RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 NKX2-1P43699 371 aaPredicted RBP4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 GPR4P46093 362 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 YAP1P46937 504 aaKnown RBP4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 ERFP50548 548 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 FGF12P61328 243 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 SELENOWP63302 87 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 KRR1Q13601 381 aaKnown RBP4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 KCNJ8Q15842 424 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 ZBED5Q49AG3 693 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 MESTQ5EB52 335 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 WDR25Q64LD2 544 aaPredicted RBP4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 ZNF770Q6IQ21 691 aaPredicted RBP4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 DNM1P34Q6PK57 102 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 BRD3OSQ6XYD6 125 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 MBOAT2Q6ZWT7 520 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 FAM122BQ7Z309 247 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 CYP4Z1Q86W10 505 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 LAX1Q8IWV1 398 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 MAPKAPK5-AS1Q8N8E1 139 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 BHLHE23Q8NDY6 225 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 TMEM185AQ8NFB2 350 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 C10orf82Q8WW14 230 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 SLC7A6Q92536 515 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 TAF15Q92804 592 aaKnown RBP eCLIP4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 FAM46BQ96A09 425 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 NSL1Q96IY1 281 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 Q96M85 177 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 TECTBQ96PL2 329 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 COQ7Q99807 217 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 CITED1Q99966 193 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 KRTAP2-2Q9BYT5 123 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 CHIAQ9BZP6 476 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 HDHD2Q9H0R4 259 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 SYT4Q9H2B2 425 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 RERGLQ9H628 205 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 MARCH7Q9H992 704 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 FN3KRPQ9HA64 309 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 TNFRSF19Q9NS68 423 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 TMEM100Q9NV29 134 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 AP3M1Q9Y2T2 418 aa4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 NOP16Q9Y3C1 178 aaKnown RBP4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 SOX21Q9Y651 276 aaPredicted RBP4.12□□□□□ -1.75
AMBRA1-209ENST00000529963 A0A087WUU8 490 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 ZNF879B4DU55 563 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 H0YL77 283 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 DYNC1I1O14576 645 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 CDC42EP2O14613 210 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 MLNRO43193 412 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 EDF1O60869 148 aaKnown RBP4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 ATP6V1G1O75348 118 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 NDUFB2O95178 105 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 ZNF682O95780 498 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 MELTFP08582 738 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 CFHR2P36980 270 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 FAM201AQ5SY85 155 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 METTL11BQ5VVY1 283 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 FAM53AQ6NSI3 398 aaPredicted RBP4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 SIGLEC15Q6ZMC9 328 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 ZNF620Q6ZNG0 422 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 ARPINQ7Z6K5 226 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 VTCN1Q7Z7D3 282 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 DYRK2Q92630 601 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 GGHQ92820 318 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 SLCO4A1Q96BD0 722 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 GPX7Q96SL4 187 aaPredicted RBP4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 URM1Q9BTM9 101 aaKnown RBP4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 TRIM15Q9C019 465 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 SLC22A4Q9H015 551 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 RIMS4Q9H426 269 aaPredicted RBP4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 ANKRD19PQ9H560 264 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 NMNAT1Q9HAN9 279 aaPredicted RBP4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 PDP1Q9P0J1 537 aaPredicted RBP4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 ERVK-18Q9QC07 812 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 DOCK11Q5JSL3 2073 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 TRAV38-1A0A0B4J264 116 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 A0A1B0GWJ7 208 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 ANKRD61A6NGH8 418 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 LGALS8O00214 317 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 FFAR1O14842 300 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 NDUFA2O43678 99 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 HLA-DPB1P04440 258 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 SFTPBP07988 381 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 TROVE2P10155 538 aaKnown RBP eCLIP4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 H2AFXP16104 143 aaPredicted RBP4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 ZNF26P17031 533 aaPredicted RBP4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 CRABP1P29762 137 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 PMELP40967 661 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 CD200P41217 278 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 CNN1P51911 297 aaKnown RBP4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 HIST1H3AP68431 136 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 COX10Q12887 443 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 TRAP1Q12931 704 aaKnown RBP4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 ECH1Q13011 328 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 MAB21L1Q13394 359 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 OR8G1Q15617 311 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 OR8B8Q15620 311 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 SLC36A3Q495N2 470 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 CLEC12AQ5QGZ9 265 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 HIST2H3PS2Q5TEC6 136 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 OTPQ5XKR4 325 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms