RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 INHBBP09529 407 aa14.3□□□□□ -0.12
USP42-207ENST00000521713 PTTG1IPP53801 180 aa14.3□□□□□ -0.12
USP42-207ENST00000521713 KRTCAP3Q53RY4 240 aa14.3□□□□□ -0.12
USP42-207ENST00000521713 PIK3IP1Q96FE7 263 aa14.3□□□□□ -0.12
USP42-207ENST00000521713 PRO1933Q9H354 126 aa14.3□□□□□ -0.12
USP42-207ENST00000521713 IGKV1-8A0A0C4DH67 115 aa14.3□□□□□ -0.12
USP42-207ENST00000521713 PTBP3O95758 552 aaKnown RBP14.3□□□□□ -0.12
USP42-207ENST00000521713 CD96P40200 585 aa14.3□□□□□ -0.12
USP42-207ENST00000521713 PPP1R1AQ13522 171 aa14.3□□□□□ -0.12
USP42-207ENST00000521713 C1QL3Q5VWW1 255 aa14.3□□□□□ -0.12
USP42-207ENST00000521713 CLDN23Q96B33 292 aa14.3□□□□□ -0.12
USP42-207ENST00000521713 GMPPAQ96IJ6 420 aaPredicted RBP14.3□□□□□ -0.12
USP42-207ENST00000521713 Q9N2K0 584 aa14.3□□□□□ -0.12
USP42-207ENST00000521713 GREB1LQ9C091 1923 aaPredicted RBP14.3□□□□□ -0.12
USP42-207ENST00000521713 PPIHO43447 177 aaKnown RBP14.3□□□□□ -0.12
USP42-207ENST00000521713 CD200P41217 278 aa14.3□□□□□ -0.12
USP42-207ENST00000521713 TRAT1Q6PIZ9 186 aa14.3□□□□□ -0.12
USP42-207ENST00000521713 NMES1Q9C002 83 aa14.3□□□□□ -0.12
USP42-207ENST00000521713 C7orf66A4D0T2 115 aa14.3□□□□□ -0.12
USP42-207ENST00000521713 SLC25A30Q5SVS4 291 aa14.3□□□□□ -0.12
USP42-207ENST00000521713 ZAR1Q86SH2 424 aa14.3□□□□□ -0.12
USP42-207ENST00000521713 ABHD1Q96SE0 405 aa14.3□□□□□ -0.12
USP42-207ENST00000521713 IFI6P09912 130 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 TMEM37Q8WXS4 190 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 RAB40CQ96S21 281 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 OR5V1Q9UGF6 321 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 NUP214P35658 2090 aaPredicted RBP14.29□□□□□ -0.12
USP42-207ENST00000521713 CTAG2O75638 210 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 SLC25A4P12235 298 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 BPIFB3P59826 476 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 ZNF345Q14585 488 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 LGALSLQ3ZCW2 172 aaPredicted RBP14.29□□□□□ -0.12
USP42-207ENST00000521713 AWAT1Q58HT5 328 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 DGAT2L6Q6ZPD8 337 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 ORAI1Q96D31 301 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 OPN4Q9UHM6 478 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 MFNGO00587 321 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 PMS2P11Q13670 270 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 ETFDHQ16134 617 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 NHLRC1Q6VVB1 395 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 TTTY12Q9BZ98 90 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 CXXC4Q9H2H0 198 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 TAAR3PQ9P1P4 343 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 DVL1O14640 695 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 PTGFRP43088 359 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 SELENOPP49908 381 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 GNB1P62873 340 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 IRF3Q14653 427 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 WDR73Q6P4I2 378 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 NTMQ9P121 344 aa14.29□□□□□ -0.12
USP42-207ENST00000521713 DUXBA0A1W2PPF3 345 aa14.28□□□□□ -0.12
USP42-207ENST00000521713 NGFP01138 241 aa14.28□□□□□ -0.12
USP42-207ENST00000521713 SURF2Q15527 256 aaPredicted RBP14.28□□□□□ -0.12
USP42-207ENST00000521713 OR5D13Q8NGL4 314 aa14.28□□□□□ -0.12
USP42-207ENST00000521713 CCL17Q92583 94 aa14.28□□□□□ -0.12
USP42-207ENST00000521713 NOL4LQ96MY1 436 aaPredicted RBP14.28□□□□□ -0.12
USP42-207ENST00000521713 TMEM74BQ9NUR3 256 aa14.28□□□□□ -0.12
USP42-207ENST00000521713 FAM186AA6NE01 2351 aa14.28□□□□□ -0.12
USP42-207ENST00000521713 IGHV1-45A0A0A0MS14 117 aa14.28□□□□□ -0.12
USP42-207ENST00000521713 ARL16Q0P5N6 197 aa14.28□□□□□ -0.12
USP42-207ENST00000521713 CXorf67Q86X51 503 aaPredicted RBP14.28□□□□□ -0.12
USP42-207ENST00000521713 C17orf78Q8N4C9 275 aa14.28□□□□□ -0.12
USP42-207ENST00000521713 PLA2G10O15496 165 aa14.28□□□□□ -0.12
USP42-207ENST00000521713 CSN1S1P47710 185 aa14.28□□□□□ -0.12
USP42-207ENST00000521713 C3AR1Q16581 482 aa14.28□□□□□ -0.12
USP42-207ENST00000521713 CLEC18AA5D8T8 446 aa14.27□□□□□ -0.12
USP42-207ENST00000521713 C16orf97H3BN30 126 aa14.27□□□□□ -0.12
USP42-207ENST00000521713 GLI4P10075 376 aa14.27□□□□□ -0.12
USP42-207ENST00000521713 MVDP53602 400 aa14.27□□□□□ -0.12
USP42-207ENST00000521713 ZNF154Q13106 437 aa14.27□□□□□ -0.12
USP42-207ENST00000521713 OR2B11Q5JQS5 317 aa14.27□□□□□ -0.12
USP42-207ENST00000521713 CLEC18CQ8NCF0 446 aa14.27□□□□□ -0.12
USP42-207ENST00000521713 SLC26A10Q8NG04 563 aa14.27□□□□□ -0.12
USP42-207ENST00000521713 PACRGQ96M98 296 aaPredicted RBP14.27□□□□□ -0.12
USP42-207ENST00000521713 TPPP3Q9BW30 176 aa14.27□□□□□ -0.12
USP42-207ENST00000521713 SMDT1Q9H4I9 107 aa14.27□□□□□ -0.12
USP42-207ENST00000521713 SLC25A6P12236 298 aa14.27□□□□□ -0.12
USP42-207ENST00000521713 MDH2P40926 338 aaKnown RBP14.27□□□□□ -0.12
USP42-207ENST00000521713 FBXW9Q5XUX1 488 aa14.27□□□□□ -0.12
USP42-207ENST00000521713 INO80CQ6PI98 192 aaPredicted RBP14.27□□□□□ -0.12
USP42-207ENST00000521713 LYPD8Q6UX82 237 aa14.27□□□□□ -0.12
USP42-207ENST00000521713 GNB4Q9HAV0 340 aa14.27□□□□□ -0.12
USP42-207ENST00000521713 RBBP6Q7Z6E9 1792 aaKnown RBP14.27□□□□□ -0.12
USP42-207ENST00000521713 CDRT15L2A8MXV6 281 aa14.27□□□□□ -0.13
USP42-207ENST00000521713 YIF1AO95070 293 aa14.27□□□□□ -0.13
USP42-207ENST00000521713 GPANK1O95872 356 aa14.27□□□□□ -0.13
USP42-207ENST00000521713 IGLV3-19P01714 112 aa14.27□□□□□ -0.13
USP42-207ENST00000521713 MBPP02686 304 aaPredicted RBP14.27□□□□□ -0.13
USP42-207ENST00000521713 CRYBA1P05813 215 aa14.27□□□□□ -0.13
USP42-207ENST00000521713 PATE4P0C8F1 98 aa14.27□□□□□ -0.13
USP42-207ENST00000521713 LRRC29Q8WV35 223 aa14.27□□□□□ -0.13
USP42-207ENST00000521713 MIXL1Q9H2W2 232 aa14.27□□□□□ -0.13
USP42-207ENST00000521713 A0A1W2PQM1 296 aa14.27□□□□□ -0.13
USP42-207ENST00000521713 CCL21O00585 134 aa14.27□□□□□ -0.13
USP42-207ENST00000521713 FBP1P09467 338 aa14.27□□□□□ -0.13
USP42-207ENST00000521713 CEBPEQ15744 281 aa14.27□□□□□ -0.13
USP42-207ENST00000521713 ETFRF1Q6IPR1 90 aa14.27□□□□□ -0.13
USP42-207ENST00000521713 OR52N4Q8NGI2 321 aa14.27□□□□□ -0.13
USP42-207ENST00000521713 CDX4O14627 284 aaPredicted RBP14.26□□□□□ -0.13
USP42-207ENST00000521713 NKX2-8O15522 239 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms