RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 VBP1P61758 197 aa13.99□□□□□ -0.17
PKP3-208ENST00000531857 RPS7P62081 194 aaKnown RBP13.99□□□□□ -0.17
PKP3-208ENST00000531857 CEP78Q5JTW2 689 aa13.99□□□□□ -0.17
PKP3-208ENST00000531857 SHFQ7M4L6 423 aa13.99□□□□□ -0.17
PKP3-208ENST00000531857 KCTD20Q7Z5Y7 419 aa13.99□□□□□ -0.17
PKP3-208ENST00000531857 NDUFA11Q86Y39 141 aa13.99□□□□□ -0.17
PKP3-208ENST00000531857 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.99□□□□□ -0.17
PKP3-208ENST00000531857 CD177Q8N6Q3 437 aa13.99□□□□□ -0.17
PKP3-208ENST00000531857 OR4F17Q8NGA8 305 aa13.99□□□□□ -0.17
PKP3-208ENST00000531857 OR8B12Q8NGG6 310 aa13.99□□□□□ -0.17
PKP3-208ENST00000531857 OR4F4Q96R69 305 aa13.99□□□□□ -0.17
PKP3-208ENST00000531857 HEXA-AS1Q9H8Q6 139 aa13.99□□□□□ -0.17
PKP3-208ENST00000531857 CLEC2DQ9UHP7 191 aa13.99□□□□□ -0.17
PKP3-208ENST00000531857 PEX16Q9Y5Y5 336 aa13.99□□□□□ -0.17
PKP3-208ENST00000531857 PNMA8CA0A1B0GUJ8 204 aa13.98□□□□□ -0.17
PKP3-208ENST00000531857 MTRF1O75570 445 aaKnown RBP13.98□□□□□ -0.17
PKP3-208ENST00000531857 GLCEO94923 617 aa13.98□□□□□ -0.17
PKP3-208ENST00000531857 IL1AP01583 271 aa13.98□□□□□ -0.17
PKP3-208ENST00000531857 CD1AP06126 327 aa13.98□□□□□ -0.17
PKP3-208ENST00000531857 CCL3L1P16619 93 aa13.98□□□□□ -0.17
PKP3-208ENST00000531857 CALRP27797 417 aaKnown RBP13.98□□□□□ -0.17
PKP3-208ENST00000531857 S100A5P33763 92 aa13.98□□□□□ -0.17
PKP3-208ENST00000531857 LGALS4P56470 323 aa13.98□□□□□ -0.17
PKP3-208ENST00000531857 RPL31P62899 125 aaKnown RBP13.98□□□□□ -0.17
PKP3-208ENST00000531857 Q6ZS46 218 aa13.98□□□□□ -0.17
PKP3-208ENST00000531857 BCDIN3DQ7Z5W3 292 aaKnown RBP13.98□□□□□ -0.17
PKP3-208ENST00000531857 TMEM219Q86XT9 240 aa13.98□□□□□ -0.17
PKP3-208ENST00000531857 SYS1Q8N2H4 156 aa13.98□□□□□ -0.17
PKP3-208ENST00000531857 ZNF485Q8NCK3 441 aa13.98□□□□□ -0.17
PKP3-208ENST00000531857 OR4M1Q8NGD0 313 aa13.98□□□□□ -0.17
PKP3-208ENST00000531857 THEM6Q8WUY1 208 aa13.98□□□□□ -0.17
PKP3-208ENST00000531857 AQP3Q92482 292 aa13.98□□□□□ -0.17
PKP3-208ENST00000531857 HIST1H2AAQ96QV6 131 aa13.98□□□□□ -0.17
PKP3-208ENST00000531857 CNN2Q99439 309 aaKnown RBP13.98□□□□□ -0.17
PKP3-208ENST00000531857 NXF2Q9GZY0 626 aaKnown RBP13.98□□□□□ -0.17
PKP3-208ENST00000531857 BABAM2Q9NXR7 383 aa13.98□□□□□ -0.17
PKP3-208ENST00000531857 TCF19Q9Y242 345 aa13.98□□□□□ -0.17
PKP3-208ENST00000531857 KLHDC2Q9Y2U9 406 aa13.98□□□□□ -0.17
PKP3-208ENST00000531857 A0A075B6Q4 140 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 TRDV1A0A1B0GX56 115 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 FAM90A8PA6NJQ4 464 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 RFPL4AA6NLU0 287 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 ZNF670-ZNF695F2Z2N8 137 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 RFPL4AL1F8VTS6 287 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 SELENOFO60613 162 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 MPIG6BO95866 241 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 IGLL1P15814 213 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 CEBPDP49716 269 aaPredicted RBP13.97□□□□□ -0.17
PKP3-208ENST00000531857 NCS1P62166 190 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 GNG3P63215 75 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 SSX1Q16384 188 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 CEACAM21Q3KPI0 293 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 VAX1Q5SQQ9 334 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 LDLRAD2Q5SZI1 272 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 HAGHLQ6PII5 290 aaPredicted RBP13.97□□□□□ -0.17
PKP3-208ENST00000531857 CD200R1LQ6Q8B3 271 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 ZNF322Q6U7Q0 402 aaPredicted RBP13.97□□□□□ -0.17
PKP3-208ENST00000531857 ZNF782Q6ZMW2 699 aaPredicted RBP13.97□□□□□ -0.17
PKP3-208ENST00000531857 ACP7Q6ZNF0 438 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 MS4A15Q8N5U1 240 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 DTX3Q8N9I9 347 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 OTOSQ8NHW6 89 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 MCFD2Q8NI22 146 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 ZNF671Q8TAW3 534 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 ZNF488Q96MN9 340 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 KCTD7Q96MP8 289 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 CHCHD6Q9BRQ6 235 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 WNT10AQ9GZT5 417 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 OR51V1Q9H2C8 321 aa13.97□□□□□ -0.17
PKP3-208ENST00000531857 LOC100506127A0A0U1RQW1 187 aa13.96□□□□□ -0.17
PKP3-208ENST00000531857 A6NDX4 124 aa13.96□□□□□ -0.17
PKP3-208ENST00000531857 CCDC182A6NF36 153 aa13.96□□□□□ -0.17
PKP3-208ENST00000531857 RORCP51449 518 aa13.96□□□□□ -0.17
PKP3-208ENST00000531857 PSMA6P60900 246 aaKnown RBP13.96□□□□□ -0.17
PKP3-208ENST00000531857 ZNF273Q14593 569 aa13.96□□□□□ -0.17
PKP3-208ENST00000531857 CNN3Q15417 329 aaKnown RBP13.96□□□□□ -0.17
PKP3-208ENST00000531857 CCDC58Q4VC31 144 aa13.96□□□□□ -0.17
PKP3-208ENST00000531857 KRT74Q7RTS7 529 aa13.96□□□□□ -0.17
PKP3-208ENST00000531857 OR6Q1Q8NGQ2 317 aa13.96□□□□□ -0.17
PKP3-208ENST00000531857 NDNFQ8TB73 568 aa13.96□□□□□ -0.17
PKP3-208ENST00000531857 PHYHIPQ92561 330 aa13.96□□□□□ -0.17
PKP3-208ENST00000531857 AP3S1Q92572 193 aa13.96□□□□□ -0.17
PKP3-208ENST00000531857 ALG8Q9BVK2 526 aa13.96□□□□□ -0.17
PKP3-208ENST00000531857 SLIRPQ9GZT3 109 aaKnown RBP13.96□□□□□ -0.17
PKP3-208ENST00000531857 OR51E2Q9H255 320 aa13.96□□□□□ -0.17
PKP3-208ENST00000531857 LRP12Q9Y561 859 aa13.96□□□□□ -0.17
PKP3-208ENST00000531857 TMEM14AQ9Y6G1 99 aa13.96□□□□□ -0.17
PKP3-208ENST00000531857 TMEM127O75204 238 aa13.95□□□□□ -0.18
PKP3-208ENST00000531857 SERPINA3P01011 423 aa13.95□□□□□ -0.18
PKP3-208ENST00000531857 CD40LGP29965 261 aa13.95□□□□□ -0.18
PKP3-208ENST00000531857 MAP2K3P46734 347 aa13.95□□□□□ -0.18
PKP3-208ENST00000531857 ZNF45Q02386 682 aa13.95□□□□□ -0.18
PKP3-208ENST00000531857 TMEM95Q3KNT9 176 aa13.95□□□□□ -0.18
PKP3-208ENST00000531857 C11orf87Q6NUJ2 197 aa13.95□□□□□ -0.18
PKP3-208ENST00000531857 MOB3CQ70IA8 216 aa13.95□□□□□ -0.18
PKP3-208ENST00000531857 LHFPL3Q86UP9 236 aa13.95□□□□□ -0.18
PKP3-208ENST00000531857 ZNF649Q9BS31 505 aa13.95□□□□□ -0.18
PKP3-208ENST00000531857 ADGRL4Q9HBW9 690 aa13.95□□□□□ -0.18
PKP3-208ENST00000531857 RASL12Q9NYN1 266 aa13.95□□□□□ -0.18
PKP3-208ENST00000531857 A0A1W2PPH5 198 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms