RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 OR5A2Q8NGI9 324 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 C18orf12Q96KH6 178 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 FBXO9Q9UK97 447 aaPredicted RBP14.82□□□□□ -0.04
BRCA2-204ENST00000530893 FAM221AA4D161 298 aa14.81□□□□□ -0.04
BRCA2-204ENST00000530893 CDX4O14627 284 aaPredicted RBP14.81□□□□□ -0.04
BRCA2-204ENST00000530893 RAB1AP62820 205 aa14.81□□□□□ -0.04
BRCA2-204ENST00000530893 SRPXP78539 464 aa14.81□□□□□ -0.04
BRCA2-204ENST00000530893 SPEM2Q0P670 501 aa14.81□□□□□ -0.04
BRCA2-204ENST00000530893 RPL7L1Q6DKI1 246 aaKnown RBP14.81□□□□□ -0.04
BRCA2-204ENST00000530893 FOXRED2Q8IWF2 684 aa14.81□□□□□ -0.04
BRCA2-204ENST00000530893 MCEMP1Q8IX19 187 aa14.81□□□□□ -0.04
BRCA2-204ENST00000530893 POM121L2Q96KW2 1035 aa14.81□□□□□ -0.04
BRCA2-204ENST00000530893 NKX6-2Q9C056 277 aaPredicted RBP14.81□□□□□ -0.04
BRCA2-204ENST00000530893 PLK3Q9H4B4 646 aa14.81□□□□□ -0.04
BRCA2-204ENST00000530893 PLA2G3Q9NZ20 509 aa14.81□□□□□ -0.04
BRCA2-204ENST00000530893 RCC2Q9P258 522 aaKnown RBP14.81□□□□□ -0.04
BRCA2-204ENST00000530893 TMED3Q9Y3Q3 217 aa14.81□□□□□ -0.04
BRCA2-204ENST00000530893 PPYP01298 95 aa14.8□□□□□ -0.04
BRCA2-204ENST00000530893 ATF4P18848 351 aaPredicted RBP14.8□□□□□ -0.04
BRCA2-204ENST00000530893 DUSP1P28562 367 aa14.8□□□□□ -0.04
BRCA2-204ENST00000530893 HAAOP46952 286 aa14.8□□□□□ -0.04
BRCA2-204ENST00000530893 PJVKQ0ZLH3 352 aa14.8□□□□□ -0.04
BRCA2-204ENST00000530893 C9orf135Q5VTT2 229 aa14.8□□□□□ -0.04
BRCA2-204ENST00000530893 LINC00596Q86U02 117 aa14.8□□□□□ -0.04
BRCA2-204ENST00000530893 SVBPQ8N300 66 aa14.8□□□□□ -0.04
BRCA2-204ENST00000530893 MDS2Q8NDY4 140 aa14.8□□□□□ -0.04
BRCA2-204ENST00000530893 GLYATL2Q8WU03 294 aa14.8□□□□□ -0.04
BRCA2-204ENST00000530893 HPSE2Q8WWQ2 592 aa14.8□□□□□ -0.04
BRCA2-204ENST00000530893 EXTL1Q92935 676 aa14.8□□□□□ -0.04
BRCA2-204ENST00000530893 MSI2Q96DH6 328 aaKnown RBP14.8□□□□□ -0.04
BRCA2-204ENST00000530893 LRP3O75074 770 aa14.8□□□□□ -0.04
BRCA2-204ENST00000530893 MEOX1P50221 254 aa14.8□□□□□ -0.04
BRCA2-204ENST00000530893 SULT1A2P50226 295 aa14.8□□□□□ -0.04
BRCA2-204ENST00000530893 BLOC1S1P78537 153 aa14.8□□□□□ -0.04
BRCA2-204ENST00000530893 C10orf91Q5T1B1 145 aa14.8□□□□□ -0.04
BRCA2-204ENST00000530893 TMEM268Q5VZI3 342 aa14.8□□□□□ -0.04
BRCA2-204ENST00000530893 ATRAIDQ6UW56 229 aa14.8□□□□□ -0.04
BRCA2-204ENST00000530893 Q6ZPA2 131 aa14.8□□□□□ -0.04
BRCA2-204ENST00000530893 UBAC2Q8NBM4 344 aa14.8□□□□□ -0.04
BRCA2-204ENST00000530893 GTF3AQ92664 365 aaKnown RBP14.8□□□□□ -0.04
BRCA2-204ENST00000530893 HIST1H2AAQ96QV6 131 aa14.8□□□□□ -0.04
BRCA2-204ENST00000530893 ZNF629Q9UEG4 869 aaPredicted RBP14.8□□□□□ -0.04
BRCA2-204ENST00000530893 AMDHD2Q9Y303 409 aa14.8□□□□□ -0.04
BRCA2-204ENST00000530893 LSM5Q9Y4Y9 91 aaKnown RBP14.8□□□□□ -0.04
BRCA2-204ENST00000530893 TRAPPC2LH3BP13 241 aa14.79□□□□□ -0.04
BRCA2-204ENST00000530893 DIRAS3O95661 229 aa14.79□□□□□ -0.04
BRCA2-204ENST00000530893 NAPSAO96009 420 aa14.79□□□□□ -0.04
BRCA2-204ENST00000530893 BCL3P20749 454 aa14.79□□□□□ -0.04
BRCA2-204ENST00000530893 AADACP22760 399 aa14.79□□□□□ -0.04
BRCA2-204ENST00000530893 GPM6AP51674 278 aa14.79□□□□□ -0.04
BRCA2-204ENST00000530893 SLC10A1Q14973 349 aa14.79□□□□□ -0.04
BRCA2-204ENST00000530893 MST1LQ2TV78 715 aa14.79□□□□□ -0.04
BRCA2-204ENST00000530893 SP6Q3SY56 376 aa14.79□□□□□ -0.04
BRCA2-204ENST00000530893 PHLDA2Q53GA4 152 aa14.79□□□□□ -0.04
BRCA2-204ENST00000530893 GPR157Q5UAW9 335 aa14.79□□□□□ -0.04
BRCA2-204ENST00000530893 OR2A2Q6IF42 318 aa14.79□□□□□ -0.04
BRCA2-204ENST00000530893 ZFP62Q8NB50 900 aaPredicted RBP14.79□□□□□ -0.04
BRCA2-204ENST00000530893 SPACA1Q9HBV2 294 aa14.79□□□□□ -0.04
BRCA2-204ENST00000530893 GP6Q9HCN6 339 aa14.79□□□□□ -0.04
BRCA2-204ENST00000530893 FBXL17Q9UF56 701 aa14.79□□□□□ -0.04
BRCA2-204ENST00000530893 DNASE2O00115 360 aaPredicted RBP14.78□□□□□ -0.04
BRCA2-204ENST00000530893 ABCD4O14678 606 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 MBPP02686 304 aaPredicted RBP14.78□□□□□ -0.04
BRCA2-204ENST00000530893 CTXN2P0C2S0 81 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 CD46P15529 392 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 FOXG1P55316 489 aaPredicted RBP14.78□□□□□ -0.04
BRCA2-204ENST00000530893 TMEM33P57088 247 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 IL13RA2Q14627 380 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 SMUG1Q53HV7 270 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 LYZL2Q7Z4W2 148 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 BOLLQ8N9W6 283 aaKnown RBP14.78□□□□□ -0.04
BRCA2-204ENST00000530893 SLAMF9Q96A28 289 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 TSNAXQ99598 290 aaKnown RBP14.78□□□□□ -0.04
BRCA2-204ENST00000530893 RIMS4Q9H426 269 aaPredicted RBP14.78□□□□□ -0.04
BRCA2-204ENST00000530893 Q9N2K0 584 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 CARHSP1Q9Y2V2 147 aaKnown RBP14.78□□□□□ -0.04
BRCA2-204ENST00000530893 MPC1Q9Y5U8 109 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 MUC3AQ02505 3323 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 FREM1Q5H8C1 2179 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 KIR2DS1A0A191URI9 304 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 ZNF503-AS2A6NEH8 195 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 ZNF732B4DXR9 585 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 TK1P04183 234 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 CCL2P13500 99 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 KIR2DS4P43632 304 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 RND3P61587 244 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 KIR2DS1Q14954 304 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 PDCD1Q15116 288 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 SPAG16Q8N0X2 631 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 OR5T2Q8NGG2 359 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 OR5L1Q8NGL2 311 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 FGF23Q9GZV9 251 aaPredicted RBP14.78□□□□□ -0.04
BRCA2-204ENST00000530893 PARP11Q9NR21 331 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 IL17BQ9UHF5 180 aa14.78□□□□□ -0.04
BRCA2-204ENST00000530893 AHCTF1Q8WYP5 2266 aa14.77□□□□□ -0.04
BRCA2-204ENST00000530893 OR5B21A6NL26 309 aa14.77□□□□□ -0.04
BRCA2-204ENST00000530893 CD300LBA8K4G0 201 aa14.77□□□□□ -0.04
BRCA2-204ENST00000530893 PHF1O43189 567 aaPredicted RBP14.77□□□□□ -0.04
BRCA2-204ENST00000530893 TNFSF15O95150 251 aa14.77□□□□□ -0.04
BRCA2-204ENST00000530893 ZNF205O95201 554 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms