RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 OR11H6Q8NGC7 330 aa13.16□□□□□ -0.3
CLN8-206ENST00000523237 TSEN15Q8WW01 171 aaKnown RBP13.16□□□□□ -0.3
CLN8-206ENST00000523237 JAM3Q9BX67 310 aa13.16□□□□□ -0.3
CLN8-206ENST00000523237 TCF7L1Q9HCS4 588 aa13.16□□□□□ -0.3
CLN8-206ENST00000523237 FGF20Q9NP95 211 aaPredicted RBP13.16□□□□□ -0.3
CLN8-206ENST00000523237 FUOMA2VDF0 154 aa13.15□□□□□ -0.3
CLN8-206ENST00000523237 VGLL3A8MV65 326 aa13.15□□□□□ -0.3
CLN8-206ENST00000523237 ODF3BA8MYP8 253 aa13.15□□□□□ -0.3
CLN8-206ENST00000523237 SIRPB1O00241 398 aa13.15□□□□□ -0.3
CLN8-206ENST00000523237 WBP4O75554 376 aaKnown RBP13.15□□□□□ -0.3
CLN8-206ENST00000523237 OR2H2O95918 312 aa13.15□□□□□ -0.3
CLN8-206ENST00000523237 LIMS3P0CW19 117 aa13.15□□□□□ -0.3
CLN8-206ENST00000523237 LIMS4P0CW20 117 aa13.15□□□□□ -0.3
CLN8-206ENST00000523237 TMEM225BP0DP42 221 aa13.15□□□□□ -0.3
CLN8-206ENST00000523237 GABRA5P31644 462 aa13.15□□□□□ -0.3
CLN8-206ENST00000523237 OR3A1P47881 315 aa13.15□□□□□ -0.3
CLN8-206ENST00000523237 P2RX3P56373 397 aa13.15□□□□□ -0.3
CLN8-206ENST00000523237 DYNC1I2Q13409 638 aaKnown RBP13.15□□□□□ -0.3
CLN8-206ENST00000523237 KISS1Q15726 138 aa13.15□□□□□ -0.3
CLN8-206ENST00000523237 SMN1Q16637 294 aaKnown RBP13.15□□□□□ -0.3
CLN8-206ENST00000523237 RNF144BQ7Z419 303 aa13.15□□□□□ -0.3
CLN8-206ENST00000523237 TRAPPC6BQ86SZ2 158 aa13.15□□□□□ -0.3
CLN8-206ENST00000523237 OR4C13Q8NGP0 309 aa13.15□□□□□ -0.3
CLN8-206ENST00000523237 MALSU1Q96EH3 234 aa13.15□□□□□ -0.3
CLN8-206ENST00000523237 CPNE2Q96FN4 548 aaPredicted RBP13.15□□□□□ -0.3
CLN8-206ENST00000523237 FBLN5Q9UBX5 448 aa13.15□□□□□ -0.3
CLN8-206ENST00000523237 UBE2J1Q9Y385 318 aaPredicted RBP13.15□□□□□ -0.3
CLN8-206ENST00000523237 SESN1Q9Y6P5 492 aa13.15□□□□□ -0.3
CLN8-206ENST00000523237 IRGMA1A4Y4 181 aa13.14□□□□□ -0.31
CLN8-206ENST00000523237 MAGEB3O15480 346 aa13.14□□□□□ -0.31
CLN8-206ENST00000523237 ZNF44P15621 663 aa13.14□□□□□ -0.31
CLN8-206ENST00000523237 LMO1P25800 156 aa13.14□□□□□ -0.31
CLN8-206ENST00000523237 DCKP27707 260 aa13.14□□□□□ -0.31
CLN8-206ENST00000523237 CCDC58Q4VC31 144 aa13.14□□□□□ -0.31
CLN8-206ENST00000523237 ZNF691Q5VV52 312 aa13.14□□□□□ -0.31
CLN8-206ENST00000523237 CRIP3Q6Q6R5 217 aa13.14□□□□□ -0.31
CLN8-206ENST00000523237 TMPRSS11AQ6ZMR5 421 aa13.14□□□□□ -0.31
CLN8-206ENST00000523237 DTX3Q8N9I9 347 aa13.14□□□□□ -0.31
CLN8-206ENST00000523237 CHST4Q8NCG5 386 aa13.14□□□□□ -0.31
CLN8-206ENST00000523237 PIFOQ8TCI5 191 aa13.14□□□□□ -0.31
CLN8-206ENST00000523237 GAL3ST2Q9H3Q3 398 aa13.14□□□□□ -0.31
CLN8-206ENST00000523237 RANBP3Q9H6Z4 567 aaPredicted RBP13.14□□□□□ -0.31
CLN8-206ENST00000523237 C8orf4Q9NR00 106 aa13.14□□□□□ -0.31
CLN8-206ENST00000523237 ABCB10Q9NRK6 738 aa13.14□□□□□ -0.31
CLN8-206ENST00000523237 TRGV10A0A0A0MS01 117 aa13.13□□□□□ -0.31
CLN8-206ENST00000523237 RAB3AP20336 220 aa13.13□□□□□ -0.31
CLN8-206ENST00000523237 KIR2DS4P43632 304 aa13.13□□□□□ -0.31
CLN8-206ENST00000523237 GTF2A1P52655 376 aaPredicted RBP13.13□□□□□ -0.31
CLN8-206ENST00000523237 ZP1P60852 638 aa13.13□□□□□ -0.31
CLN8-206ENST00000523237 SCN1BQ07699 218 aa13.13□□□□□ -0.31
CLN8-206ENST00000523237 FAM189A2Q15884 450 aa13.13□□□□□ -0.31
CLN8-206ENST00000523237 SSX2Q16385 188 aa13.13□□□□□ -0.31
CLN8-206ENST00000523237 LRRC36Q1X8D7 754 aa13.13□□□□□ -0.31
CLN8-206ENST00000523237 PLA1AQ53H76 456 aa13.13□□□□□ -0.31
CLN8-206ENST00000523237 TTC23Q5W5X9 447 aa13.13□□□□□ -0.31
CLN8-206ENST00000523237 ASPHD2Q6ICH7 369 aa13.13□□□□□ -0.31
CLN8-206ENST00000523237 RPL22L1Q6P5R6 122 aaKnown RBP13.13□□□□□ -0.31
CLN8-206ENST00000523237 C11orf88Q6PI97 169 aa13.13□□□□□ -0.31
CLN8-206ENST00000523237 DYNAPQ8N1N2 210 aa13.13□□□□□ -0.31
CLN8-206ENST00000523237 OR2T6Q8NHC8 308 aa13.13□□□□□ -0.31
CLN8-206ENST00000523237 CNIH3Q8TBE1 160 aa13.13□□□□□ -0.31
CLN8-206ENST00000523237 RPS4Y2Q8TD47 263 aa13.13□□□□□ -0.31
CLN8-206ENST00000523237 GPR148Q8TDV2 347 aa13.13□□□□□ -0.31
CLN8-206ENST00000523237 CYGBQ8WWM9 190 aa13.13□□□□□ -0.31
CLN8-206ENST00000523237 NPFFR1Q9GZQ6 430 aa13.13□□□□□ -0.31
CLN8-206ENST00000523237 TMEM133Q9H2Q1 129 aa13.13□□□□□ -0.31
CLN8-206ENST00000523237 TRRAPQ9Y4A5 3859 aa13.13□□□□□ -0.31
CLN8-206ENST00000523237 MEGF8Q7Z7M0 2845 aa13.12□□□□□ -0.31
CLN8-206ENST00000523237 KIAA2026Q5HYC2 2103 aa13.12□□□□□ -0.31
CLN8-206ENST00000523237 TET2Q6N021 2002 aaPredicted RBP13.12□□□□□ -0.31
CLN8-206ENST00000523237 IGHV2-26A0A0B4J1V2 119 aa13.12□□□□□ -0.31
CLN8-206ENST00000523237 A0A0G2JK05 382 aa13.12□□□□□ -0.31
CLN8-206ENST00000523237 CLIC3O95833 236 aa13.12□□□□□ -0.31
CLN8-206ENST00000523237 CSN2P05814 226 aa13.12□□□□□ -0.31
CLN8-206ENST00000523237 CD2P06729 351 aa13.12□□□□□ -0.31
CLN8-206ENST00000523237 MYL12AP19105 171 aa13.12□□□□□ -0.31
CLN8-206ENST00000523237 SOX2P48431 317 aa13.12□□□□□ -0.31
CLN8-206ENST00000523237 ETV1P50549 477 aa13.12□□□□□ -0.31
CLN8-206ENST00000523237 IL18R1Q13478 541 aa13.12□□□□□ -0.31
CLN8-206ENST00000523237 CDK5R1Q15078 307 aa13.12□□□□□ -0.31
CLN8-206ENST00000523237 MINOS1Q5TGZ0 78 aa13.12□□□□□ -0.31
CLN8-206ENST00000523237 PACRGLQ8N7B6 248 aa13.12□□□□□ -0.31
CLN8-206ENST00000523237 SETD9Q8NE22 299 aa13.12□□□□□ -0.31
CLN8-206ENST00000523237 GPER1Q99527 375 aa13.12□□□□□ -0.31
CLN8-206ENST00000523237 CDCA4Q9BXL8 241 aa13.12□□□□□ -0.31
CLN8-206ENST00000523237 CLEC7AQ9BXN2 247 aa13.12□□□□□ -0.31
CLN8-206ENST00000523237 MMP27Q9H306 513 aa13.12□□□□□ -0.31
CLN8-206ENST00000523237 TAS2R3Q9NYW6 316 aa13.12□□□□□ -0.31
CLN8-206ENST00000523237 PITPNC1Q9UKF7 332 aa13.12□□□□□ -0.31
CLN8-206ENST00000523237 TCF19Q9Y242 345 aa13.12□□□□□ -0.31
CLN8-206ENST00000523237 MINOS1-NBL1R4GNA1 71 aa13.12□□□□□ -0.31
CLN8-206ENST00000523237 DEGS1O15121 323 aa13.11□□□□□ -0.31
CLN8-206ENST00000523237 CHST1O43916 411 aa13.11□□□□□ -0.31
CLN8-206ENST00000523237 GLIPR1P48060 266 aa13.11□□□□□ -0.31
CLN8-206ENST00000523237 MTNR1BP49286 362 aa13.11□□□□□ -0.31
CLN8-206ENST00000523237 EFNB2P52799 333 aa13.11□□□□□ -0.31
CLN8-206ENST00000523237 AESQ08117 197 aa13.11□□□□□ -0.31
CLN8-206ENST00000523237 MED21Q13503 144 aa13.11□□□□□ -0.31
CLN8-206ENST00000523237 LDLRAD2Q5SZI1 272 aa13.11□□□□□ -0.31
CLN8-206ENST00000523237 OR2G6Q5TZ20 316 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms