RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 OR4D6Q8NGJ1 314 aa6.95□□□□□ -1.3
VPS13B-210ENST00000521932 OR51T1Q8NGJ9 327 aa6.95□□□□□ -1.3
VPS13B-210ENST00000521932 TBC1D15Q8TC07 691 aa6.95□□□□□ -1.3
VPS13B-210ENST00000521932 TNFAIP8L1Q8WVP5 186 aa6.95□□□□□ -1.3
VPS13B-210ENST00000521932 SLC25A28Q96A46 364 aa6.95□□□□□ -1.3
VPS13B-210ENST00000521932 C20orf173Q96LM9 149 aa6.95□□□□□ -1.3
VPS13B-210ENST00000521932 C1orf147Q96MC9 270 aaPredicted RBP6.95□□□□□ -1.3
VPS13B-210ENST00000521932 ZNF488Q96MN9 340 aa6.95□□□□□ -1.3
VPS13B-210ENST00000521932 GAL3ST1Q99999 423 aa6.95□□□□□ -1.3
VPS13B-210ENST00000521932 METTL9Q9H1A3 318 aa6.95□□□□□ -1.3
VPS13B-210ENST00000521932 RNF167Q9H6Y7 350 aa6.95□□□□□ -1.3
VPS13B-210ENST00000521932 ZNF665Q9H7R5 613 aa6.95□□□□□ -1.3
VPS13B-210ENST00000521932 EXOSC4Q9NPD3 245 aaKnown RBP6.95□□□□□ -1.3
VPS13B-210ENST00000521932 PCDHB16Q9NRJ7 776 aa6.95□□□□□ -1.3
VPS13B-210ENST00000521932 DNAJB11Q9UBS4 358 aa6.95□□□□□ -1.3
VPS13B-210ENST00000521932 FBLN5Q9UBX5 448 aa6.95□□□□□ -1.3
VPS13B-210ENST00000521932 ZNF222Q9UK12 451 aa6.95□□□□□ -1.3
VPS13B-210ENST00000521932 AK6Q9Y3D8 172 aaKnown RBP6.95□□□□□ -1.3
VPS13B-210ENST00000521932 V9GY05 133 aa6.95□□□□□ -1.3
VPS13B-210ENST00000521932 TEX15Q9BXT5 2789 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 IGHV3OR15-7A0A075B7D8 119 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 LOC100506127A0A0U1RQW1 187 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 ISPDA4D126 451 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 RFPL4AA6NLU0 287 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 RFPL4AL1F8VTS6 287 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 H7C1Q1 480 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 SLC17A2O00624 439 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 TMEM127O75204 238 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 GABARAPO95166 117 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 CDRT1O95170 752 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 GYPAP02724 150 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 HEXAP06865 529 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 UBBP0CG47 229 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 RAB3BP20337 219 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 LMO1P25800 156 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 HTR2CP28335 458 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 IL2RGP31785 369 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 PRDX2P32119 198 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 SDC2P34741 201 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 RANBP1P43487 201 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 NPY4RP50391 375 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 FGF12P61328 243 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 RSU1Q15404 277 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 CTF1Q16619 201 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 SMIM21Q3B7S5 101 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 NHLRC3Q5JS37 347 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 SPIN3Q5JUX0 258 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 AWAT2Q6E213 333 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 GLIPR1L1Q6UWM5 242 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 LYPD2Q6UXB3 125 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 SLC16A12Q6ZSM3 486 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 ZNF561Q8N587 486 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 CLRN3Q8NCR9 226 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 OR6M1Q8NGM8 313 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 EMG1Q92979 244 aaKnown RBP6.94□□□□□ -1.3
VPS13B-210ENST00000521932 RAB39BQ96DA2 213 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 MRPS24Q96EL2 167 aaKnown RBP6.94□□□□□ -1.3
VPS13B-210ENST00000521932 SDSLQ96GA7 329 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 MED30Q96HR3 178 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 C18orf12Q96KH6 178 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 S100A13Q99584 98 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 NKX3-1Q99801 234 aaPredicted RBP6.94□□□□□ -1.3
VPS13B-210ENST00000521932 FAM192AQ9GZU8 254 aa6.94□□□□□ -1.3
VPS13B-210ENST00000521932 RBFOX1Q9NWB1 397 aaKnown RBP6.94□□□□□ -1.3
VPS13B-210ENST00000521932 MRPS28Q9Y2Q9 187 aaKnown RBP6.94□□□□□ -1.3
VPS13B-210ENST00000521932 CCDC168Q8NDH2 2452 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 MAP1AP78559 2803 aaPredicted RBP6.93□□□□□ -1.3
VPS13B-210ENST00000521932 A0A0G2JK05 382 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 IFITM5A6NNB3 132 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 AIPO00170 330 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 SH2D1BO14796 132 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 SIGLEC5O15389 551 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 FCN3O75636 299 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 IL1AP01583 271 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 CSTBP04080 98 aaKnown RBP6.93□□□□□ -1.3
VPS13B-210ENST00000521932 CHRM2P08172 466 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 GTF2F2P13984 249 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 CD99P14209 185 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 PRKACAP17612 351 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 HOXA5P20719 270 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 TMBIM6P55061 237 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 OR10A3P58181 314 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 GMFBP60983 142 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 QRFPP83859 136 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 DGUOKQ16854 277 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 TMEM249Q2WGJ8 235 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 GPR107Q5VW38 600 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 FIP1L1Q6UN15 594 aaKnown RBP6.93□□□□□ -1.3
VPS13B-210ENST00000521932 SLC36A1Q7Z2H8 476 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 BATF2Q8N1L9 274 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 OSR2Q8N2R0 312 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 CD177Q8N6Q3 437 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 NEIL1Q96FI4 390 aaPredicted RBP6.93□□□□□ -1.3
VPS13B-210ENST00000521932 CCL13Q99616 98 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 BCL7BQ9BQE9 202 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 NARFLQ9H6Q4 476 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 CTSZQ9UBR2 303 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 STEAP1Q9UHE8 339 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 GLS2Q9UI32 602 aa6.93□□□□□ -1.3
VPS13B-210ENST00000521932 ING4Q9UNL4 249 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms