RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 PSPNO60542 156 aa9.88□□□□□ -0.83
SSBP3-214ENST00000533209 MMP9P14780 707 aa9.88□□□□□ -0.83
SSBP3-214ENST00000533209 LMO1P25800 156 aa9.88□□□□□ -0.83
SSBP3-214ENST00000533209 OR3A1P47881 315 aa9.88□□□□□ -0.83
SSBP3-214ENST00000533209 ARF6P62330 175 aa9.88□□□□□ -0.83
SSBP3-214ENST00000533209 IL13RA2Q14627 380 aa9.88□□□□□ -0.83
SSBP3-214ENST00000533209 PDCD1Q15116 288 aa9.88□□□□□ -0.83
SSBP3-214ENST00000533209 NEDD8Q15843 81 aa9.88□□□□□ -0.83
SSBP3-214ENST00000533209 PIGYQ3MUY2 71 aa9.88□□□□□ -0.83
SSBP3-214ENST00000533209 KLF17Q5JT82 389 aaPredicted RBP9.88□□□□□ -0.83
SSBP3-214ENST00000533209 C1orf100Q5SVJ3 147 aa9.88□□□□□ -0.83
SSBP3-214ENST00000533209 SYT6Q5T7P8 510 aaPredicted RBP9.88□□□□□ -0.83
SSBP3-214ENST00000533209 GLIPR1L1Q6UWM5 242 aa9.88□□□□□ -0.83
SSBP3-214ENST00000533209 TEX29Q8N6K0 151 aa9.88□□□□□ -0.83
SSBP3-214ENST00000533209 TSPAN14Q8NG11 270 aa9.88□□□□□ -0.83
SSBP3-214ENST00000533209 NANPQ8TBE9 248 aa9.88□□□□□ -0.83
SSBP3-214ENST00000533209 UPRTQ96BW1 309 aa9.88□□□□□ -0.83
SSBP3-214ENST00000533209 NR1H4Q96RI1 486 aaPredicted RBP9.88□□□□□ -0.83
SSBP3-214ENST00000533209 GFI1Q99684 422 aa9.88□□□□□ -0.83
SSBP3-214ENST00000533209 UQCC2Q9BRT2 126 aa9.88□□□□□ -0.83
SSBP3-214ENST00000533209 C19orf12Q9NSK7 152 aa9.88□□□□□ -0.83
SSBP3-214ENST00000533209 A0A087WXM4 84 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 A0A1W2PP11 408 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 TRIM64CA6NLI5 447 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 SIRPB1O00241 398 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 ZNF780AO75290 641 aaPredicted RBP9.87□□□□□ -0.83
SSBP3-214ENST00000533209 ZNF44P15621 663 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 GALP22466 123 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 GABRR1P24046 479 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 CALRP27797 417 aaKnown RBP9.87□□□□□ -0.83
SSBP3-214ENST00000533209 RBM11P57052 281 aaKnown RBP9.87□□□□□ -0.83
SSBP3-214ENST00000533209 SLC22A6Q4U2R8 563 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 NHLRC3Q5JS37 347 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 GLT8D1Q68CQ7 371 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 AWAT2Q6E213 333 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 PRIMA1Q86XR5 153 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 FAM185AQ8N0U4 392 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 OR8H2Q8N162 312 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 OSR2Q8N2R0 312 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 KIR3DL3Q8N743 410 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 Q8N7P7 452 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 OR4S1Q8NGB4 309 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 OR4M1Q8NGD0 313 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 OR5D13Q8NGL4 314 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 TBC1D15Q8TC07 691 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 FOXRED1Q96CU9 486 aaPredicted RBP9.87□□□□□ -0.83
SSBP3-214ENST00000533209 WDFY2Q96P53 400 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 TBX15Q96SF7 602 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 S100A13Q99584 98 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 CHST6Q9GZX3 395 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 SLITRK2Q9H156 845 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 ONECUT1Q9UBC0 465 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 KPTNQ9Y664 436 aa9.87□□□□□ -0.83
SSBP3-214ENST00000533209 TRAV1-2A0A0B4J238 106 aa9.86□□□□□ -0.83
SSBP3-214ENST00000533209 A0A0G2JK05 382 aa9.86□□□□□ -0.83
SSBP3-214ENST00000533209 A0A1W2PQ09 198 aa9.86□□□□□ -0.83
SSBP3-214ENST00000533209 SHISA3A0PJX4 238 aa9.86□□□□□ -0.83
SSBP3-214ENST00000533209 SLC33A1O00400 549 aaPredicted RBP9.86□□□□□ -0.83
SSBP3-214ENST00000533209 MGST3O14880 152 aa9.86□□□□□ -0.83
SSBP3-214ENST00000533209 DEGS1O15121 323 aa9.86□□□□□ -0.83
SSBP3-214ENST00000533209 SLC22A1O15245 554 aa9.86□□□□□ -0.83
SSBP3-214ENST00000533209 TOX4O94842 621 aa9.86□□□□□ -0.83
SSBP3-214ENST00000533209 CSTBP04080 98 aaKnown RBP9.86□□□□□ -0.83
SSBP3-214ENST00000533209 IGHV4-38-2P0DP08 117 aa9.86□□□□□ -0.83
SSBP3-214ENST00000533209 SERPINA2P20848 420 aa9.86□□□□□ -0.83
SSBP3-214ENST00000533209 RPL31P62899 125 aaKnown RBP9.86□□□□□ -0.83
SSBP3-214ENST00000533209 SCN1BQ07699 218 aa9.86□□□□□ -0.83
SSBP3-214ENST00000533209 GRK1Q15835 563 aa9.86□□□□□ -0.83
SSBP3-214ENST00000533209 METTL11BQ5VVY1 283 aa9.86□□□□□ -0.83
SSBP3-214ENST00000533209 TMEM200BQ69YZ2 307 aa9.86□□□□□ -0.83
SSBP3-214ENST00000533209 GDPD3Q7L5L3 318 aa9.86□□□□□ -0.83
SSBP3-214ENST00000533209 CHST4Q8NCG5 386 aa9.86□□□□□ -0.83
SSBP3-214ENST00000533209 TMEM104Q8NE00 496 aa9.86□□□□□ -0.83
SSBP3-214ENST00000533209 PCGF1Q9BSM1 259 aa9.86□□□□□ -0.83
SSBP3-214ENST00000533209 PCDHB16Q9NRJ7 776 aa9.86□□□□□ -0.83
SSBP3-214ENST00000533209 ZNF581Q9P0T4 197 aa9.86□□□□□ -0.83
SSBP3-214ENST00000533209 ST3GAL6Q9Y274 331 aa9.86□□□□□ -0.83
SSBP3-214ENST00000533209 AK6Q9Y3D8 172 aaKnown RBP9.86□□□□□ -0.83
SSBP3-214ENST00000533209 TRAV24A0A0B4J272 114 aa9.85□□□□□ -0.83
SSBP3-214ENST00000533209 TRAV40A0A0B4J280 105 aa9.85□□□□□ -0.83
SSBP3-214ENST00000533209 GEMIN2O14893 280 aaKnown RBP9.85□□□□□ -0.83
SSBP3-214ENST00000533209 GTF2F2P13984 249 aa9.85□□□□□ -0.83
SSBP3-214ENST00000533209 EPHA1P21709 976 aa9.85□□□□□ -0.83
SSBP3-214ENST00000533209 FGF9P31371 208 aaPredicted RBP9.85□□□□□ -0.83
SSBP3-214ENST00000533209 EDDM3BP56851 147 aa9.85□□□□□ -0.83
SSBP3-214ENST00000533209 GPR176Q14439 515 aa9.85□□□□□ -0.83
SSBP3-214ENST00000533209 EDDM3AQ14507 147 aa9.85□□□□□ -0.83
SSBP3-214ENST00000533209 ZNF273Q14593 569 aa9.85□□□□□ -0.83
SSBP3-214ENST00000533209 C22orf42Q6IC83 251 aa9.85□□□□□ -0.83
SSBP3-214ENST00000533209 C1orf122Q6ZSJ8 110 aa9.85□□□□□ -0.83
SSBP3-214ENST00000533209 TCF23Q7RTU1 214 aa9.85□□□□□ -0.83
SSBP3-214ENST00000533209 VMO1Q7Z5L0 202 aa9.85□□□□□ -0.83
SSBP3-214ENST00000533209 CMTM4Q8IZR5 234 aa9.85□□□□□ -0.83
SSBP3-214ENST00000533209 TPRX1Q8N7U7 411 aa9.85□□□□□ -0.83
SSBP3-214ENST00000533209 PPP1R35Q8TAP8 253 aa9.85□□□□□ -0.83
SSBP3-214ENST00000533209 SLC25A28Q96A46 364 aa9.85□□□□□ -0.83
SSBP3-214ENST00000533209 OR51E2Q9H255 320 aa9.85□□□□□ -0.83
SSBP3-214ENST00000533209 PPA2Q9H2U2 334 aa9.85□□□□□ -0.83
SSBP3-214ENST00000533209 BANF2Q9H503 90 aa9.85□□□□□ -0.83
SSBP3-214ENST00000533209 IFT22Q9H7X7 185 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms