RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 ZNF841Q6ZN19 808 aa13.76□□□□□ -0.21
CAPN1-205ENST00000526954 NLRC3Q7RTR2 1065 aa13.76□□□□□ -0.21
CAPN1-205ENST00000526954 FAM89BQ8N5H3 189 aa13.76□□□□□ -0.21
CAPN1-205ENST00000526954 CHST4Q8NCG5 386 aa13.76□□□□□ -0.21
CAPN1-205ENST00000526954 FAM46BQ96A09 425 aa13.76□□□□□ -0.21
CAPN1-205ENST00000526954 NEIL1Q96FI4 390 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-205ENST00000526954 BATF3Q9NR55 127 aa13.76□□□□□ -0.21
CAPN1-205ENST00000526954 CTSZQ9UBR2 303 aa13.76□□□□□ -0.21
CAPN1-205ENST00000526954 ETV7Q9Y603 341 aa13.76□□□□□ -0.21
CAPN1-205ENST00000526954 GEMIN2O14893 280 aaKnown RBP13.75□□□□□ -0.21
CAPN1-205ENST00000526954 DEGS1O15121 323 aa13.75□□□□□ -0.21
CAPN1-205ENST00000526954 ZNF737O75373 536 aa13.75□□□□□ -0.21
CAPN1-205ENST00000526954 OR2H2O95918 312 aa13.75□□□□□ -0.21
CAPN1-205ENST00000526954 PAHP00439 452 aa13.75□□□□□ -0.21
CAPN1-205ENST00000526954 TFF1P04155 84 aa13.75□□□□□ -0.21
CAPN1-205ENST00000526954 HEXAP06865 529 aa13.75□□□□□ -0.21
CAPN1-205ENST00000526954 SNRPBP14678 240 aaKnown RBP13.75□□□□□ -0.21
CAPN1-205ENST00000526954 ZNF182P17025 639 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-205ENST00000526954 NPY4RP50391 375 aa13.75□□□□□ -0.21
CAPN1-205ENST00000526954 COL10A1Q03692 680 aa13.75□□□□□ -0.21
CAPN1-205ENST00000526954 FAM189A2Q15884 450 aa13.75□□□□□ -0.21
CAPN1-205ENST00000526954 TAF9Q16594 264 aa13.75□□□□□ -0.21
CAPN1-205ENST00000526954 OR8B3Q8NGG8 313 aa13.75□□□□□ -0.21
CAPN1-205ENST00000526954 LGALS14Q8TCE9 139 aa13.75□□□□□ -0.21
CAPN1-205ENST00000526954 ACOT12Q8WYK0 555 aa13.75□□□□□ -0.21
CAPN1-205ENST00000526954 C1orf159Q96HA4 380 aa13.75□□□□□ -0.21
CAPN1-205ENST00000526954 OR8B2Q96RD0 313 aa13.75□□□□□ -0.21
CAPN1-205ENST00000526954 URM1Q9BTM9 101 aaKnown RBP13.75□□□□□ -0.21
CAPN1-205ENST00000526954 LPAR5Q9H1C0 372 aa13.75□□□□□ -0.21
CAPN1-205ENST00000526954 CCDC59Q9P031 241 aaKnown RBP13.75□□□□□ -0.21
CAPN1-205ENST00000526954 METRNQ9UJH8 293 aa13.75□□□□□ -0.21
CAPN1-205ENST00000526954 SPATA2Q9UM82 520 aa13.75□□□□□ -0.21
CAPN1-205ENST00000526954 ITPR3Q14573 2671 aa13.75□□□□□ -0.21
CAPN1-205ENST00000526954 A0A1B0GW55 424 aa13.74□□□□□ -0.21
CAPN1-205ENST00000526954 H3BUI4 141 aa13.74□□□□□ -0.21
CAPN1-205ENST00000526954 K7N7A8 449 aa13.74□□□□□ -0.21
CAPN1-205ENST00000526954 DUX4L2P0CJ85 424 aa13.74□□□□□ -0.21
CAPN1-205ENST00000526954 DUX4L3P0CJ86 424 aa13.74□□□□□ -0.21
CAPN1-205ENST00000526954 DUX4L4P0CJ87 422 aa13.74□□□□□ -0.21
CAPN1-205ENST00000526954 DUX4L5P0CJ88 424 aa13.74□□□□□ -0.21
CAPN1-205ENST00000526954 DUX4L6P0CJ89 424 aa13.74□□□□□ -0.21
CAPN1-205ENST00000526954 DUX4L7P0CJ90 424 aa13.74□□□□□ -0.21
CAPN1-205ENST00000526954 IL2RGP31785 369 aa13.74□□□□□ -0.21
CAPN1-205ENST00000526954 SOX6P35712 828 aa13.74□□□□□ -0.21
CAPN1-205ENST00000526954 PITPNBP48739 271 aa13.74□□□□□ -0.21
CAPN1-205ENST00000526954 PLA2G7Q13093 441 aa13.74□□□□□ -0.21
CAPN1-205ENST00000526954 IKZF1Q13422 519 aa13.74□□□□□ -0.21
CAPN1-205ENST00000526954 C11orf91Q3C1V1 193 aa13.74□□□□□ -0.21
CAPN1-205ENST00000526954 DUX4L9Q6RFH8 374 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-205ENST00000526954 FAM216BQ8N7L0 139 aa13.74□□□□□ -0.21
CAPN1-205ENST00000526954 ZNRF1Q8ND25 227 aa13.74□□□□□ -0.21
CAPN1-205ENST00000526954 OR5H6Q8NGV6 325 aa13.74□□□□□ -0.21
CAPN1-205ENST00000526954 SNX22Q96L94 193 aa13.74□□□□□ -0.21
CAPN1-205ENST00000526954 FAM234AQ9H0X4 552 aa13.74□□□□□ -0.21
CAPN1-205ENST00000526954 DUX4Q9UBX2 424 aa13.74□□□□□ -0.21
CAPN1-205ENST00000526954 OTOGQ6ZRI0 2925 aa13.74□□□□□ -0.21
CAPN1-205ENST00000526954 TRAV24A0A0B4J272 114 aa13.73□□□□□ -0.21
CAPN1-205ENST00000526954 TMEM82A0PJX8 343 aa13.73□□□□□ -0.21
CAPN1-205ENST00000526954 SLC33A1O00400 549 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-205ENST00000526954 DVL1O14640 695 aa13.73□□□□□ -0.21
CAPN1-205ENST00000526954 GPR37O15354 613 aa13.73□□□□□ -0.21
CAPN1-205ENST00000526954 NDUFB3O43676 98 aa13.73□□□□□ -0.21
CAPN1-205ENST00000526954 PSPNO60542 156 aa13.73□□□□□ -0.21
CAPN1-205ENST00000526954 FCN3O75636 299 aa13.73□□□□□ -0.21
CAPN1-205ENST00000526954 OR7C1O76099 320 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-205ENST00000526954 ZNF44P15621 663 aa13.73□□□□□ -0.21
CAPN1-205ENST00000526954 EFNB2P52799 333 aa13.73□□□□□ -0.21
CAPN1-205ENST00000526954 PDCD1Q15116 288 aa13.73□□□□□ -0.21
CAPN1-205ENST00000526954 LRRC10Q5BKY1 277 aa13.73□□□□□ -0.21
CAPN1-205ENST00000526954 WDR25Q64LD2 544 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-205ENST00000526954 SIGIRRQ6IA17 410 aa13.73□□□□□ -0.21
CAPN1-205ENST00000526954 C17orf107Q6ZR85 190 aa13.73□□□□□ -0.21
CAPN1-205ENST00000526954 OR5D13Q8NGL4 314 aa13.73□□□□□ -0.21
CAPN1-205ENST00000526954 AP3S1Q92572 193 aa13.73□□□□□ -0.21
CAPN1-205ENST00000526954 SHARPINQ9H0F6 387 aa13.73□□□□□ -0.21
CAPN1-205ENST00000526954 SPACA1Q9HBV2 294 aa13.73□□□□□ -0.21
CAPN1-205ENST00000526954 RCC2Q9P258 522 aaKnown RBP13.73□□□□□ -0.21
CAPN1-205ENST00000526954 MALRD1Q5VYJ5 2156 aa13.73□□□□□ -0.21
CAPN1-205ENST00000526954 TEX15Q9BXT5 2789 aa13.72□□□□□ -0.21
CAPN1-205ENST00000526954 A0A0A6YYD4 124 aa13.72□□□□□ -0.21
CAPN1-205ENST00000526954 METTL21EPA6NDL7 271 aa13.72□□□□□ -0.21
CAPN1-205ENST00000526954 FOXI3A8MTJ6 420 aaPredicted RBP13.72□□□□□ -0.21
CAPN1-205ENST00000526954 A8MXK9 166 aa13.72□□□□□ -0.21
CAPN1-205ENST00000526954 H7C1Q1 480 aa13.72□□□□□ -0.21
CAPN1-205ENST00000526954 SIRPB1O00241 398 aa13.72□□□□□ -0.21
CAPN1-205ENST00000526954 TK1P04183 234 aa13.72□□□□□ -0.21
CAPN1-205ENST00000526954 GLAP06280 429 aa13.72□□□□□ -0.21
CAPN1-205ENST00000526954 SELLP14151 372 aa13.72□□□□□ -0.21
CAPN1-205ENST00000526954 GABRR1P24046 479 aa13.72□□□□□ -0.21
CAPN1-205ENST00000526954 SEC61A1P61619 476 aaKnown RBP13.72□□□□□ -0.21
CAPN1-205ENST00000526954 SCN1BQ07699 218 aa13.72□□□□□ -0.21
CAPN1-205ENST00000526954 ESCO2Q56NI9 601 aa13.72□□□□□ -0.21
CAPN1-205ENST00000526954 CIARTQ8N365 385 aaPredicted RBP13.72□□□□□ -0.21
CAPN1-205ENST00000526954 ASCC1Q8N9N2 400 aaKnown RBP13.72□□□□□ -0.21
CAPN1-205ENST00000526954 PPP1R35Q8TAP8 253 aa13.72□□□□□ -0.21
CAPN1-205ENST00000526954 SLC25A38Q96DW6 304 aa13.72□□□□□ -0.21
CAPN1-205ENST00000526954 CMTM3Q96MX0 182 aa13.72□□□□□ -0.21
CAPN1-205ENST00000526954 NICN1Q9BSH3 213 aa13.72□□□□□ -0.21
CAPN1-205ENST00000526954 SSBP3Q9BWW4 388 aaPredicted RBP13.72□□□□□ -0.21
CAPN1-205ENST00000526954 ZNF581Q9P0T4 197 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms