RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 SCN1BQ07699 218 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 GPR176Q14439 515 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 LRRC10Q5BKY1 277 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 GPR107Q5VW38 600 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 OR10K2Q6IF99 312 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 TPRA1Q86W33 373 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 OSR2Q8N2R0 312 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 ZNF561Q8N587 486 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 TMEM104Q8NE00 496 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 OR51T1Q8NGJ9 327 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 SEBOXQ9HB31 216 aaPredicted RBP11.62□□□□□ -0.55
USF1-209ENST00000529476 PCDHB16Q9NRJ7 776 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 ZNF581Q9P0T4 197 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 SLC25A10Q9UBX3 287 aaPredicted RBP11.62□□□□□ -0.55
USF1-209ENST00000529476 GLS2Q9UI32 602 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 TMEM82A0PJX8 343 aa11.61□□□□□ -0.55
USF1-209ENST00000529476 IFITM5A6NNB3 132 aa11.61□□□□□ -0.55
USF1-209ENST00000529476 C22orf46C9J442 243 aa11.61□□□□□ -0.55
USF1-209ENST00000529476 ZNF737O75373 536 aa11.61□□□□□ -0.55
USF1-209ENST00000529476 CRTAPO75718 401 aaPredicted RBP11.61□□□□□ -0.55
USF1-209ENST00000529476 BPNT1O95861 308 aa11.61□□□□□ -0.55
USF1-209ENST00000529476 OR2H2O95918 312 aa11.61□□□□□ -0.55
USF1-209ENST00000529476 UBBP0CG47 229 aa11.61□□□□□ -0.55
USF1-209ENST00000529476 VSIG8P0DPA2 414 aa11.61□□□□□ -0.55
USF1-209ENST00000529476 MGMTP16455 207 aa11.61□□□□□ -0.55
USF1-209ENST00000529476 NDUFB7P17568 137 aa11.61□□□□□ -0.55
USF1-209ENST00000529476 CAPZA1P52907 286 aa11.61□□□□□ -0.55
USF1-209ENST00000529476 RBM11P57052 281 aaKnown RBP11.61□□□□□ -0.55
USF1-209ENST00000529476 Q6P435 159 aa11.61□□□□□ -0.55
USF1-209ENST00000529476 METAP1DQ6UB28 335 aaPredicted RBP11.61□□□□□ -0.55
USF1-209ENST00000529476 GLCCI1Q86VQ1 547 aa11.61□□□□□ -0.55
USF1-209ENST00000529476 ANKRD13BQ86YJ7 626 aa11.61□□□□□ -0.55
USF1-209ENST00000529476 ASCC1Q8N9N2 400 aaKnown RBP11.61□□□□□ -0.55
USF1-209ENST00000529476 OR51D1Q8NGF3 324 aa11.61□□□□□ -0.55
USF1-209ENST00000529476 FAM46BQ96A09 425 aa11.61□□□□□ -0.55
USF1-209ENST00000529476 TMEM186Q96B77 213 aa11.61□□□□□ -0.55
USF1-209ENST00000529476 MMP26Q9NRE1 261 aa11.61□□□□□ -0.55
USF1-209ENST00000529476 GHRLQ9UBU3 117 aa11.61□□□□□ -0.55
USF1-209ENST00000529476 OR5V1Q9UGF6 321 aa11.61□□□□□ -0.55
USF1-209ENST00000529476 STEAP1Q9UHE8 339 aa11.61□□□□□ -0.55
USF1-209ENST00000529476 ST3GAL6Q9Y274 331 aa11.61□□□□□ -0.55
USF1-209ENST00000529476 POLR3KQ9Y2Y1 108 aaPredicted RBP11.61□□□□□ -0.55
USF1-209ENST00000529476 TLN2Q9Y4G6 2542 aa11.61□□□□□ -0.55
USF1-209ENST00000529476 NBEAL1Q6ZS30 2694 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 LOC105371242A0A075B767 164 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 A0A0B4J203 849 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 TRAV20A0A0B4J274 112 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 NOTOA8MTQ0 251 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 K7N7A8 449 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 GEMIN2O14893 280 aaKnown RBP11.6□□□□□ -0.55
USF1-209ENST00000529476 DEGS1O15121 323 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 PSPNO60542 156 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 GABARAPO95166 117 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 MPIG6BO95866 241 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 TK1P04183 234 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 SLC2A2P11168 524 aaPredicted RBP11.6□□□□□ -0.55
USF1-209ENST00000529476 ZNF44P15621 663 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 ARSBP15848 533 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 GABRR1P24046 479 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 DVL1P1P54792 670 aaPredicted RBP11.6□□□□□ -0.55
USF1-209ENST00000529476 VBP1P61758 197 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 NCS1P62166 190 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 QRFPP83859 136 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 PAX2Q02962 417 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 UNC119Q13432 240 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 IL13RA2Q14627 380 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 NHLRC3Q5JS37 347 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 C17orf107Q6ZR85 190 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 BTN2A1Q7KYR7 527 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 H1FXQ92522 213 aaKnown RBP11.6□□□□□ -0.55
USF1-209ENST00000529476 FAM3DQ96BQ1 224 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 SELENOIQ9C0D9 397 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 CHST6Q9GZX3 395 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 CST11Q9H112 138 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 YAE1D1Q9NRH1 226 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 HIF1ANQ9NWT6 349 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 WNK2Q9Y3S1 2297 aa11.6□□□□□ -0.55
USF1-209ENST00000529476 TMEM14DPA8MWL7 114 aa11.59□□□□□ -0.55
USF1-209ENST00000529476 AIPO00170 330 aa11.59□□□□□ -0.55
USF1-209ENST00000529476 SLC33A1O00400 549 aaPredicted RBP11.59□□□□□ -0.55
USF1-209ENST00000529476 LMO1P25800 156 aa11.59□□□□□ -0.55
USF1-209ENST00000529476 CFPP27918 469 aa11.59□□□□□ -0.55
USF1-209ENST00000529476 OR3A1P47881 315 aa11.59□□□□□ -0.55
USF1-209ENST00000529476 TAF9Q16594 264 aa11.59□□□□□ -0.55
USF1-209ENST00000529476 CTF1Q16619 201 aa11.59□□□□□ -0.55
USF1-209ENST00000529476 C2orf76Q3KRA6 126 aa11.59□□□□□ -0.55
USF1-209ENST00000529476 SFXN4Q6P4A7 337 aa11.59□□□□□ -0.55
USF1-209ENST00000529476 CLVS1Q8IUQ0 354 aaPredicted RBP11.59□□□□□ -0.55
USF1-209ENST00000529476 OR4S1Q8NGB4 309 aa11.59□□□□□ -0.55
USF1-209ENST00000529476 KCNG3Q8TAE7 436 aa11.59□□□□□ -0.55
USF1-209ENST00000529476 DACT3Q96B18 629 aaPredicted RBP11.59□□□□□ -0.55
USF1-209ENST00000529476 MRPS24Q96EL2 167 aaKnown RBP11.59□□□□□ -0.55
USF1-209ENST00000529476 SNX22Q96L94 193 aa11.59□□□□□ -0.55
USF1-209ENST00000529476 SHARPINQ9H0F6 387 aa11.59□□□□□ -0.55
USF1-209ENST00000529476 FAM234AQ9H0X4 552 aa11.59□□□□□ -0.55
USF1-209ENST00000529476 PPA2Q9H2U2 334 aa11.59□□□□□ -0.55
USF1-209ENST00000529476 DAPK2Q9UIK4 370 aa11.59□□□□□ -0.55
USF1-209ENST00000529476 TRAV24A0A0B4J272 114 aa11.58□□□□□ -0.56
USF1-209ENST00000529476 IGHV2-70DA0A0C4DH43 119 aa11.58□□□□□ -0.56
USF1-209ENST00000529476 HSPB6O14558 160 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms