RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 USP54Q70EL1 1684 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 BRCA1P38398 1863 aaKnown RBP3.59□□□□□ -1.83
CD44-213ENST00000525209 TRAV8-4A0A0B4J246 113 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 A0A1B0GV90 55 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 IGSF23A1L1A6 192 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 ATP6V1G2-DDX39BF2Z307 99 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 GALR3O60755 368 aaPredicted RBP3.59□□□□□ -1.83
CD44-213ENST00000525209 STK16O75716 305 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 SEMA4FO95754 770 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 AIFM1O95831 613 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 P01737 135 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 IGKV5-2P06315 115 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 OR13C7P0DN81 318 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 RCC1P18754 421 aaPredicted RBP3.59□□□□□ -1.83
CD44-213ENST00000525209 OMGP23515 440 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 PSMB9P28065 219 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 CD38P28907 300 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 MYCNOSP40205 109 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 OR1E2P47887 323 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 RPL29P47914 159 aaKnown RBP3.59□□□□□ -1.83
CD44-213ENST00000525209 CCR6P51684 374 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 IHHQ14623 411 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 ICAM4Q14773 271 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 DAZAP2Q15038 168 aaPredicted RBP3.59□□□□□ -1.83
CD44-213ENST00000525209 RBMS2Q15434 407 aaKnown RBP3.59□□□□□ -1.83
CD44-213ENST00000525209 SNRNP35Q16560 246 aaKnown RBP3.59□□□□□ -1.83
CD44-213ENST00000525209 WHAMMP3Q1A5X7 153 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 LRRC36Q1X8D7 754 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 ZNF585BQ52M93 769 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 PAGE3Q5JUK9 113 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 LAMTOR1Q6IAA8 161 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 CNIH2Q6PI25 160 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 C3orf62Q6ZUJ4 267 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 GRINAQ7Z429 371 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 PPP1R27Q86WC6 154 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 HOGA1Q86XE5 327 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 C1orf158Q8N1D5 194 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 EIF4E3Q8N5X7 224 aaKnown RBP3.59□□□□□ -1.83
CD44-213ENST00000525209 COX18Q8N8Q8 333 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 OR8J3Q8NGG0 315 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 OR9A2Q8NGT5 310 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 OR13C6PQ8NH95 151 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 SPPL2BQ8TCT7 592 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 CD200R1Q8TD46 325 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 BLNKQ8WV28 456 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 EXTL1Q92935 676 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 LRRC58Q96CX6 371 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 ANKRD36BP1Q96IX9 119 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 ZNF285Q96NJ3 590 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 BIRC8Q96P09 236 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 PITX2Q99697 317 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 KIR2DL4Q99706 377 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 C2orf88Q9BSF0 95 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 FAAP24Q9BTP7 215 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 SRXN1Q9BYN0 137 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 SLC25A39Q9BZJ4 359 aaPredicted RBP3.59□□□□□ -1.83
CD44-213ENST00000525209 KLK15Q9H2R5 256 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 RPF2Q9H7B2 306 aaKnown RBP3.59□□□□□ -1.83
CD44-213ENST00000525209 RRAGDQ9NQL2 400 aaPredicted RBP3.59□□□□□ -1.83
CD44-213ENST00000525209 SPANXA1Q9NS26 97 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 TAS2R5Q9NYW4 299 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 DNAJC27Q9NZQ0 273 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 VAX2Q9UIW0 290 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 KCNE3Q9Y6H6 103 aa3.59□□□□□ -1.83
CD44-213ENST00000525209 MEGF6O75095 1541 aa3.59□□□□□ -1.84
CD44-213ENST00000525209 MON2Q7Z3U7 1717 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 AFDNP55196 1824 aaKnown RBP3.58□□□□□ -1.84
CD44-213ENST00000525209 DICER1Q9UPY3 1922 aaKnown RBP3.58□□□□□ -1.84
CD44-213ENST00000525209 A0A0U1RQV1 116 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 EXOC1LA0A1B0GW35 172 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 TRABD2BA6NFA1 517 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 J3QT63 122 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 MANBAO00462 879 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 EIF1BO60739 113 aaKnown RBP3.58□□□□□ -1.84
CD44-213ENST00000525209 PTHP01270 115 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 IGHG1P01857 330 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 H2AFZP0C0S5 128 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 ESDP10768 282 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 ATF1P18846 271 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 PAX6P26367 422 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 ERP29P30040 261 aaKnown RBP3.58□□□□□ -1.84
CD44-213ENST00000525209 EIF1P41567 113 aaKnown RBP3.58□□□□□ -1.84
CD44-213ENST00000525209 KIR2DS2P43631 304 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 REG1BP48304 166 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 GZMMP51124 257 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 MTPNP58546 118 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 CDK10Q15131 360 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 RSU1Q15404 277 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 MICAQ29983 383 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 CDNFQ49AH0 187 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 MUC21Q5SSG8 566 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 C11orf71Q6IPW1 123 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 TMEM205Q6UW68 189 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 ZNF66Q6ZN08 573 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 FOXL2NBQ6ZUU3 175 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 OAFQ86UD1 273 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 CARM1Q86X55 608 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 CADM2Q8N3J6 435 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 NPWQ8N729 165 aa3.58□□□□□ -1.84
CD44-213ENST00000525209 NEIL3Q8TAT5 605 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms