RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 OR13C5Q8NGS8 318 aa12.58□□□□□ -0.4
CPSF1-210ENST00000532935 GHSRQ92847 366 aa12.58□□□□□ -0.4
CPSF1-210ENST00000532935 RHOFQ9HBH0 211 aa12.58□□□□□ -0.4
CPSF1-210ENST00000532935 GLS2Q9UI32 602 aa12.58□□□□□ -0.4
CPSF1-210ENST00000532935 SMIM31A0A1B0GVY4 71 aa12.57□□□□□ -0.4
CPSF1-210ENST00000532935 MYL12BO14950 172 aa12.57□□□□□ -0.4
CPSF1-210ENST00000532935 HKR1P10072 659 aa12.57□□□□□ -0.4
CPSF1-210ENST00000532935 CCL3L1P16619 93 aa12.57□□□□□ -0.4
CPSF1-210ENST00000532935 GABRR1P24046 479 aa12.57□□□□□ -0.4
CPSF1-210ENST00000532935 WNT4P56705 351 aa12.57□□□□□ -0.4
CPSF1-210ENST00000532935 EDDM3BP56851 147 aa12.57□□□□□ -0.4
CPSF1-210ENST00000532935 TAS2R43P59537 309 aa12.57□□□□□ -0.4
CPSF1-210ENST00000532935 HCP5Q6MZN7 132 aa12.57□□□□□ -0.4
CPSF1-210ENST00000532935 PNKDQ8N490 385 aa12.57□□□□□ -0.4
CPSF1-210ENST00000532935 C11orf42Q8N5U0 333 aa12.57□□□□□ -0.4
CPSF1-210ENST00000532935 TMEM86BQ8N661 226 aa12.57□□□□□ -0.4
CPSF1-210ENST00000532935 CPNE2Q96FN4 548 aaPredicted RBP12.57□□□□□ -0.4
CPSF1-210ENST00000532935 PGLYRP3Q96LB9 341 aa12.57□□□□□ -0.4
CPSF1-210ENST00000532935 CHST6Q9GZX3 395 aa12.57□□□□□ -0.4
CPSF1-210ENST00000532935 TNFRSF19Q9NS68 423 aa12.57□□□□□ -0.4
CPSF1-210ENST00000532935 GSTK1Q9Y2Q3 226 aa12.57□□□□□ -0.4
CPSF1-210ENST00000532935 FAM96BQ9Y3D0 163 aa12.57□□□□□ -0.4
CPSF1-210ENST00000532935 TRBV5-5A0A0J9YX44 114 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 hCG_1809904A0A1W2PP81 198 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 A0A1W2PPE2 198 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 A0A1W2PR64 198 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 A0A1W2PRV1 198 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 SIRPB1O00241 398 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 SH2D1BO14796 132 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 PSPNO60542 156 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 TFAP2AP05549 437 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 RPS11P62280 158 aaKnown RBP eCLIP12.56□□□□□ -0.4
CPSF1-210ENST00000532935 EDDM3AQ14507 147 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 GRK1Q15835 563 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 YIF1BQ5BJH7 314 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 C16orf87Q6PH81 154 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 ZNF773Q6PK81 442 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 SATL1Q86VE3 508 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 LDLRAD3Q86YD5 345 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 NANOGP1Q8N7R0 232 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 PXT1Q8NFP0 134 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 OR52N4Q8NGI2 321 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 SSMEM1Q8WWF3 244 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 GPER1Q99527 375 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 DUSP21Q9H596 190 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 VCX3AQ9NNX9 186 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 EXOSC4Q9NPD3 245 aaKnown RBP12.56□□□□□ -0.4
CPSF1-210ENST00000532935 SF3B6Q9Y3B4 125 aaKnown RBP12.56□□□□□ -0.4
CPSF1-210ENST00000532935 POMT1Q9Y6A1 747 aa12.56□□□□□ -0.4
CPSF1-210ENST00000532935 PNMA8CA0A1B0GUJ8 204 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 MEIOCA2RUB1 952 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 DPPA5A6NC42 116 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 PTGES3LE9PB15 166 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 GABRPO00591 440 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 OR2H2O95918 312 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 ALDOBP05062 364 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 CDK1P06493 297 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 FBP1P09467 338 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 SAA4P35542 130 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 OR3A1P47881 315 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 ALDH3B2P48448 385 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 DLX6P56179 175 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 ERVFRD-1P60508 538 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 PPP3R1P63098 170 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 MEF2CQ06413 473 aaPredicted RBP12.55□□□□□ -0.4
CPSF1-210ENST00000532935 ACSM1Q08AH1 577 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 DOC2BQ14184 412 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 Q499Y3 187 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 RNLSQ5VYX0 342 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 OR4S1Q8NGB4 309 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 PPP1R35Q8TAP8 253 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 TNFAIP8L1Q8WVP5 186 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 ORAI1Q96D31 301 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 CHIAQ9BZP6 476 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 TMEM138Q9NPI0 162 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 ERGIC3Q9Y282 383 aa12.55□□□□□ -0.4
CPSF1-210ENST00000532935 MEX3AA1L020 520 aaKnown RBP12.54□□□□□ -0.4
CPSF1-210ENST00000532935 C17orf98A8MV24 154 aa12.54□□□□□ -0.4
CPSF1-210ENST00000532935 MGST3O14880 152 aa12.54□□□□□ -0.4
CPSF1-210ENST00000532935 IGHV4-59P01825 116 aa12.54□□□□□ -0.4
CPSF1-210ENST00000532935 ZNF728P0DKX0 622 aa12.54□□□□□ -0.4
CPSF1-210ENST00000532935 JUNBP17275 347 aaPredicted RBP12.54□□□□□ -0.4
CPSF1-210ENST00000532935 IGFBP3P17936 291 aaPredicted RBP12.54□□□□□ -0.4
CPSF1-210ENST00000532935 CELP19835 753 aa12.54□□□□□ -0.4
CPSF1-210ENST00000532935 LMO1P25800 156 aa12.54□□□□□ -0.4
CPSF1-210ENST00000532935 IER3P46695 156 aa12.54□□□□□ -0.4
CPSF1-210ENST00000532935 MTNR1BP49286 362 aa12.54□□□□□ -0.4
CPSF1-210ENST00000532935 BMXP51813 675 aa12.54□□□□□ -0.4
CPSF1-210ENST00000532935 SCN1BQ07699 218 aa12.54□□□□□ -0.4
CPSF1-210ENST00000532935 FOXL1Q12952 345 aa12.54□□□□□ -0.4
CPSF1-210ENST00000532935 AWAT1Q58HT5 328 aa12.54□□□□□ -0.4
CPSF1-210ENST00000532935 ELP2Q6IA86 826 aa12.54□□□□□ -0.4
CPSF1-210ENST00000532935 TCF23Q7RTU1 214 aa12.54□□□□□ -0.4
CPSF1-210ENST00000532935 TPRX1Q8N7U7 411 aa12.54□□□□□ -0.4
CPSF1-210ENST00000532935 MYDGFQ969H8 173 aa12.54□□□□□ -0.4
CPSF1-210ENST00000532935 NKX3-1Q99801 234 aaPredicted RBP12.54□□□□□ -0.4
CPSF1-210ENST00000532935 HEXA-AS1Q9H8Q6 139 aa12.54□□□□□ -0.4
CPSF1-210ENST00000532935 hADV38S2A0JD32 116 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 FAM181BA6NEQ2 426 aa12.53□□□□□ -0.4
CPSF1-210ENST00000532935 HAX1O00165 279 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms