RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 GPX8Q8TED1 209 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 RORBQ92753 470 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 GTF2H4Q92759 462 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 TEX37Q96LM6 180 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 RNF145Q96MT1 663 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 WFIKKN1Q96NZ8 548 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 TRIB3Q96RU7 358 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 PLA2G2FQ9BZM2 168 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 TMEM38AQ9H6F2 299 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 NLE1Q9NVX2 485 aaPredicted RBP3.85□□□□□ -1.79
SKP1-213ENST00000524288 RBM22Q9NW64 420 aaKnown RBP eCLIP3.85□□□□□ -1.798e-8■■■■□ 22.7
SKP1-213ENST00000524288 ANAPC11Q9NYG5 84 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 CD84Q9UIB8 345 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 ZNF223Q9UK11 482 aaPredicted RBP3.85□□□□□ -1.79
SKP1-213ENST00000524288 TPRKBQ9Y3C4 175 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 SNX10Q9Y5X0 201 aa3.85□□□□□ -1.79
SKP1-213ENST00000524288 HELZP42694 1942 aaKnown RBP3.85□□□□□ -1.79
SKP1-213ENST00000524288 MTCL1Q9Y4B5 1905 aaKnown RBP3.85□□□□□ -1.79
SKP1-213ENST00000524288 KCNE1BA0A087WTH5 132 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 A0A096LPI6 279 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 IGHV3-64DA0A0J9YX35 117 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 PINLYPA6NC86 204 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 CENPBD1B2RD01 187 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 CXCR6O00574 342 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 PRMT5O14744 637 aaPredicted RBP3.84□□□□□ -1.79
SKP1-213ENST00000524288 KCNK2O95069 426 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 IGLV3-27P01718 113 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 ZDHHC11BP0C7U3 371 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 LINC00032P0C843 101 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 ZNF286BP0CG31 522 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 CTRB1P17538 263 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 HOXA9P31269 272 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 NBL1P41271 181 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 UBE2AP49459 152 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 ZNF138P52744 262 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 RAD51Q06609 339 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 MADCAM1Q13477 382 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 IHHQ14623 411 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 MAD2L1BPQ15013 274 aaPredicted RBP3.84□□□□□ -1.79
SKP1-213ENST00000524288 PON2Q15165 354 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 MPPED2Q15777 294 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 GABRA6Q16445 453 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 IMPG1Q17R60 797 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 ZNF404Q494X3 552 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 ZNF658BQ4V348 819 aaPredicted RBP3.84□□□□□ -1.79
SKP1-213ENST00000524288 ATP6AP1LQ52LC2 224 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 FAHD1Q6P587 224 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 PLET1Q6UQ28 207 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 SPESP1Q6UW49 350 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 FAM9CQ8IZT9 166 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 FAM86B1Q8N7N1 296 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 Q8N7P7 452 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 LRRC75AQ8NAA5 344 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 MDS2Q8NDY4 140 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 OR4S2Q8NH73 311 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 GLYATL2Q8WU03 294 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 ZNF799Q96GE5 643 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 ZNF414Q96IQ9 312 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 PPP3R2Q96LZ3 170 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 SERPINB11Q96P15 392 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 ACBD6Q9BR61 282 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 MED10Q9BTT4 135 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 CCDC32Q9BV29 185 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 KRTAP4-3Q9BYR4 195 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 PIGUQ9H490 435 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 ACOT13Q9NPJ3 140 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 C1orf109Q9NX04 203 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 TAS2R13Q9NYV9 303 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 OPTCQ9UBM4 332 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 PSG8Q9UQ74 426 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 ORC6Q9Y5N6 252 aa3.84□□□□□ -1.79
SKP1-213ENST00000524288 DOCK3Q8IZD9 2030 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 IGLV1-36A0A0B4J1U3 117 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 MYBPHLA2RUH7 354 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 OR51F1A6NGY5 319 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 EVPLLA8MZ36 301 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 L7N2F9 121 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 MYO1DO94832 1006 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 RAB3DO95716 219 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 IL6P05231 212 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 SMIM10L2AP0DMW4 78 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 SMIM10L2BP0DMW5 78 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 PSG2P11465 335 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 NR2C1P13056 603 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 RPS3P23396 243 aaKnown RBP eCLIP3.83□□□□□ -1.86e-15■□□□□ 10.6
SKP1-213ENST00000524288 SLC11A1P49279 550 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 MTPNP58546 118 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 RAB11AP62491 216 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 ZNF266Q14584 549 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 TAF1AQ15573 450 aaPredicted RBP3.83□□□□□ -1.8
SKP1-213ENST00000524288 TSNQ15631 228 aaKnown RBP3.83□□□□□ -1.8
SKP1-213ENST00000524288 RAB11BQ15907 218 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 CDKL4Q5MAI5 379 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 TMEM236Q5W0B7 351 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 OR2T5Q6IEZ7 315 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 ABHD13Q7L211 337 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 OR2T29Q8NH02 315 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 MCFD2Q8NI22 146 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 OR51E1Q8TCB6 317 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 CD200R1Q8TD46 325 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms