RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 DUX4L6P0CJ89 424 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 DUX4L7P0CJ90 424 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 ARSBP15848 533 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 NDUFB7P17568 137 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 ZFP36P26651 326 aaKnown RBP9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 CD40LGP29965 261 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 SDC2P34741 201 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 CEBPDP49716 269 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 DVL1P1P54792 670 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 OR10A3P58181 314 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 NCS1P62166 190 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 LSM3P62310 102 aaKnown RBP9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 ZNF45Q02386 682 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 IL13RA2Q14627 380 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 FAM166AQ6J272 317 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 DUX4L9Q6RFH8 374 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 GLCCI1Q86VQ1 547 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 TMEM185AQ8NFB2 350 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 OR5D13Q8NGL4 314 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 KCNG3Q8TAE7 436 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 NDNFQ8TB73 568 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 ST8SIA4Q92187 359 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 AP3S1Q92572 193 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 SLC25A28Q96A46 364 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 TMEM186Q96B77 213 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 SMR3AQ99954 134 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 FAM234AQ9H0X4 552 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 RNF167Q9H6Y7 350 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 DUX4Q9UBX2 424 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 SLC25A10Q9UBX3 287 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 OR5V1Q9UGF6 321 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 ST3GAL6Q9Y274 331 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 POLR3KQ9Y2Y1 108 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 PPIAL4CA0A0B4J2A2 164 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 A0A0G2JK05 382 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 NOTOA8MTQ0 251 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 KIAA1324LA8MWY0 1029 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 H3BUI4 141 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 K7N7A8 449 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 BPNT1O95861 308 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 OR2H2O95918 312 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 TK1P04183 234 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 LIPFP07098 398 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 ZNF44P15621 663 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 GABRR1P24046 479 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 LMO1P25800 156 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 RORCP51449 518 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 CAV3P56539 151 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 MXD1Q05195 221 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 P2RY14Q15391 338 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 C2orf76Q3KRA6 126 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 NHLRC3Q5JS37 347 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 HES5Q5TA89 166 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 BTN2A1Q7KYR7 527 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 LINC00596Q86U02 117 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 ASCC1Q8N9N2 400 aaKnown RBP9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 CHST4Q8NCG5 386 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 OR6Q1Q8NGQ2 317 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 RAB40AQ8WXH6 277 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 FAM3DQ96BQ1 224 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 PPP1R14BQ96C90 147 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 SNX22Q96L94 193 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 C1orf147Q96MC9 270 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 SELENOIQ9C0D9 397 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 BANF2Q9H503 90 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 YAE1D1Q9NRH1 226 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 HIF1ANQ9NWT6 349 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 STEAP1Q9UHE8 339 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 METRNQ9UJH8 293 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 KCNS2Q9ULS6 477 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 CELSR1Q9NYQ6 3014 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 MAST4O15021 2626 aa9.33□□□□□ -0.92
TRAPPC4-211ENST00000533012 ZNF469Q96JG9 3925 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 A0A075B6Q4 140 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 A0A1W2PP11 408 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 SMIM30A4D0T7 59 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 AIPO00170 330 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 SIRPB1O00241 398 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 GEMIN2O14893 280 aaKnown RBP9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 ZNF737O75373 536 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 OR7C1O76099 320 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 MPIG6BO95866 241 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 IL1AP01583 271 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 VSIG8P0DPA2 414 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 SELLP14151 372 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 MGMTP16455 207 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 ZNF16P17020 682 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 GATA3P23771 443 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 CFPP27918 469 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 CLDN12P56749 244 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 RBM11P57052 281 aaKnown RBP9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 KRTAP1-1Q07627 177 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 PDCD1Q15116 288 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 TAF9Q16594 264 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 RGS21Q2M5E4 152 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 MPV17LQ2QL34 196 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 PIGYQ3MUY2 71 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 SPANXN2Q5MJ10 180 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 OR10K2Q6IF99 312 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 FAHD2BQ6P2I3 314 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms