf56Q8N813 242 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 OR5M8Q8NGP6 311 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 OR10K1Q8NGX5 313 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 MAFIPQ8WZ33 124 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 LINC00052Q96N35 136 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 MFFQ9GZY8 342 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms