RNA–Protein interactions for RNA: ENST00000531995.1

PUF60-218, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-218ENST00000531995 STUB1Q9UNE7 303 aa15.36■□□□□ 0.05
PUF60-218ENST00000531995 ING4Q9UNL4 249 aa15.36■□□□□ 0.05
PUF60-218ENST00000531995 DOCK11Q5JSL3 2073 aa15.36■□□□□ 0.05
PUF60-218ENST00000531995 PPIAL4CA0A0B4J2A2 164 aa15.35■□□□□ 0.05
PUF60-218ENST00000531995 ARL6IP5O75915 188 aa15.35■□□□□ 0.05
PUF60-218ENST00000531995 PRKACAP17612 351 aa15.35■□□□□ 0.05
PUF60-218ENST00000531995 GADD45AP24522 165 aa15.35■□□□□ 0.05
PUF60-218ENST00000531995 NPY4RP50391 375 aa15.35■□□□□ 0.05
PUF60-218ENST00000531995 IKZF1Q13422 519 aa15.35■□□□□ 0.05
PUF60-218ENST00000531995 C22orf42Q6IC83 251 aa15.35■□□□□ 0.05
PUF60-218ENST00000531995 Q6P435 159 aa15.35■□□□□ 0.05
PUF60-218ENST00000531995 RBMS3Q6XE24 437 aaKnown RBP15.35■□□□□ 0.05
PUF60-218ENST00000531995 SLC36A1Q7Z2H8 476 aa15.35■□□□□ 0.05
PUF60-218ENST00000531995 BCL6BQ8N143 479 aaPredicted RBP15.35■□□□□ 0.05
PUF60-218ENST00000531995 JAGN1Q8N5M9 183 aa15.35■□□□□ 0.05
PUF60-218ENST00000531995 NKAIN3Q8N8D7 197 aa15.35■□□□□ 0.05
PUF60-218ENST00000531995 CPNE2Q96FN4 548 aaPredicted RBP15.35■□□□□ 0.05
PUF60-218ENST00000531995 MED30Q96HR3 178 aa15.35■□□□□ 0.05
PUF60-218ENST00000531995 UQCC2Q9BRT2 126 aa15.35■□□□□ 0.05
PUF60-218ENST00000531995 OR14J1Q9UGF5 321 aa15.35■□□□□ 0.05
PUF60-218ENST00000531995 AK6Q9Y3D8 172 aaKnown RBP15.35■□□□□ 0.05
PUF60-218ENST00000531995 CMYA5Q8N3K9 4069 aa15.34■□□□□ 0.05
PUF60-218ENST00000531995 IGHV3OR16-10A0A075B7F0 116 aa15.34■□□□□ 0.05
PUF60-218ENST00000531995 TRAV1-2A0A0B4J238 106 aa15.34■□□□□ 0.05
PUF60-218ENST00000531995 A0A1W2PP11 408 aa15.34■□□□□ 0.05
PUF60-218ENST00000531995 TMEM82A0PJX8 343 aa15.34■□□□□ 0.05
PUF60-218ENST00000531995 ZNF737O75373 536 aa15.34■□□□□ 0.05
PUF60-218ENST00000531995 MTNR1BP49286 362 aa15.34■□□□□ 0.05
PUF60-218ENST00000531995 SNU13P55769 128 aaKnown RBP15.34■□□□□ 0.05
PUF60-218ENST00000531995 FGF12P61328 243 aa15.34■□□□□ 0.05
PUF60-218ENST00000531995 IL13RA1P78552 427 aa15.34■□□□□ 0.05
PUF60-218ENST00000531995 COL10A1Q03692 680 aa15.34■□□□□ 0.05
PUF60-218ENST00000531995 KLF17Q5JT82 389 aaPredicted RBP15.34■□□□□ 0.05
PUF60-218ENST00000531995 GLIPR1L1Q6UWM5 242 aa15.34■□□□□ 0.05
PUF60-218ENST00000531995 OR51T1Q8NGJ9 327 aa15.34■□□□□ 0.05
PUF60-218ENST00000531995 SLC25A28Q96A46 364 aa15.34■□□□□ 0.05
PUF60-218ENST00000531995 FAM192AQ9GZU8 254 aa15.34■□□□□ 0.05
PUF60-218ENST00000531995 METTL9Q9H1A3 318 aa15.34■□□□□ 0.05
PUF60-218ENST00000531995 RNF167Q9H6Y7 350 aa15.34■□□□□ 0.05
PUF60-218ENST00000531995 GSTK1Q9Y2Q3 226 aa15.34■□□□□ 0.05
PUF60-218ENST00000531995 MRPS28Q9Y2Q9 187 aaKnown RBP15.34■□□□□ 0.05
PUF60-218ENST00000531995 AUP1Q9Y679 476 aa15.34■□□□□ 0.05
PUF60-218ENST00000531995 NKX6-3A6NJ46 265 aa15.33■□□□□ 0.04
PUF60-218ENST00000531995 NDUFB3O43676 98 aa15.33■□□□□ 0.04
PUF60-218ENST00000531995 HAND1O96004 215 aa15.33■□□□□ 0.04
PUF60-218ENST00000531995 TFAP2AP05549 437 aa15.33■□□□□ 0.04
PUF60-218ENST00000531995 CHRM2P08172 466 aa15.33■□□□□ 0.04
PUF60-218ENST00000531995 PDCD1Q15116 288 aa15.33■□□□□ 0.04
PUF60-218ENST00000531995 RSU1Q15404 277 aa15.33■□□□□ 0.04
PUF60-218ENST00000531995 C17orf107Q6ZR85 190 aa15.33■□□□□ 0.04
PUF60-218ENST00000531995 BTN2A1Q7KYR7 527 aa15.33■□□□□ 0.04
PUF60-218ENST00000531995 NR2C2APQ86WQ0 139 aa15.33■□□□□ 0.04
PUF60-218ENST00000531995 ZNF561Q8N587 486 aa15.33■□□□□ 0.04
PUF60-218ENST00000531995 LY6G5BQ8NDX9 201 aa15.33■□□□□ 0.04
PUF60-218ENST00000531995 RAB40AQ8WXH6 277 aa15.33■□□□□ 0.04
PUF60-218ENST00000531995 TAF15Q92804 592 aaKnown RBP eCLIP15.33■□□□□ 0.04
PUF60-218ENST00000531995 FOXRED1Q96CU9 486 aaPredicted RBP15.33■□□□□ 0.04
PUF60-218ENST00000531995 ZNF48Q96MX3 618 aaPredicted RBP15.33■□□□□ 0.04
PUF60-218ENST00000531995 MRI1Q9BV20 369 aa15.33■□□□□ 0.04
PUF60-218ENST00000531995 SLITRK2Q9H156 845 aa15.33■□□□□ 0.04
PUF60-218ENST00000531995 ELL3Q9HB65 397 aaPredicted RBP15.33■□□□□ 0.04
PUF60-218ENST00000531995 ZNF581Q9P0T4 197 aa15.33■□□□□ 0.04
PUF60-218ENST00000531995 NUP50Q9UKX7 468 aa15.33■□□□□ 0.04
PUF60-218ENST00000531995 INSIG2Q9Y5U4 225 aa15.33■□□□□ 0.04
PUF60-218ENST00000531995 IGHV2-70DA0A0C4DH43 119 aa15.32■□□□□ 0.04
PUF60-218ENST00000531995 KIR2DS1A0A191URI9 304 aa15.32■□□□□ 0.04
PUF60-218ENST00000531995 K7N7A8 449 aa15.32■□□□□ 0.04
PUF60-218ENST00000531995 SLC22A1O15245 554 aa15.32■□□□□ 0.04
PUF60-218ENST00000531995 KCNAB3O43448 404 aa15.32■□□□□ 0.04
PUF60-218ENST00000531995 PSPNO60542 156 aa15.32■□□□□ 0.04
PUF60-218ENST00000531995 HTR3BO95264 441 aa15.32■□□□□ 0.04
PUF60-218ENST00000531995 TK1P04183 234 aa15.32■□□□□ 0.04
PUF60-218ENST00000531995 LMO1P25800 156 aa15.32■□□□□ 0.04
PUF60-218ENST00000531995 CAV3P56539 151 aa15.32■□□□□ 0.04
PUF60-218ENST00000531995 PAX8Q06710 450 aa15.32■□□□□ 0.04
PUF60-218ENST00000531995 SPIN3Q5JUX0 258 aa15.32■□□□□ 0.04
PUF60-218ENST00000531995 GLT8D1Q68CQ7 371 aa15.32■□□□□ 0.04
PUF60-218ENST00000531995 PNLDC1Q8NA58 520 aaKnown RBP15.32■□□□□ 0.04
PUF60-218ENST00000531995 TBC1D15Q8TC07 691 aa15.32■□□□□ 0.04
PUF60-218ENST00000531995 ST8SIA4Q92187 359 aa15.32■□□□□ 0.04
PUF60-218ENST00000531995 CHCHD6Q9BRQ6 235 aa15.32■□□□□ 0.04
PUF60-218ENST00000531995 CENPOQ9BU64 300 aa15.32■□□□□ 0.04
PUF60-218ENST00000531995 SLC25A10Q9UBX3 287 aaPredicted RBP15.32■□□□□ 0.04
PUF60-218ENST00000531995 OR5V1Q9UGF6 321 aa15.32■□□□□ 0.04
PUF60-218ENST00000531995 SSR3Q9UNL2 185 aa15.32■□□□□ 0.04
PUF60-218ENST00000531995 HKR1P10072 659 aa15.31■□□□□ 0.04
PUF60-218ENST00000531995 ALDH3B2P48448 385 aa15.31■□□□□ 0.04
PUF60-218ENST00000531995 OR10A3P58181 314 aa15.31■□□□□ 0.04
PUF60-218ENST00000531995 QRFPP83859 136 aa15.31■□□□□ 0.04
PUF60-218ENST00000531995 BAMBIQ13145 260 aa15.31■□□□□ 0.04
PUF60-218ENST00000531995 PIGYQ3MUY2 71 aa15.31■□□□□ 0.04
PUF60-218ENST00000531995 SLC22A6Q4U2R8 563 aa15.31■□□□□ 0.04
PUF60-218ENST00000531995 LRRC10Q5BKY1 277 aa15.31■□□□□ 0.04
PUF60-218ENST00000531995 NHLRC3Q5JS37 347 aa15.31■□□□□ 0.04
PUF60-218ENST00000531995 OSR2Q8N2R0 312 aa15.31■□□□□ 0.04
PUF60-218ENST00000531995 TMEM104Q8NE00 496 aa15.31■□□□□ 0.04
PUF60-218ENST00000531995 OR13F1Q8NGS4 319 aa15.31■□□□□ 0.04
PUF60-218ENST00000531995 DCTN5Q9BTE1 182 aa15.31■□□□□ 0.04
PUF60-218ENST00000531995 MRPS26Q9BYN8 205 aaKnown RBP15.31■□□□□ 0.04
PUF60-218ENST00000531995 VCX3AQ9NNX9 186 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms