RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 UGT2B11O75310 529 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 EIF3GO75821 320 aaKnown RBP eCLIP4.24□□□□□ -1.73
PCF11-202ENST00000528336 ATP6V1G2O95670 118 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 HPRT1P00492 218 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 ARG1P05089 322 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 OR5AL1P0C617 328 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 GABRG2P18507 467 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 PVALBP20472 110 aaPredicted RBP4.24□□□□□ -1.73
PCF11-202ENST00000528336 GDF1P27539 372 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 SERPINB1P30740 379 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 GPX4P36969 197 aaPredicted RBP4.24□□□□□ -1.73
PCF11-202ENST00000528336 DLX6P56179 175 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 ZNF121P58317 390 aaPredicted RBP4.24□□□□□ -1.73
PCF11-202ENST00000528336 MRPS11P82912 194 aaKnown RBP4.24□□□□□ -1.73
PCF11-202ENST00000528336 IL18R1Q13478 541 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 EIF4EBP2Q13542 120 aaPredicted RBP4.24□□□□□ -1.73
PCF11-202ENST00000528336 CLLU1OSQ5K130 101 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 TPTE2P1Q5T6R2 138 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 UBE2UQ5VVX9 321 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 OLFML2AQ68BL7 652 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 DHRS4L2Q6PKH6 230 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 EPGNQ6UW88 154 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 PAMR1Q6UXH9 720 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 TMED4Q7Z7H5 227 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 S100A7AQ86SG5 101 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 SLC30A8Q8IWU4 369 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 ARRDC1Q8N5I2 433 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 C11orf42Q8N5U0 333 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 HSD17B11Q8NBQ5 300 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 OR10J5Q8NHC4 309 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 RFESDQ8TAC1 157 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 RAB8BQ92930 207 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 EEF1AKMT3Q96AZ1 226 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 TESCQ96BS2 214 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 TMEM56Q96MV1 263 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 RBP7Q96R05 134 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 OSBPL11Q9BXB4 747 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 ABCB9Q9NP78 766 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 HES2Q9Y543 173 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 COL4A6Q14031 1691 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 ARL5CA6NH57 179 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 AZIN1O14977 448 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 FABP7O15540 132 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 MGRN1O60291 552 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 SLC22A5O76082 557 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 LALBAP00709 142 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 CD5P06127 495 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 NBEAP1P0C6P0 100 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 LAMP1P11279 417 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 KCNE1P15382 129 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 RPA3P35244 121 aaPredicted RBP4.23□□□□□ -1.73
PCF11-202ENST00000528336 MDH2P40926 338 aaKnown RBP4.23□□□□□ -1.73
PCF11-202ENST00000528336 SLC25A1P53007 311 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 DLX1P56177 255 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 CXCL6P80162 114 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 IGLV3-21P80748 117 aaPredicted RBP4.23□□□□□ -1.73
PCF11-202ENST00000528336 NDPQ00604 133 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 ECH1Q13011 328 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 FAM53BQ14153 422 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 PON3Q15166 354 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 PARP15Q460N3 678 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 PRR30Q53SZ7 412 aaPredicted RBP4.23□□□□□ -1.73
PCF11-202ENST00000528336 HBMQ6B0K9 141 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 FAM131AQ6UXB0 335 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 TFAP2EQ6VUC0 442 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 GPR32P1Q8NGA4 272 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 OR2A1Q8NGT9 310 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 OR11L1Q8NGX0 322 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 HAVCR2Q8TDQ0 301 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 SIGLEC12Q96PQ1 595 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 HOPXQ9BPY8 73 aaPredicted RBP4.23□□□□□ -1.73
PCF11-202ENST00000528336 TMEM109Q9BVC6 243 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 UGT2B28Q9BY64 529 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 DEFB126Q9BYW3 111 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 C12orf4Q9NQ89 552 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 KLHL21Q9UJP4 597 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 ZNF256Q9Y2P7 627 aaPredicted RBP4.23□□□□□ -1.73
PCF11-202ENST00000528336 CHD9Q3L8U1 2897 aa4.23□□□□□ -1.73
PCF11-202ENST00000528336 MICAL3Q7RTP6 2002 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 ZNF816-ZNF321PA0A0X1KG74 233 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 ZNF729A6NN14 1252 aaPredicted RBP4.22□□□□□ -1.73
PCF11-202ENST00000528336 NCBP2LA6PVI3 153 aaKnown RBP4.22□□□□□ -1.73
PCF11-202ENST00000528336 ANKRD65E5RJM6 399 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 GATBO75879 557 aaKnown RBP4.22□□□□□ -1.73
PCF11-202ENST00000528336 TYMSP04818 313 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 GUSBP08236 651 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 CXCL8P10145 99 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 USF1P22415 310 aaPredicted RBP4.22□□□□□ -1.73
PCF11-202ENST00000528336 ACOT2P49753 483 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 PPOXP50336 477 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 SUB1P53999 127 aaKnown RBP eCLIP4.22□□□□□ -1.73
PCF11-202ENST00000528336 PPP1CBP62140 327 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 KCNJ11Q14654 390 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 POU6F1Q14863 301 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 SPA17Q15506 151 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 OR7A5Q15622 319 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 TRIP13Q15645 432 aaPredicted RBP4.22□□□□□ -1.73
PCF11-202ENST00000528336 SNRNP35Q16560 246 aaKnown RBP4.22□□□□□ -1.73
PCF11-202ENST00000528336 ALKAL1Q6UXT8 129 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 FAM92BQ6ZTR7 304 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms