RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 SNAPC3Q92966 411 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 FAM71F1Q96KD3 344 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 LYZL4Q96KX0 146 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 SIGLEC11Q96RL6 698 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 MICU1Q9BPX6 476 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 RTL8AQ9BWD3 113 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 BEX2Q9BXY8 128 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 GPR61Q9BZJ8 451 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 FAM192AQ9GZU8 254 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 SHARPINQ9H0F6 387 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 VCXQ9H320 206 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 DCLRE1BQ9H816 532 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 ABCB9Q9NP78 766 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 GPR84Q9NQS5 396 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 C1orf123Q9NWV4 160 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 GAR1Q9NY12 217 aaKnown RBP4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 RNF7Q9UBF6 113 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 GNG8Q9UK08 70 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 OR52A1Q9UKL2 312 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 RHBDD3Q9Y3P4 386 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 RPL36Q9Y3U8 105 aaKnown RBP4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 MPC1Q9Y5U8 109 aa4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 MAP1AP78559 2803 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P42-201ENST00000532126 PPIAL4EA0A075B759 164 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 A0A1B0GVI7 797 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 PPIAL4DF5H284 164 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 J3QRE1 110 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 P2RY10O00398 339 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 PLPP2O43688 288 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 SRSF10O75494 262 aaKnown RBP4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 FOXH1O75593 365 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 DHRS3O75911 302 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 ZFPL1O95159 310 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 FSTL3O95633 263 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 CLIC3O95833 236 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 FADS2O95864 444 aaKnown RBP4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 IGHV2-5P01817 119 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 STAG3L3P0CL85 134 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 PPIAL4FP0DN26 164 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 DBTP11182 482 aaKnown RBP4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 ACKR3P25106 362 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 CHATP28329 748 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 GABRA5P31644 462 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 CDX1P47902 265 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 GTF2A1P52655 376 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 ACTA2P62736 377 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 ACTG2P63267 376 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 RAB40BQ12829 278 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 KCNJ8Q15842 424 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 ODF4Q2M2E3 257 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 TP53I3Q53FA7 332 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 KLHL22Q53GT1 634 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 LBHQ53QV2 105 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 PLAC9Q5JTB6 97 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 FAM120AOSQ5T036 256 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 OGFRL1Q5TC84 451 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 ZNF691Q5VV52 312 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 GGNBP1Q5YKI7 109 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 FAHD2BQ6P2I3 314 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 ZNF826PQ6ZT77 177 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 KCTD8Q6ZWB6 473 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 WDR86Q86TI4 376 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 DHRSXQ8N5I4 330 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 ACBD7Q8N6N7 88 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 BOLLQ8N9W6 283 aaKnown RBP4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 SCCPDHQ8NBX0 429 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 C19orf18Q8NEA5 215 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 DEFB108BQ8NET1 73 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 OR1M1Q8NGA1 313 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 APH1BQ8WW43 257 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 OR5P3Q8WZ94 311 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 RORBQ92753 470 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 LGALS12Q96DT0 336 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 MRPL48Q96GC5 212 aaKnown RBP4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 FAHD2AQ96GK7 314 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 RNF170Q96K19 258 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 PPP1R3EQ9H7J1 279 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 PATZ1Q9HBE1 687 aaKnown RBP4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 TMEM165Q9HC07 324 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 AMBNQ9NP70 447 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 ACOXLQ9NUZ1 547 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 HIF1ANQ9NWT6 349 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 ENPP5Q9UJA9 477 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 SLC22A13Q9Y226 551 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 PIGLQ9Y2B2 252 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 EXOGQ9Y2C4 368 aaKnown RBP4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 PPIAL4AQ9Y536 164 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 RTTNQ86VV8 2226 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 MTORP42345 2549 aa4.82□□□□□ -1.64
HMGB1P42-201ENST00000532126 A0A0G2JMP0 313 aa4.81□□□□□ -1.64
HMGB1P42-201ENST00000532126 A0A0X1KG70 313 aa4.81□□□□□ -1.64
HMGB1P42-201ENST00000532126 A0A1B0GTI1 187 aa4.81□□□□□ -1.64
HMGB1P42-201ENST00000532126 FAM240BA0A1B0GVZ2 78 aa4.81□□□□□ -1.64
HMGB1P42-201ENST00000532126 SERTM2A0A1B0GWG4 89 aa4.81□□□□□ -1.64
HMGB1P42-201ENST00000532126 IRGMA1A4Y4 181 aa4.81□□□□□ -1.64
HMGB1P42-201ENST00000532126 FAM90A10PA6NDY2 464 aa4.81□□□□□ -1.64
HMGB1P42-201ENST00000532126 PCP4L1A6NKN8 68 aa4.81□□□□□ -1.64
HMGB1P42-201ENST00000532126 TMEM210A6NLX4 147 aa4.81□□□□□ -1.64
HMGB1P42-201ENST00000532126 CEACAM18A8MTB9 384 aa4.81□□□□□ -1.64
HMGB1P42-201ENST00000532126 ZNF732B4DXR9 585 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms