RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 LIMS4P0CW20 117 aa11.55□□□□□ -0.56
CAPN1-212ENST00000527887 KIR2DS4P43632 304 aa11.55□□□□□ -0.56
CAPN1-212ENST00000527887 MAP2K4P45985 399 aa11.55□□□□□ -0.56
CAPN1-212ENST00000527887 WNT4P56705 351 aa11.55□□□□□ -0.56
CAPN1-212ENST00000527887 KRTAP10-3P60369 221 aa11.55□□□□□ -0.56
CAPN1-212ENST00000527887 MEF2CQ06413 473 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-212ENST00000527887 MLLT11Q13015 90 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-212ENST00000527887 GPR50Q13585 617 aa11.55□□□□□ -0.56
CAPN1-212ENST00000527887 GALEQ14376 348 aa11.55□□□□□ -0.56
CAPN1-212ENST00000527887 CNN3Q15417 329 aaKnown RBP11.55□□□□□ -0.56
CAPN1-212ENST00000527887 UBE2V2Q15819 145 aa11.55□□□□□ -0.56
CAPN1-212ENST00000527887 SLC35E4Q6ICL7 350 aa11.55□□□□□ -0.56
CAPN1-212ENST00000527887 ZNF485Q8NCK3 441 aa11.55□□□□□ -0.56
CAPN1-212ENST00000527887 YIPF6Q96EC8 236 aa11.55□□□□□ -0.56
CAPN1-212ENST00000527887 BORCS8Q96FH0 119 aa11.55□□□□□ -0.56
CAPN1-212ENST00000527887 MGLLQ99685 303 aa11.55□□□□□ -0.56
CAPN1-212ENST00000527887 ZNF649Q9BS31 505 aa11.55□□□□□ -0.56
CAPN1-212ENST00000527887 PPA2Q9H2U2 334 aa11.55□□□□□ -0.56
CAPN1-212ENST00000527887 RANBP3Q9H6Z4 567 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-212ENST00000527887 ERVK13-1Q9NX77 482 aa11.55□□□□□ -0.56
CAPN1-212ENST00000527887 OR14J1Q9UGF5 321 aa11.55□□□□□ -0.56
CAPN1-212ENST00000527887 RSL24D1Q9UHA3 163 aaKnown RBP11.55□□□□□ -0.56
CAPN1-212ENST00000527887 FAM90A8PA6NJQ4 464 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 VGLL3A8MV65 326 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 KCNAB3O43448 404 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 NOL3O60936 208 aaKnown RBP11.54□□□□□ -0.56
CAPN1-212ENST00000527887 CYB5AP00167 134 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 ISG15P05161 165 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 PRKACBP22694 351 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 PSMB9P28065 219 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 GABRA5P31644 462 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 RBP2P50120 134 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 ATP1B3P54709 279 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 DEFA6Q01524 100 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 COL10A1Q03692 680 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 TPBGQ13641 420 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 TIMM50Q3ZCQ8 353 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 FOXB2Q5VYV0 432 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 FDX2Q6P4F2 183 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 UTS2BQ765I0 119 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 GDPD3Q7L5L3 318 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 OR8H2Q8N162 312 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 SYS1Q8N2H4 156 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 ASCC1Q8N9N2 400 aaKnown RBP11.54□□□□□ -0.56
CAPN1-212ENST00000527887 OR4M1Q8NGD0 313 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 OR13D1Q8NGV5 346 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 TRMT10AQ8TBZ6 339 aaKnown RBP11.54□□□□□ -0.56
CAPN1-212ENST00000527887 AJUBAQ96IF1 538 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 SNX22Q96L94 193 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 MTCH1Q9NZJ7 389 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 GNG8Q9UK08 70 aa11.54□□□□□ -0.56
CAPN1-212ENST00000527887 TBL2Q9Y4P3 447 aaKnown RBP11.54□□□□□ -0.56
CAPN1-212ENST00000527887 DAPL1A0PJW8 107 aa11.53□□□□□ -0.56
CAPN1-212ENST00000527887 ZNF737O75373 536 aa11.53□□□□□ -0.56
CAPN1-212ENST00000527887 ZNF728P0DKX0 622 aa11.53□□□□□ -0.56
CAPN1-212ENST00000527887 CEBPDP49716 269 aaPredicted RBP11.53□□□□□ -0.56
CAPN1-212ENST00000527887 ETV1P50549 477 aa11.53□□□□□ -0.56
CAPN1-212ENST00000527887 CCR9P51686 369 aa11.53□□□□□ -0.56
CAPN1-212ENST00000527887 TAS2R43P59537 309 aa11.53□□□□□ -0.56
CAPN1-212ENST00000527887 ACTA2P62736 377 aa11.53□□□□□ -0.56
CAPN1-212ENST00000527887 ACTG2P63267 376 aa11.53□□□□□ -0.56
CAPN1-212ENST00000527887 ZNF85Q03923 595 aa11.53□□□□□ -0.56
CAPN1-212ENST00000527887 MRPL28Q13084 256 aaKnown RBP11.53□□□□□ -0.56
CAPN1-212ENST00000527887 ODF4Q2M2E3 257 aa11.53□□□□□ -0.56
CAPN1-212ENST00000527887 C2orf68Q2NKX9 166 aa11.53□□□□□ -0.56
CAPN1-212ENST00000527887 CLVS1Q8IUQ0 354 aaPredicted RBP11.53□□□□□ -0.56
CAPN1-212ENST00000527887 PRSS35Q8N3Z0 413 aa11.53□□□□□ -0.56
CAPN1-212ENST00000527887 OR4C13Q8NGP0 309 aa11.53□□□□□ -0.56
CAPN1-212ENST00000527887 FOXRED1Q96CU9 486 aaPredicted RBP11.53□□□□□ -0.56
CAPN1-212ENST00000527887 MALSU1Q96EH3 234 aa11.53□□□□□ -0.56
CAPN1-212ENST00000527887 FUNDC2Q9BWH2 189 aa11.53□□□□□ -0.56
CAPN1-212ENST00000527887 NEK6Q9HC98 313 aa11.53□□□□□ -0.56
CAPN1-212ENST00000527887 GLS2Q9UI32 602 aa11.53□□□□□ -0.56
CAPN1-212ENST00000527887 NOTCH1P46531 2555 aa11.52□□□□□ -0.56
CAPN1-212ENST00000527887 LOC107986453A0A1B0GWG9 222 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 hADV38S2A0JD32 116 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 CCRL2O00421 344 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 GABARAPO95166 117 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 APOL3O95236 402 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 CCL3L1P16619 93 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 CPEP16870 476 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 GALP22466 123 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 DLX6P56179 175 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 ZNF273Q14593 569 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 ZNF146Q15072 292 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 MED22Q15528 200 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 PDLIM3Q53GG5 364 aaPredicted RBP11.52□□□□□ -0.57
CAPN1-212ENST00000527887 GPR107Q5VW38 600 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 CRIP3Q6Q6R5 217 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 LHFPL2Q6ZUX7 228 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 SLC25A26Q70HW3 274 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 OR11H6Q8NGC7 330 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 OR2G2Q8NGZ5 317 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 OR2T6Q8NHC8 308 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 PPP1R35Q8TAP8 253 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 C17orf50Q8WW18 174 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 SPSB1Q96BD6 273 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 ISOC1Q96CN7 298 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 NPFFR1Q9GZQ6 430 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 RHOFQ9HBH0 211 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms